EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000001892 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1037 bases
Position: chrJH132154.1:33436-34472
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002116	RVT_1	PF00078.27	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002132	-	993	-	ENSLACP00000002116	331 (aa)	-	H2ZXJ5

Gene Model

Click here to download ENSLACG00000001892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000001892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000001892	-	77	41.288	ENSLACG00000002249	-	100	41.288
ENSLACG00000001892	-	83	31.597	ENSLACG00000012109	-	50	31.597
ENSLACG00000001892	-	64	35.714	ENSLACG00000010227	-	92	35.714
ENSLACG00000001892	-	54	30.102	ENSLACG00000000714	-	99	30.102
ENSLACG00000001892	-	52	34.239	ENSLACG00000010373	-	77	34.239
ENSLACG00000001892	-	63	45.249	ENSLACG00000016284	-	100	45.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000001892	-	91	33.861	ENSAPOG00000008925	-	87	33.861	Acanthochromis_polyacanthus
ENSLACG00000001892	-	92	31.965	ENSAPEG00000006765	-	52	31.965	Amphiprion_percula
ENSLACG00000001892	-	90	35.783	ENSAPEG00000005752	-	73	35.783	Amphiprion_percula
ENSLACG00000001892	-	86	31.561	ENSACLG00000006549	-	82	31.561	Astatotilapia_calliptera
ENSLACG00000001892	-	79	33.091	ENSACLG00000013847	-	63	33.091	Astatotilapia_calliptera
ENSLACG00000001892	-	82	52.313	ENSACLG00000010403	-	92	52.313	Astatotilapia_calliptera
ENSLACG00000001892	-	93	31.988	ENSACLG00000009861	-	64	31.988	Astatotilapia_calliptera
ENSLACG00000001892	-	85	33.125	ENSACLG00000006798	-	99	33.438	Astatotilapia_calliptera
ENSLACG00000001892	-	86	33.333	ENSACLG00000021935	-	91	33.333	Astatotilapia_calliptera
ENSLACG00000001892	-	91	36.129	ENSACLG00000020385	-	53	36.129	Astatotilapia_calliptera
ENSLACG00000001892	-	74	34.241	ENSACLG00000013289	-	76	34.241	Astatotilapia_calliptera
ENSLACG00000001892	-	90	34.295	ENSACLG00000001380	-	53	34.295	Astatotilapia_calliptera
ENSLACG00000001892	-	83	35.069	ENSAMXG00000029182	-	72	35.069	Astyanax_mexicanus
ENSLACG00000001892	-	93	52.025	ENSAMXG00000043469	-	70	52.025	Astyanax_mexicanus
ENSLACG00000001892	-	89	35.806	ENSAMXG00000038502	-	62	35.806	Astyanax_mexicanus
ENSLACG00000001892	-	89	33.115	ENSAMXG00000039106	-	59	33.770	Astyanax_mexicanus
ENSLACG00000001892	-	79	37.050	ENSAMXG00000031032	-	74	37.050	Astyanax_mexicanus
ENSLACG00000001892	-	92	35.331	ENSCPBG00000001119	-	69	35.647	Chrysemys_picta_bellii
ENSLACG00000001892	-	78	34.432	ENSCPBG00000001687	-	89	34.432	Chrysemys_picta_bellii
ENSLACG00000001892	-	93	31.366	ENSCPBG00000001369	-	57	31.366	Chrysemys_picta_bellii
ENSLACG00000001892	-	84	32.302	ENSCVAG00000001415	-	76	32.302	Cyprinodon_variegatus
ENSLACG00000001892	-	66	34.496	ENSGAFG00000008149	-	90	34.496	Gambusia_affinis
ENSLACG00000001892	-	79	34.672	ENSGAGG00000022131	-	89	34.672	Gopherus_agassizii
ENSLACG00000001892	-	69	33.197	ENSGAGG00000022000	-	87	33.197	Gopherus_agassizii
ENSLACG00000001892	-	95	53.963	ENSGAGG00000007173	-	52	53.963	Gopherus_agassizii
ENSLACG00000001892	-	73	51.190	ENSGAGG00000011063	-	52	51.190	Gopherus_agassizii
