EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000002119 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 861 bases
Position: chrJH127188.1:40468-41328
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002372	RRM_1	PF00076.22	5.7e-08	1	1
ENSLACP00000002371	RRM_1	PF00076.22	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002391	-	273	-	ENSLACP00000002371	91 (aa)	-	H2ZYA0
ENSLACT00000002392	-	345	-	ENSLACP00000002372	115 (aa)	-	H2ZYA1

Gene Model

Click here to download ENSLACG00000002119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000002119	-	93	73.913	ENSLACG00000016312	-	73	73.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002119	-	93	75.000	ENSAPLG00000001120	-	96	75.000	Anas_platyrhynchos
ENSLACG00000002119	-	93	72.043	ENSACAG00000010826	-	97	72.340	Anolis_carolinensis
ENSLACG00000002119	-	92	60.227	ENSCAFG00020006479	-	55	60.674	Canis_lupus_dingo
ENSLACG00000002119	-	93	74.468	ENSCSAG00000017935	-	65	74.737	Chlorocebus_sabaeus
ENSLACG00000002119	-	54	95.918	ENSCPBG00000005209	-	54	95.918	Chrysemys_picta_bellii
ENSLACG00000002119	-	100	71.000	ENSDNOG00000043454	-	66	71.000	Dasypus_novemcinctus
ENSLACG00000002119	-	92	73.810	ENSEBUG00000013374	-	67	74.118	Eptatretus_burgeri
ENSLACG00000002119	-	92	60.227	ENSECAG00000035617	-	55	60.674	Equus_caballus
ENSLACG00000002119	-	93	76.087	ENSFALG00000009186	-	72	76.087	Ficedula_albicollis
ENSLACG00000002119	-	62	88.136	ENSGAGG00000002125	-	64	88.136	Gopherus_agassizii
ENSLACG00000002119	-	93	68.478	ENSLOCG00000017522	-	99	68.817	Lepisosteus_oculatus
ENSLACG00000002119	-	92	61.364	MGP_CAROLIEiJ_G0032305	Celf6	54	61.798	Mus_caroli
ENSLACG00000002119	-	92	61.364	ENSMUSG00000032297	Celf6	54	61.798	Mus_musculus
ENSLACG00000002119	-	92	61.364	MGP_PahariEiJ_G0015171	Celf6	54	61.798	Mus_pahari
ENSLACG00000002119	-	92	61.364	MGP_SPRETEiJ_G0033445	Celf6	54	61.798	Mus_spretus
ENSLACG00000002119	-	82	65.385	ENSONIG00000004856	celf5a	59	67.500	Oreochromis_niloticus
ENSLACG00000002119	-	93	63.043	ENSPSIG00000015573	-	72	63.441	Pelodiscus_sinensis
ENSLACG00000002119	-	93	69.231	ENSPFOG00000024694	-	96	69.565	Poecilia_formosa
ENSLACG00000002119	-	93	74.468	ENSRNOG00000049802	AABR07031533.1	57	74.737	Rattus_norvegicus
ENSLACG00000002119	-	93	73.118	ENSSHAG00000001767	-	68	73.118	Sarcophilus_harrisii
ENSLACG00000002119	-	80	71.053	ENSSHAG00000008992	-	83	71.053	Sarcophilus_harrisii
ENSLACG00000002119	-	93	77.647	ENSSPAG00000007933	-	66	78.161	Stegastes_partitus
ENSLACG00000002119	-	93	76.087	ENSTGUG00000001647	-	73	76.087	Taeniopygia_guttata
ENSLACG00000002119	-	92	60.227	ENSUAMG00000025727	-	55	60.674	Ursus_americanus
ENSLACG00000002119	-	80	80.263	ENSUAMG00000025536	-	59	80.263	Ursus_americanus
ENSLACG00000002119	-	80	80.263	ENSUMAG00000002210	-	59	80.263	Ursus_maritimus
ENSLACG00000002119	-	92	60.227	ENSVVUG00000018268	-	63	60.674	Vulpes_vulpes