EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000001888 (Gene tree)
Gene ID: 102346274
Gene Symbol: rrp36
Alias: cb268|sb:cb268|si:dkey-236e20.6
Full Name: ribosomal RNA processing 36
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 14410 bases
Position: chrJH131583.1:33320-47729
Accession: 102346274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002111	RRP36	PF06102.12	5.5e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002127	-	957	XM_006013829	ENSLACP00000002111	318 (aa)	XP_006013891	H2ZXJ0

Gene Model

Click here to download ENSLACG00000001888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001888	rrp36	65	55.607	ENSG00000124541	RRP36	76	77.273	Homo_sapiens
ENSLACG00000001888	rrp36	65	65.072	ENSAPOG00000022015	rrp36	94	54.074	Acanthochromis_polyacanthus
ENSLACG00000001888	rrp36	71	61.674	ENSACIG00000020578	-	91	48.344	Amphilophus_citrinellus
ENSLACG00000001888	rrp36	66	66.825	ENSAOCG00000013439	rrp36	94	52.459	Amphiprion_ocellaris
ENSLACG00000001888	rrp36	66	66.825	ENSAPEG00000020996	rrp36	94	52.787	Amphiprion_percula
ENSLACG00000001888	rrp36	66	62.559	ENSATEG00000016946	rrp36	91	50.955	Anabas_testudineus
ENSLACG00000001888	rrp36	65	56.604	ENSANAG00000021773	RRP36	82	56.604	Aotus_nancymaae
ENSLACG00000001888	rrp36	69	57.014	ENSACLG00000008408	rrp36	93	57.014	Astatotilapia_calliptera
ENSLACG00000001888	rrp36	65	52.358	ENSACLG00000013982	RRP36	85	50.943	Astatotilapia_calliptera
ENSLACG00000001888	rrp36	77	52.209	ENSBTAG00000053873	RRP36	97	51.600	Bos_taurus
ENSLACG00000001888	rrp36	65	55.660	ENSCJAG00000004943	RRP36	83	55.660	Callithrix_jacchus
ENSLACG00000001888	rrp36	68	56.164	ENSCAFG00020011057	RRP36	91	57.075	Canis_lupus_dingo
ENSLACG00000001888	rrp36	65	45.540	ENSCHIG00000019781	-	85	44.601	Capra_hircus
ENSLACG00000001888	rrp36	61	55.000	ENSCHIG00000003210	-	88	55.000	Capra_hircus
ENSLACG00000001888	rrp36	65	58.019	ENSCHIG00000016354	-	83	57.277	Capra_hircus
ENSLACG00000001888	rrp36	65	56.604	ENSTSYG00000037176	RRP36	83	56.604	Carlito_syrichta
ENSLACG00000001888	rrp36	65	56.039	ENSCAPG00000010983	RRP36	90	56.039	Cavia_aperea
ENSLACG00000001888	rrp36	69	54.338	ENSCPOG00000025932	RRP36	98	54.338	Cavia_porcellus
ENSLACG00000001888	rrp36	65	57.075	ENSCCAG00000000048	RRP36	82	57.075	Cebus_capucinus
ENSLACG00000001888	rrp36	65	56.132	ENSCATG00000041903	RRP36	82	56.132	Cercocebus_atys
ENSLACG00000001888	rrp36	68	54.338	ENSCLAG00000013166	RRP36	97	54.338	Chinchilla_lanigera
ENSLACG00000001888	rrp36	65	56.132	ENSCSAG00000011553	RRP36	82	56.132	Chlorocebus_sabaeus
ENSLACG00000001888	rrp36	75	58.848	ENSCPBG00000003555	RRP36	72	56.654	Chrysemys_picta_bellii
ENSLACG00000001888	rrp36	76	36.948	ENSCING00000012193	-	83	38.967	Ciona_intestinalis
ENSLACG00000001888	rrp36	53	39.080	ENSCSAVG00000002672	-	91	37.143	Ciona_savignyi