ENSLACG00000001892	-	93	32.919	ENSGAGG00000013650	-	57	32.919	Gopherus_agassizii
ENSLACG00000001892	-	84	34.364	ENSHBUG00000009088	-	79	34.364	Haplochromis_burtoni
ENSLACG00000001892	-	86	32.333	ENSHBUG00000016445	-	56	32.333	Haplochromis_burtoni
ENSLACG00000001892	-	83	48.951	ENSHCOG00000019997	-	51	48.951	Hippocampus_comes
ENSLACG00000001892	-	96	47.130	ENSIPUG00000003645	-	68	47.130	Ictalurus_punctatus
ENSLACG00000001892	-	89	35.294	ENSKMAG00000007574	-	60	35.294	Kryptolebias_marmoratus
ENSLACG00000001892	-	81	31.373	ENSKMAG00000010799	-	84	31.373	Kryptolebias_marmoratus
ENSLACG00000001892	-	92	34.483	ENSLBEG00000003912	-	81	34.483	Labrus_bergylta
ENSLACG00000001892	-	70	31.429	ENSLOCG00000017292	-	76	31.429	Lepisosteus_oculatus
ENSLACG00000001892	-	82	34.615	ENSMAMG00000004646	-	60	34.615	Mastacembelus_armatus
ENSLACG00000001892	-	95	48.318	ENSMAMG00000019918	-	54	48.318	Mastacembelus_armatus
ENSLACG00000001892	-	92	31.871	ENSMAMG00000016004	-	51	31.871	Mastacembelus_armatus
ENSLACG00000001892	-	92	33.237	ENSMZEG00005017878	-	52	33.237	Maylandia_zebra
ENSLACG00000001892	-	89	32.362	ENSMZEG00005023829	-	61	32.362	Maylandia_zebra
ENSLACG00000001892	-	83	49.301	ENSMALG00000005075	-	90	49.301	Monopterus_albus
ENSLACG00000001892	-	77	37.638	ENSMALG00000020245	-	97	37.638	Monopterus_albus
ENSLACG00000001892	-	88	33.882	ENSNBRG00000002477	-	89	33.882	Neolamprologus_brichardi
ENSLACG00000001892	-	88	50.495	ENSNBRG00000002791	-	99	50.495	Neolamprologus_brichardi
ENSLACG00000001892	-	55	35.385	ENSORLG00000026658	-	80	35.385	Oryzias_latipes
ENSLACG00000001892	-	79	36.770	ENSORLG00000022742	-	77	36.770	Oryzias_latipes
ENSLACG00000001892	-	89	35.599	ENSORLG00000027231	-	58	35.599	Oryzias_latipes
ENSLACG00000001892	-	91	31.429	ENSORLG00000022411	-	85	31.429	Oryzias_latipes
ENSLACG00000001892	-	89	37.171	ENSORLG00000027869	-	66	37.171	Oryzias_latipes
ENSLACG00000001892	-	93	37.654	ENSORLG00020002002	-	51	37.654	Oryzias_latipes_hni
ENSLACG00000001892	-	92	39.117	ENSORLG00020016924	-	75	39.117	Oryzias_latipes_hni
ENSLACG00000001892	-	60	36.449	ENSORLG00020016252	-	56	36.449	Oryzias_latipes_hni
ENSLACG00000001892	-	75	38.697	ENSORLG00020000154	-	64	38.697	Oryzias_latipes_hni
ENSLACG00000001892	-	93	36.449	ENSORLG00020009127	-	62	36.449	Oryzias_latipes_hni
ENSLACG00000001892	-	82	36.014	ENSORLG00020002705	-	89	36.014	Oryzias_latipes_hni
ENSLACG00000001892	-	79	36.082	ENSORLG00020004454	-	73	36.082	Oryzias_latipes_hni
ENSLACG00000001892	-	84	31.058	ENSORLG00020021288	-	89	31.058	Oryzias_latipes_hni
ENSLACG00000001892	-	92	36.875	ENSORLG00020012706	-	80	36.875	Oryzias_latipes_hni
ENSLACG00000001892	-	93	33.229	ENSORLG00015008138	-	60	33.229	Oryzias_latipes_hsok
ENSLACG00000001892	-	74	36.328	ENSORLG00015021822	-	69	36.398	Oryzias_latipes_hsok
ENSLACG00000001892	-	75	36.822	ENSORLG00015009803	-	54	36.822	Oryzias_latipes_hsok
ENSLACG00000001892	-	89	38.511	ENSORLG00015010510	-	50	38.511	Oryzias_latipes_hsok
ENSLACG00000001892	-	93	32.915	ENSOMEG00000013073	-	51	32.915	Oryzias_melastigma
ENSLACG00000001892	-	89	32.686	ENSOMEG00000013479	-	50	32.686	Oryzias_melastigma
