EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000002062 (Gene tree)
Gene ID: 102350868
Gene Symbol: RBM46
Alias: CT68|MGC27016
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 31733 bases
Position: chrJH130972.1:39034-70766
Accession: 102350868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002309	DND1_DSRM	PF14709.7	1e-26	1	1
ENSLACP00000002309	RRM_1	PF00076.22	3.3e-36	1	3
ENSLACP00000002309	RRM_1	PF00076.22	3.3e-36	2	3
ENSLACP00000002309	RRM_1	PF00076.22	3.3e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002327	RBM46-201	2498	XM_006013552	ENSLACP00000002309	534 (aa)	XP_006013614	H2ZY38

Gene Model

Click here to download ENSLACG00000002062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002062's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000002062	RBM46	57	72.848	ENSLACG00000007196	RBM47	51	72.848
ENSLACG00000002062	RBM46	75	71.333	ENSLACG00000008061	A1CF	69	71.096
ENSLACG00000002062	RBM46	56	54.967	ENSLACG00000006547	SYNCRIP	54	54.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002062	RBM46	100	86.891	ENSG00000151962	RBM46	100	91.729	Homo_sapiens
ENSLACG00000002062	RBM46	85	65.517	ENSAPOG00000009209	rbm46	90	65.517	Acanthochromis_polyacanthus
ENSLACG00000002062	RBM46	100	87.266	ENSAMEG00000013290	RBM46	100	87.266	Ailuropoda_melanoleuca
ENSLACG00000002062	RBM46	87	61.006	ENSACIG00000014500	rbm46	91	61.006	Amphilophus_citrinellus
ENSLACG00000002062	RBM46	85	65.727	ENSAOCG00000001892	-	99	61.914	Amphiprion_ocellaris
ENSLACG00000002062	RBM46	83	66.964	ENSAPEG00000017762	rbm46	96	66.964	Amphiprion_percula
ENSLACG00000002062	RBM46	96	61.404	ENSATEG00000010775	rbm46	96	61.479	Anabas_testudineus
ENSLACG00000002062	RBM46	87	83.940	ENSAPLG00000005116	RBM46	100	83.940	Anas_platyrhynchos
ENSLACG00000002062	RBM46	100	83.521	ENSACAG00000015599	RBM46	100	83.521	Anolis_carolinensis
ENSLACG00000002062	RBM46	100	86.330	ENSANAG00000029193	RBM46	99	88.223	Aotus_nancymaae
ENSLACG00000002062	RBM46	92	62.722	ENSACLG00000016153	rbm46	95	60.073	Astatotilapia_calliptera
ENSLACG00000002062	RBM46	84	67.550	ENSAMXG00000009397	rbm46	98	67.550	Astyanax_mexicanus
ENSLACG00000002062	RBM46	96	61.582	ENSAMXG00000020892	-	99	61.582	Astyanax_mexicanus
ENSLACG00000002062	RBM46	100	87.079	ENSBTAG00000001696	RBM46	100	87.079	Bos_taurus
ENSLACG00000002062	RBM46	100	85.393	ENSCJAG00000001768	RBM46	99	88.223	Callithrix_jacchus
ENSLACG00000002062	RBM46	100	87.266	ENSCAFG00000008473	RBM46	100	87.266	Canis_familiaris
ENSLACG00000002062	RBM46	100	87.266	ENSCAFG00020002468	RBM46	100	87.266	Canis_lupus_dingo
ENSLACG00000002062	RBM46	100	87.453	ENSCHIG00000000502	RBM46	100	87.453	Capra_hircus
ENSLACG00000002062	RBM46	90	86.902	ENSTSYG00000010435	RBM46	99	88.437	Carlito_syrichta
ENSLACG00000002062	RBM46	88	88.034	ENSCAPG00000011928	-	96	88.034	Cavia_aperea