ENSLACG00000001888	rrp36	65	56.132	ENSCANG00000035127	RRP36	83	56.132	Colobus_angolensis_palliatus
ENSLACG00000001888	rrp36	65	57.212	ENSCGRG00001021461	Rrp36	92	57.212	Cricetulus_griseus_chok1gshd
ENSLACG00000001888	rrp36	65	57.212	ENSCGRG00000006286	Rrp36	92	57.212	Cricetulus_griseus_crigri
ENSLACG00000001888	rrp36	66	63.507	ENSCSEG00000001039	RRP36	80	55.556	Cynoglossus_semilaevis
ENSLACG00000001888	rrp36	65	51.628	ENSCVAG00000017798	rrp36	92	51.905	Cyprinodon_variegatus
ENSLACG00000001888	rrp36	76	57.959	ENSDARG00000032516	rrp36	88	52.982	Danio_rerio
ENSLACG00000001888	rrp36	68	53.488	ENSDORG00000012186	Rrp36	91	54.545	Dipodomys_ordii
ENSLACG00000001888	rrp36	70	36.325	FBgn0038235	CG8461	98	34.940	Drosophila_melanogaster
ENSLACG00000001888	rrp36	68	56.444	ENSEASG00005003169	RRP36	93	57.547	Equus_asinus_asinus
ENSLACG00000001888	rrp36	68	56.444	ENSECAG00000040238	RRP36	93	57.547	Equus_caballus
ENSLACG00000001888	rrp36	77	44.578	ENSEEUG00000010515	RRP36	97	44.578	Erinaceus_europaeus
ENSLACG00000001888	rrp36	69	63.514	ENSELUG00000016840	rrp36	76	56.000	Esox_lucius
ENSLACG00000001888	rrp36	75	52.675	ENSFCAG00000043818	RRP36	87	55.963	Felis_catus
ENSLACG00000001888	rrp36	65	54.502	ENSFDAG00000010380	RRP36	98	54.502	Fukomys_damarensis
ENSLACG00000001888	rrp36	51	60.976	ENSFHEG00000000761	rrp36	83	60.976	Fundulus_heteroclitus
ENSLACG00000001888	rrp36	69	57.991	ENSGAFG00000017817	rrp36	76	52.381	Gambusia_affinis
ENSLACG00000001888	rrp36	73	56.170	ENSGACG00000019603	RRP36	93	48.039	Gasterosteus_aculeatus
ENSLACG00000001888	rrp36	81	56.274	ENSGAGG00000019161	RRP36	60	56.274	Gopherus_agassizii
ENSLACG00000001888	rrp36	65	56.604	ENSGGOG00000037384	RRP36	83	56.604	Gorilla_gorilla
ENSLACG00000001888	rrp36	73	59.052	ENSHBUG00000008974	RRP36	92	50.165	Haplochromis_burtoni
ENSLACG00000001888	rrp36	65	54.976	ENSHGLG00000018082	RRP36	83	54.976	Heterocephalus_glaber_female
ENSLACG00000001888	rrp36	65	54.976	ENSHGLG00100019303	RRP36	83	54.976	Heterocephalus_glaber_male
ENSLACG00000001888	rrp36	71	39.381	ENSHCOG00000010303	rrp36	89	39.381	Hippocampus_comes
ENSLACG00000001888	rrp36	76	48.387	ENSIPUG00000016548	rrp36	90	45.818	Ictalurus_punctatus
ENSLACG00000001888	rrp36	68	54.667	ENSSTOG00000009511	RRP36	95	54.667	Ictidomys_tridecemlineatus
ENSLACG00000001888	rrp36	65	57.767	ENSJJAG00000023363	Rrp36	93	57.692	Jaculus_jaculus
ENSLACG00000001888	rrp36	66	64.929	ENSKMAG00000006968	rrp36	79	56.364	Kryptolebias_marmoratus
ENSLACG00000001888	rrp36	65	56.303	ENSLBEG00000017728	-	80	51.178	Labrus_bergylta
ENSLACG00000001888	rrp36	77	61.024	ENSLOCG00000015862	RRP36	76	59.480	Lepisosteus_oculatus
ENSLACG00000001888	rrp36	65	55.399	ENSLAFG00000032704	RRP36	98	55.399	Loxodonta_africana
ENSLACG00000001888	rrp36	65	56.132	ENSMFAG00000003547	RRP36	82	56.132	Macaca_fascicularis