ENSLACG00000001892	-	84	30.717	ENSOMEG00000007764	-	97	30.717	Oryzias_melastigma
ENSLACG00000001892	-	93	44.860	ENSPKIG00000005406	-	54	44.860	Paramormyrops_kingsleyae
ENSLACG00000001892	-	89	34.431	ENSPKIG00000004057	-	74	34.431	Paramormyrops_kingsleyae
ENSLACG00000001892	-	92	30.372	ENSPKIG00000012990	-	50	30.372	Paramormyrops_kingsleyae
ENSLACG00000001892	-	89	37.540	ENSPKIG00000007140	-	70	37.540	Paramormyrops_kingsleyae
ENSLACG00000001892	-	91	32.945	ENSPKIG00000003982	-	66	32.945	Paramormyrops_kingsleyae
ENSLACG00000001892	-	71	45.749	ENSPKIG00000019619	-	88	45.749	Paramormyrops_kingsleyae
ENSLACG00000001892	-	92	34.277	ENSPSIG00000001249	-	90	34.277	Pelodiscus_sinensis
ENSLACG00000001892	-	93	33.436	ENSPSIG00000000193	-	63	33.436	Pelodiscus_sinensis
ENSLACG00000001892	-	51	31.868	ENSPSIG00000001531	-	96	31.868	Pelodiscus_sinensis
ENSLACG00000001892	-	93	34.783	ENSPSIG00000001197	-	78	34.783	Pelodiscus_sinensis
ENSLACG00000001892	-	75	31.679	ENSPSIG00000000367	-	60	31.679	Pelodiscus_sinensis
ENSLACG00000001892	-	73	33.984	ENSPSIG00000001816	-	95	33.984	Pelodiscus_sinensis
ENSLACG00000001892	-	93	37.152	ENSPSIG00000001205	-	69	37.152	Pelodiscus_sinensis
ENSLACG00000001892	-	60	51.429	ENSPSIG00000000007	-	53	51.429	Pelodiscus_sinensis
ENSLACG00000001892	-	88	32.492	ENSPSIG00000000226	-	59	32.915	Pelodiscus_sinensis
ENSLACG00000001892	-	92	35.514	ENSPSIG00000001757	-	78	35.514	Pelodiscus_sinensis
ENSLACG00000001892	-	75	34.733	ENSPSIG00000001800	-	59	34.733	Pelodiscus_sinensis
ENSLACG00000001892	-	83	35.172	ENSPSIG00000014032	-	84	35.172	Pelodiscus_sinensis
ENSLACG00000001892	-	84	52.577	ENSPSIG00000002033	-	90	52.577	Pelodiscus_sinensis
ENSLACG00000001892	-	82	56.690	ENSPMEG00000019465	-	64	56.690	Poecilia_mexicana
ENSLACG00000001892	-	87	41.311	ENSPMEG00000018862	-	60	41.311	Poecilia_mexicana
ENSLACG00000001892	-	72	37.349	ENSPREG00000022349	-	53	37.349	Poecilia_reticulata
ENSLACG00000001892	-	87	34.884	ENSPREG00000005117	-	64	34.884	Poecilia_reticulata
ENSLACG00000001892	-	87	34.884	ENSPREG00000006650	-	54	34.884	Poecilia_reticulata
ENSLACG00000001892	-	57	31.683	ENSPNYG00000004598	-	68	31.683	Pundamilia_nyererei
ENSLACG00000001892	-	79	36.232	ENSPNAG00000015949	-	72	36.232	Pygocentrus_nattereri
ENSLACG00000001892	-	93	47.826	ENSPNAG00000010299	-	64	47.826	Pygocentrus_nattereri
ENSLACG00000001892	-	56	44.670	ENSPNAG00000001979	-	77	44.670	Pygocentrus_nattereri
ENSLACG00000001892	-	93	49.533	ENSPNAG00000009058	-	65	49.533	Pygocentrus_nattereri
ENSLACG00000001892	-	99	31.969	ENSSFOG00015024061	-	62	31.969	Scleropages_formosus
ENSLACG00000001892	-	87	32.890	ENSSFOG00015015399	-	85	32.890	Scleropages_formosus
ENSLACG00000001892	-	82	54.930	ENSSFOG00015016168	-	66	54.930	Scleropages_formosus
ENSLACG00000001892	-	76	49.430	ENSTRUG00000024803	-	51	49.430	Takifugu_rubripes
ENSLACG00000001892	-	72	31.746	ENSTRUG00000024970	-	82	31.746	Takifugu_rubripes
ENSLACG00000001892	-	98	34.503	ENSXMAG00000023507	-	66	34.503	Xiphophorus_maculatus
ENSLACG00000001892	-	89	36.452	ENSXMAG00000025957	-	53	36.452	Xiphophorus_maculatus
ENSLACG00000001892	-	75	35.439	ENSXMAG00000027711	-	85	35.439	Xiphophorus_maculatus