ENSLACG00000002062	RBM46	69	85.792	ENSCAPG00000011841	-	98	85.792	Cavia_aperea
ENSLACG00000002062	RBM46	100	86.355	ENSCPOG00000010284	-	99	88.009	Cavia_porcellus
ENSLACG00000002062	RBM46	96	81.800	ENSCPOG00000020396	-	99	81.800	Cavia_porcellus
ENSLACG00000002062	RBM46	100	82.931	ENSCPOG00000019272	-	100	82.931	Cavia_porcellus
ENSLACG00000002062	RBM46	100	71.536	ENSCCAG00000001323	-	98	73.504	Cebus_capucinus
ENSLACG00000002062	RBM46	100	87.453	ENSCCAG00000027619	-	99	89.079	Cebus_capucinus
ENSLACG00000002062	RBM46	88	88.462	ENSCATG00000040148	RBM46	99	88.437	Cercocebus_atys
ENSLACG00000002062	RBM46	100	85.206	ENSCLAG00000005846	-	99	87.366	Chinchilla_lanigera
ENSLACG00000002062	RBM46	97	82.205	ENSCLAG00000011886	-	99	82.205	Chinchilla_lanigera
ENSLACG00000002062	RBM46	100	87.079	ENSCSAG00000003263	RBM46	100	87.079	Chlorocebus_sabaeus
ENSLACG00000002062	RBM46	100	85.768	ENSCHOG00000003429	RBM46	100	86.517	Choloepus_hoffmanni
ENSLACG00000002062	RBM46	83	87.416	ENSCPBG00000009314	RBM46	97	87.416	Chrysemys_picta_bellii
ENSLACG00000002062	RBM46	88	88.462	ENSCANG00000039065	RBM46	99	88.437	Colobus_angolensis_palliatus
ENSLACG00000002062	RBM46	100	87.266	ENSCGRG00001016714	Rbm46	99	88.437	Cricetulus_griseus_chok1gshd
ENSLACG00000002062	RBM46	100	87.266	ENSCGRG00000011738	Rbm46	99	88.437	Cricetulus_griseus_crigri
ENSLACG00000002062	RBM46	85	57.792	ENSCSEG00000005530	rbm46	96	57.792	Cynoglossus_semilaevis
ENSLACG00000002062	RBM46	88	62.633	ENSCVAG00000021013	rbm46	96	63.362	Cyprinodon_variegatus
ENSLACG00000002062	RBM46	97	65.152	ENSDARG00000079452	rbm46	99	65.152	Danio_rerio
ENSLACG00000002062	RBM46	100	87.266	ENSDNOG00000016195	RBM46	100	87.266	Dasypus_novemcinctus
ENSLACG00000002062	RBM46	100	87.079	ENSDORG00000006405	Rbm46	99	88.223	Dipodomys_ordii
ENSLACG00000002062	RBM46	100	83.895	ENSETEG00000014902	RBM46	100	83.895	Echinops_telfairi
ENSLACG00000002062	RBM46	100	87.079	ENSEASG00005015821	RBM46	100	87.079	Equus_asinus_asinus
ENSLACG00000002062	RBM46	88	88.675	ENSECAG00000007649	RBM46	96	88.675	Equus_caballus
ENSLACG00000002062	RBM46	100	84.082	ENSEEUG00000011824	RBM46	100	84.082	Erinaceus_europaeus
ENSLACG00000002062	RBM46	69	71.429	ENSELUG00000008166	rbm46	95	71.429	Esox_lucius
ENSLACG00000002062	RBM46	100	87.640	ENSFCAG00000029812	RBM46	99	88.651	Felis_catus
ENSLACG00000002062	RBM46	87	83.298	ENSFALG00000013157	RBM46	92	83.298	Ficedula_albicollis
ENSLACG00000002062	RBM46	100	82.772	ENSFDAG00000019281	-	100	82.772	Fukomys_damarensis
ENSLACG00000002062	RBM46	94	79.802	ENSFDAG00000006445	-	99	79.802	Fukomys_damarensis
ENSLACG00000002062	RBM46	74	63.092	ENSFHEG00000013257	rbm46	87	63.092	Fundulus_heteroclitus
ENSLACG00000002062	RBM46	87	77.088	ENSGALG00000009278	RBM46	99	77.088	Gallus_gallus
ENSLACG00000002062	RBM46	54	80.756	ENSGAFG00000020245	rbm46	99	80.756	Gambusia_affinis