ENSLACG00000001888	rrp36	65	55.660	ENSMNEG00000044747	RRP36	82	55.660	Macaca_nemestrina
ENSLACG00000001888	rrp36	65	56.132	ENSMLEG00000034272	RRP36	82	56.132	Mandrillus_leucophaeus
ENSLACG00000001888	rrp36	79	51.799	ENSMAMG00000019157	-	74	55.185	Mastacembelus_armatus
ENSLACG00000001888	rrp36	73	59.914	ENSMZEG00005015204	RRP36	91	50.825	Maylandia_zebra
ENSLACG00000001888	rrp36	65	58.173	ENSMAUG00000003648	Rrp36	93	58.173	Mesocricetus_auratus
ENSLACG00000001888	rrp36	65	55.189	ENSMICG00000045230	RRP36	83	55.189	Microcebus_murinus
ENSLACG00000001888	rrp36	65	57.692	ENSMOCG00000002009	Rrp36	86	57.692	Microtus_ochrogaster
ENSLACG00000001888	rrp36	66	58.962	ENSMMOG00000018637	-	63	58.962	Mola_mola
ENSLACG00000001888	rrp36	66	65.094	ENSMALG00000008142	-	91	52.685	Monopterus_albus
ENSLACG00000001888	rrp36	65	54.327	MGP_CAROLIEiJ_G0021680	Rrp36	85	54.327	Mus_caroli
ENSLACG00000001888	rrp36	65	54.327	ENSMUSG00000023971	Rrp36	92	54.327	Mus_musculus
ENSLACG00000001888	rrp36	65	54.460	MGP_PahariEiJ_G0020671	Rrp36	92	54.460	Mus_pahari
ENSLACG00000001888	rrp36	65	55.288	MGP_SPRETEiJ_G0022592	Rrp36	85	55.288	Mus_spretus
ENSLACG00000001888	rrp36	65	56.132	ENSNLEG00000033289	RRP36	98	56.132	Nomascus_leucogenys
ENSLACG00000001888	rrp36	51	52.469	ENSMEUG00000007149	-	94	53.896	Notamacropus_eugenii
ENSLACG00000001888	rrp36	53	61.677	ENSOPRG00000002274	RRP36	68	61.677	Ochotona_princeps
ENSLACG00000001888	rrp36	70	52.889	ENSODEG00000015915	RRP36	98	52.889	Octodon_degus
ENSLACG00000001888	rrp36	69	61.261	ENSONIG00000015983	rrp36	80	58.167	Oreochromis_niloticus
ENSLACG00000001888	rrp36	69	63.303	ENSORLG00000029500	rrp36	76	57.692	Oryzias_latipes
ENSLACG00000001888	rrp36	69	62.557	ENSORLG00020017452	-	76	57.308	Oryzias_latipes_hni
ENSLACG00000001888	rrp36	69	64.220	ENSORLG00015016898	rrp36	76	58.397	Oryzias_latipes_hsok
ENSLACG00000001888	rrp36	66	63.810	ENSOMEG00000008623	RRP36	95	49.843	Oryzias_melastigma
ENSLACG00000001888	rrp36	66	53.302	ENSOGAG00000012699	RRP36	92	53.302	Otolemur_garnettii
ENSLACG00000001888	rrp36	76	40.891	ENSPPAG00000042831	-	95	42.915	Pan_paniscus
ENSLACG00000001888	rrp36	68	55.505	ENSPPRG00000014610	RRP36	87	55.505	Panthera_pardus
ENSLACG00000001888	rrp36	68	55.505	ENSPTIG00000010853	RRP36	87	55.505	Panthera_tigris_altaica
ENSLACG00000001888	rrp36	65	56.604	ENSPTRG00000018184	RRP36	81	56.604	Pan_troglodytes
ENSLACG00000001888	rrp36	65	56.132	ENSPANG00000025140	RRP36	82	56.132	Papio_anubis
ENSLACG00000001888	rrp36	81	57.088	ENSPKIG00000004303	rrp36	76	57.088	Paramormyrops_kingsleyae
ENSLACG00000001888	rrp36	65	54.502	ENSPMGG00000016870	rrp36	89	46.667	Periophthalmus_magnuspinnatus
ENSLACG00000001888	rrp36	65	56.731	ENSPEMG00000007015	Rrp36	92	56.731	Peromyscus_maniculatus_bairdii
ENSLACG00000001888	rrp36	68	54.795	ENSPCIG00000009179	RRP36	88	54.795	Phascolarctos_cinereus