ENSLACG00000002062	RBM46	94	83.600	ENSGAGG00000002019	RBM46	95	83.600	Gopherus_agassizii
ENSLACG00000002062	RBM46	100	87.079	ENSGGOG00000001876	RBM46	99	88.865	Gorilla_gorilla
ENSLACG00000002062	RBM46	85	62.115	ENSHBUG00000009609	rbm46	91	68.660	Haplochromis_burtoni
ENSLACG00000002062	RBM46	97	69.423	ENSHGLG00000010742	-	98	69.038	Heterocephalus_glaber_female
ENSLACG00000002062	RBM46	100	78.464	ENSHGLG00000002463	-	99	86.605	Heterocephalus_glaber_female
ENSLACG00000002062	RBM46	98	70.588	ENSHGLG00000002940	-	100	70.588	Heterocephalus_glaber_female
ENSLACG00000002062	RBM46	97	69.423	ENSHGLG00100004977	-	98	69.038	Heterocephalus_glaber_male
ENSLACG00000002062	RBM46	100	83.895	ENSHGLG00100012752	-	99	86.081	Heterocephalus_glaber_male
ENSLACG00000002062	RBM46	97	67.619	ENSHGLG00100018987	-	99	67.619	Heterocephalus_glaber_male
ENSLACG00000002062	RBM46	84	50.985	ENSHCOG00000012998	rbm46	82	59.105	Hippocampus_comes
ENSLACG00000002062	RBM46	98	65.185	ENSIPUG00000024038	rbm46	99	65.370	Ictalurus_punctatus
ENSLACG00000002062	RBM46	100	87.453	ENSSTOG00000007918	RBM46	99	88.651	Ictidomys_tridecemlineatus
ENSLACG00000002062	RBM46	88	88.889	ENSJJAG00000003902	Rbm46	99	88.865	Jaculus_jaculus
ENSLACG00000002062	RBM46	90	63.900	ENSKMAG00000015127	rbm46	96	61.390	Kryptolebias_marmoratus
ENSLACG00000002062	RBM46	98	71.267	ENSLOCG00000008298	rbm46	99	75.162	Lepisosteus_oculatus
ENSLACG00000002062	RBM46	87	89.079	ENSLAFG00000015448	RBM46	99	89.079	Loxodonta_africana
ENSLACG00000002062	RBM46	88	88.889	ENSMFAG00000043485	RBM46	99	88.865	Macaca_fascicularis
ENSLACG00000002062	RBM46	88	88.889	ENSMMUG00000021147	RBM46	96	88.889	Macaca_mulatta
ENSLACG00000002062	RBM46	88	88.889	ENSMNEG00000002787	RBM46	99	88.865	Macaca_nemestrina
ENSLACG00000002062	RBM46	88	88.248	ENSMLEG00000029756	RBM46	99	88.223	Mandrillus_leucophaeus
ENSLACG00000002062	RBM46	84	66.958	ENSMAMG00000009093	rbm46	99	61.804	Mastacembelus_armatus
ENSLACG00000002062	RBM46	85	65.714	ENSMZEG00005027849	rbm46	92	66.592	Maylandia_zebra
ENSLACG00000002062	RBM46	87	77.088	ENSMGAG00000001457	RBM46	99	77.088	Meleagris_gallopavo
ENSLACG00000002062	RBM46	100	87.266	ENSMAUG00000009911	Rbm46	99	88.437	Mesocricetus_auratus
ENSLACG00000002062	RBM46	100	87.266	ENSMICG00000042747	RBM46	99	88.437	Microcebus_murinus
ENSLACG00000002062	RBM46	100	87.640	ENSMOCG00000001188	Rbm46	99	88.865	Microtus_ochrogaster
ENSLACG00000002062	RBM46	84	64.097	ENSMMOG00000011214	rbm46	96	59.273	Mola_mola
ENSLACG00000002062	RBM46	100	80.651	ENSMODG00000001302	RBM46	100	80.651	Monodelphis_domestica
ENSLACG00000002062	RBM46	79	64.747	ENSMALG00000006185	rbm46	92	65.138	Monopterus_albus
ENSLACG00000002062	RBM46	100	86.704	MGP_CAROLIEiJ_G0025101	Rbm46	99	88.437	Mus_caroli
ENSLACG00000002062	RBM46	100	86.517	ENSMUSG00000033882	Rbm46	99	88.223	Mus_musculus
ENSLACG00000002062	RBM46	100	86.891	MGP_PahariEiJ_G0026544	Rbm46	99	88.437	Mus_pahari
ENSLACG00000002062	RBM46	100	86.330	MGP_SPRETEiJ_G0026043	Rbm46	99	88.009	Mus_spretus
ENSLACG00000002062	RBM46	88	88.889	ENSMPUG00000005670	RBM46	96	88.889	Mustela_putorius_furo
ENSLACG00000002062	RBM46	100	87.103	ENSMLUG00000003221	RBM46	100	87.103	Myotis_lucifugus
ENSLACG00000002062	RBM46	100	86.704	ENSNGAG00000004231	Rbm46	99	88.437	Nannospalax_galili
ENSLACG00000002062	RBM46	85	66.667	ENSNBRG00000000273	rbm46	84	67.338	Neolamprologus_brichardi
ENSLACG00000002062	RBM46	88	88.675	ENSNLEG00000006184	RBM46	99	88.651	Nomascus_leucogenys
ENSLACG00000002062	RBM46	78	89.904	ENSMEUG00000013328	RBM46	99	89.756	Notamacropus_eugenii
ENSLACG00000002062	RBM46	53	91.519	ENSOPRG00000007136	RBM46	100	92.580	Ochotona_princeps
ENSLACG00000002062	RBM46	97	80.077	ENSODEG00000018002	-	96	80.077	Octodon_degus
ENSLACG00000002062	RBM46	100	84.457	ENSODEG00000000735	-	99	87.152	Octodon_degus
ENSLACG00000002062	RBM46	84	66.444	ENSONIG00000014096	rbm46	96	66.444	Oreochromis_niloticus
ENSLACG00000002062	RBM46	93	80.361	ENSOANG00000002141	RBM46	97	83.582	Ornithorhynchus_anatinus
ENSLACG00000002062	RBM46	100	87.453	ENSOCUG00000017859	RBM46	100	87.453	Oryctolagus_cuniculus
ENSLACG00000002062	RBM46	88	62.447	ENSORLG00000002429	rbm46	97	57.982	Oryzias_latipes
ENSLACG00000002062	RBM46	88	62.924	ENSORLG00020022154	rbm46	97	57.778	Oryzias_latipes_hni
ENSLACG00000002062	RBM46	88	62.395	ENSORLG00015020234	rbm46	94	62.658	Oryzias_latipes_hsok
ENSLACG00000002062	RBM46	83	64.080	ENSOMEG00000022580	rbm46	99	58.891	Oryzias_melastigma
ENSLACG00000002062	RBM46	100	87.640	ENSOGAG00000005647	RBM46	100	87.640	Otolemur_garnettii
ENSLACG00000002062	RBM46	100	87.266	ENSOARG00000016406	RBM46	100	87.266	Ovis_aries
ENSLACG00000002062	RBM46	88	88.889	ENSPPAG00000043236	RBM46	99	88.865	Pan_paniscus
ENSLACG00000002062	RBM46	100	87.266	ENSPPRG00000009416	RBM46	99	88.437	Panthera_pardus
ENSLACG00000002062	RBM46	100	87.266	ENSPTIG00000017449	RBM46	99	88.437	Panthera_tigris_altaica
ENSLACG00000002062	RBM46	88	88.889	ENSPTRG00000016538	RBM46	99	88.865	Pan_troglodytes
ENSLACG00000002062	RBM46	100	87.453	ENSPANG00000004186	RBM46	99	88.865	Papio_anubis
ENSLACG00000002062	RBM46	99	68.985	ENSPKIG00000015334	rbm46	92	69.173	Paramormyrops_kingsleyae
ENSLACG00000002062	RBM46	87	87.152	ENSPSIG00000006429	RBM46	95	87.152	Pelodiscus_sinensis
ENSLACG00000002062	RBM46	86	82.397	ENSPMGG00000019872	rbm46	95	81.250	Periophthalmus_magnuspinnatus
ENSLACG00000002062	RBM46	100	87.266	ENSPEMG00000013899	Rbm46	99	88.437	Peromyscus_maniculatus_bairdii
ENSLACG00000002062	RBM46	100	88.015	ENSPCIG00000029626	RBM46	100	88.015	Phascolarctos_cinereus
ENSLACG00000002062	RBM46	76	79.264	ENSPFOG00000001079	rbm46	75	79.264	Poecilia_formosa
ENSLACG00000002062	RBM46	97	60.297	ENSPLAG00000004541	rbm46	96	59.381	Poecilia_latipinna