ENSLACG00000001888	rrp36	69	59.633	ENSPFOG00000011959	rrp36	69	54.104	Poecilia_formosa
ENSLACG00000001888	rrp36	69	59.174	ENSPLAG00000023901	rrp36	75	53.184	Poecilia_latipinna
ENSLACG00000001888	rrp36	69	59.633	ENSPMEG00000024099	rrp36	75	54.104	Poecilia_mexicana
ENSLACG00000001888	rrp36	69	57.339	ENSPREG00000022787	rrp36	74	52.490	Poecilia_reticulata
ENSLACG00000001888	rrp36	65	56.604	ENSPPYG00000016628	RRP36	81	56.604	Pongo_abelii
ENSLACG00000001888	rrp36	65	53.081	ENSPCOG00000018401	RRP36	84	53.081	Propithecus_coquereli
ENSLACG00000001888	rrp36	66	54.884	ENSPVAG00000008714	RRP36	87	54.884	Pteropus_vampyrus
ENSLACG00000001888	rrp36	73	59.914	ENSPNYG00000018030	RRP36	92	50.825	Pundamilia_nyererei
ENSLACG00000001888	rrp36	71	58.874	ENSPNAG00000027207	rrp36	63	58.874	Pygocentrus_nattereri
ENSLACG00000001888	rrp36	65	55.769	ENSRNOG00000017836	Rrp36	85	55.769	Rattus_norvegicus
ENSLACG00000001888	rrp36	65	56.132	ENSRBIG00000040019	RRP36	82	56.132	Rhinopithecus_bieti
ENSLACG00000001888	rrp36	65	56.132	ENSRROG00000040721	RRP36	82	56.132	Rhinopithecus_roxellana
ENSLACG00000001888	rrp36	65	57.870	ENSSBOG00000030228	RRP36	84	57.870	Saimiri_boliviensis_boliviensis
ENSLACG00000001888	rrp36	90	49.697	ENSSFOG00015023058	rrp36	79	58.974	Scleropages_formosus
ENSLACG00000001888	rrp36	66	64.151	ENSSMAG00000020911	-	74	55.515	Scophthalmus_maximus
ENSLACG00000001888	rrp36	66	66.038	ENSSDUG00000018924	rrp36	76	55.797	Seriola_dumerili
ENSLACG00000001888	rrp36	64	65.700	ENSSLDG00000019741	RRP36	96	65.700	Seriola_lalandi_dorsalis
ENSLACG00000001888	rrp36	65	58.962	ENSSARG00000000873	RRP36	98	58.962	Sorex_araneus
ENSLACG00000001888	rrp36	76	60.000	ENSSPUG00000000213	RRP36	73	59.480	Sphenodon_punctatus
ENSLACG00000001888	rrp36	65	66.038	ENSSPAG00000017154	rrp36	92	51.316	Stegastes_partitus
ENSLACG00000001888	rrp36	65	56.542	ENSSSCG00000001656	RRP36	84	56.542	Sus_scrofa
ENSLACG00000001888	rrp36	63	43.415	ENSSSCG00000037862	-	88	42.439	Sus_scrofa
ENSLACG00000001888	rrp36	92	49.679	ENSTRUG00000021893	rrp36	90	49.679	Takifugu_rubripes
ENSLACG00000001888	rrp36	66	60.190	ENSTNIG00000004741	rrp36	85	57.075	Tetraodon_nigroviridis
ENSLACG00000001888	rrp36	65	46.445	ENSTBEG00000012326	RRP36	98	46.445	Tupaia_belangeri
ENSLACG00000001888	rrp36	66	56.221	ENSTTRG00000007001	RRP36	87	56.221	Tursiops_truncatus
ENSLACG00000001888	rrp36	69	53.540	ENSUAMG00000015865	RRP36	87	54.884	Ursus_americanus
ENSLACG00000001888	rrp36	50	61.250	ENSUMAG00000008726	RRP36	98	61.250	Ursus_maritimus
ENSLACG00000001888	rrp36	65	57.547	ENSVPAG00000008904	RRP36	98	57.547	Vicugna_pacos
ENSLACG00000001888	rrp36	68	56.621	ENSVVUG00000027816	RRP36	91	57.547	Vulpes_vulpes
ENSLACG00000001888	rrp36	69	57.534	ENSXCOG00000011238	rrp36	89	50.239	Xiphophorus_couchianus
ENSLACG00000001888	rrp36	69	57.078	ENSXMAG00000013804	rrp36	53	52.593	Xiphophorus_maculatus