ENSLACG00000002062	RBM46	87	65.532	ENSPMEG00000015724	rbm46	92	66.225	Poecilia_mexicana
ENSLACG00000002062	RBM46	91	63.821	ENSPREG00000014464	rbm46	95	67.108	Poecilia_reticulata
ENSLACG00000002062	RBM46	100	87.079	ENSPPYG00000015144	RBM46	100	87.079	Pongo_abelii
ENSLACG00000002062	RBM46	99	80.488	ENSPCAG00000003110	RBM46	99	80.300	Procavia_capensis
ENSLACG00000002062	RBM46	100	86.704	ENSPCOG00000024347	RBM46	99	87.794	Propithecus_coquereli
ENSLACG00000002062	RBM46	100	87.266	ENSPVAG00000008376	RBM46	100	87.266	Pteropus_vampyrus
ENSLACG00000002062	RBM46	96	66.855	ENSPNAG00000025312	rbm46	99	66.855	Pygocentrus_nattereri
ENSLACG00000002062	RBM46	100	87.079	ENSRNOG00000025823	Rbm46	100	87.079	Rattus_norvegicus
ENSLACG00000002062	RBM46	88	88.462	ENSRBIG00000032583	RBM46	99	88.437	Rhinopithecus_bieti
ENSLACG00000002062	RBM46	88	88.248	ENSRROG00000044288	RBM46	99	88.223	Rhinopithecus_roxellana
ENSLACG00000002062	RBM46	100	87.079	ENSSBOG00000033028	RBM46	99	88.865	Saimiri_boliviensis_boliviensis
ENSLACG00000002062	RBM46	100	88.202	ENSSHAG00000012596	RBM46	100	88.202	Sarcophilus_harrisii
ENSLACG00000002062	RBM46	100	69.088	ENSSFOG00015000087	rbm46	100	68.529	Scleropages_formosus
ENSLACG00000002062	RBM46	84	62.749	ENSSMAG00000017042	rbm46	94	62.749	Scophthalmus_maximus
ENSLACG00000002062	RBM46	92	61.923	ENSSDUG00000020645	rbm46	87	68.653	Seriola_dumerili
ENSLACG00000002062	RBM46	100	87.640	ENSSARG00000006520	RBM46	100	87.640	Sorex_araneus
ENSLACG00000002062	RBM46	100	85.634	ENSSPUG00000012525	-	100	85.634	Sphenodon_punctatus
ENSLACG00000002062	RBM46	98	80.381	ENSSPUG00000004773	-	97	87.152	Sphenodon_punctatus
ENSLACG00000002062	RBM46	84	63.982	ENSSPAG00000013697	rbm46	93	63.982	Stegastes_partitus
ENSLACG00000002062	RBM46	88	88.889	ENSSSCG00000008994	RBM46	96	88.917	Sus_scrofa
ENSLACG00000002062	RBM46	87	81.156	ENSTGUG00000005307	RBM46	100	81.156	Taeniopygia_guttata
ENSLACG00000002062	RBM46	85	63.457	ENSTRUG00000004237	rbm46	91	63.457	Takifugu_rubripes
ENSLACG00000002062	RBM46	87	61.765	ENSTNIG00000008714	rbm46	86	61.765	Tetraodon_nigroviridis
ENSLACG00000002062	RBM46	100	83.708	ENSTBEG00000013949	RBM46	100	83.708	Tupaia_belangeri
ENSLACG00000002062	RBM46	100	86.142	ENSTTRG00000001239	RBM46	100	86.142	Tursiops_truncatus
ENSLACG00000002062	RBM46	100	87.640	ENSUAMG00000026593	RBM46	100	87.640	Ursus_americanus
ENSLACG00000002062	RBM46	100	87.453	ENSUMAG00000016442	RBM46	100	87.453	Ursus_maritimus
ENSLACG00000002062	RBM46	100	87.453	ENSVVUG00000024957	RBM46	99	88.865	Vulpes_vulpes
ENSLACG00000002062	RBM46	69	72.087	ENSXETG00000032067	-	100	71.274	Xenopus_tropicalis
ENSLACG00000002062	RBM46	100	55.102	ENSXETG00000032344	-	100	54.917	Xenopus_tropicalis
ENSLACG00000002062	RBM46	100	72.846	ENSXETG00000022412	-	99	72.846	Xenopus_tropicalis
ENSLACG00000002062	RBM46	84	65.302	ENSXMAG00000008237	rbm46	90	65.302	Xiphophorus_maculatus