EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000002169 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1898 bases
Position: chrJH131123.1:42092-43989
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002429	RVT_1	PF00078.27	6.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002449	-	1857	-	ENSLACP00000002429	619 (aa)	-	H2ZYF8

Gene Model

Click here to download ENSLACG00000002169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000002169	-	88	41.606	ENSLACG00000009168	-	87	35.846
ENSLACG00000002169	-	85	39.400	ENSLACG00000010862	-	55	39.400
ENSLACG00000002169	-	81	36.364	ENSLACG00000016284	-	96	45.283
ENSLACG00000002169	-	77	41.322	ENSLACG00000001186	-	65	41.322
ENSLACG00000002169	-	95	65.385	ENSLACG00000014947	-	50	65.397
ENSLACG00000002169	-	99	39.200	ENSLACG00000003314	-	55	39.200
ENSLACG00000002169	-	68	38.407	ENSLACG00000008355	-	61	38.407
ENSLACG00000002169	-	81	37.736	ENSLACG00000017143	-	82	37.736
ENSLACG00000002169	-	83	35.441	ENSLACG00000010776	-	75	35.441
ENSLACG00000002169	-	67	41.190	ENSLACG00000007131	-	53	41.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002169	-	54	34.911	ENSAPOG00000008925	-	93	34.911	Acanthochromis_polyacanthus
ENSLACG00000002169	-	60	34.565	ENSAOCG00000003030	-	51	34.565	Amphiprion_ocellaris
ENSLACG00000002169	-	90	30.634	ENSAPEG00000014949	-	81	30.810	Amphiprion_percula
ENSLACG00000002169	-	63	32.536	ENSAPEG00000006765	-	64	32.536	Amphiprion_percula
ENSLACG00000002169	-	95	31.475	ENSATEG00000019692	-	54	31.475	Anabas_testudineus
ENSLACG00000002169	-	51	32.609	ENSACLG00000013289	-	95	32.609	Astatotilapia_calliptera
ENSLACG00000002169	-	79	32.475	ENSACLG00000001380	-	84	32.475	Astatotilapia_calliptera
ENSLACG00000002169	-	62	34.961	ENSACLG00000020385	-	69	34.988	Astatotilapia_calliptera
ENSLACG00000002169	-	63	32.464	ENSACLG00000005847	-	57	32.464	Astatotilapia_calliptera
ENSLACG00000002169	-	66	31.655	ENSACLG00000013847	-	95	31.655	Astatotilapia_calliptera
ENSLACG00000002169	-	99	31.931	ENSACLG00000004561	-	60	31.931	Astatotilapia_calliptera
ENSLACG00000002169	-	57	36.313	ENSAMXG00000031032	-	95	36.313	Astyanax_mexicanus
ENSLACG00000002169	-	55	34.493	ENSAMXG00000039106	-	68	34.493	Astyanax_mexicanus
ENSLACG00000002169	-	66	30.455	ENSAMXG00000030761	-	58	30.455	Astyanax_mexicanus
ENSLACG00000002169	-	66	30.455	ENSAMXG00000043631	-	53	30.455	Astyanax_mexicanus
ENSLACG00000002169	-	64	31.841	ENSAMXG00000040471	-	61	31.841	Astyanax_mexicanus
ENSLACG00000002169	-	58	31.061	ENSAMXG00000042777	-	51	31.061	Astyanax_mexicanus
ENSLACG00000002169	-	61	37.565	ENSAMXG00000038502	-	78	37.565	Astyanax_mexicanus
ENSLACG00000002169	-	54	31.421	ENSAMXG00000038480	-	52	31.421	Astyanax_mexicanus
ENSLACG00000002169	-	64	32.921	ENSCPBG00000001369	-	71	32.921	Chrysemys_picta_bellii
ENSLACG00000002169	-	56	33.239	ENSCPBG00000001119	-	77	33.239	Chrysemys_picta_bellii
ENSLACG00000002169	-	98	43.038	ENSCSEG00000010442	-	62	42.880	Cynoglossus_semilaevis
ENSLACG00000002169	-	87	48.991	ENSCVAG00000019870	-	73	48.991	Cyprinodon_variegatus
ENSLACG00000002169	-	57	32.133	ENSGAGG00000007552	-	56	32.133	Gopherus_agassizii
ENSLACG00000002169	-	64	32.178	ENSGAGG00000013650	-	71	32.178	Gopherus_agassizii
ENSLACG00000002169	-	65	33.252	ENSGAGG00000002613	-	55	33.252	Gopherus_agassizii
ENSLACG00000002169	-	78	48.367	ENSGAGG00000007173	-	77	48.367	Gopherus_agassizii
ENSLACG00000002169	-	78	46.721	ENSGAGG00000011063	-	100	46.721	Gopherus_agassizii
ENSLACG00000002169	-	99	44.359	ENSGAGG00000022002	-	77	44.359	Gopherus_agassizii
ENSLACG00000002169	-	57	36.592	ENSHBUG00000009088	-	98	36.592	Haplochromis_burtoni
ENSLACG00000002169	-	86	45.911	ENSHCOG00000019997	-	97	45.911	Hippocampus_comes
ENSLACG00000002169	-	65	47.087	ENSIPUG00000003645	-	84	47.087	Ictalurus_punctatus
ENSLACG00000002169	-	53	36.012	ENSKMAG00000007574	-	66	36.012	Kryptolebias_marmoratus
ENSLACG00000002169	-	87	31.429	ENSKMAG00000003188	-	77	31.429	Kryptolebias_marmoratus
ENSLACG00000002169	-	96	31.935	ENSKMAG00000013568	-	76	31.935	Kryptolebias_marmoratus
ENSLACG00000002169	-	54	35.503	ENSLBEG00000003912	-	87	35.503	Labrus_bergylta
ENSLACG00000002169	-	52	31.902	ENSLOCG00000017292	-	99	31.902	Lepisosteus_oculatus
ENSLACG00000002169	-	76	44.397	ENSMAMG00000019918	-	77	44.397	Mastacembelus_armatus
ENSLACG00000002169	-	63	33.649	ENSMAMG00000016004	-	63	33.649	Mastacembelus_armatus
ENSLACG00000002169	-	52	30.183	ENSMZEG00005023829	-	66	30.183	Maylandia_zebra
ENSLACG00000002169	-	66	31.674	ENSMZEG00005017878	-	68	31.674	Maylandia_zebra
ENSLACG00000002169	-	60	34.474	ENSMZEG00005008378	-	52	34.474	Maylandia_zebra
ENSLACG00000002169	-	73	30.719	ENSMZEG00005024252	-	53	30.719	Maylandia_zebra
ENSLACG00000002169	-	50	34.921	ENSNBRG00000002477	-	93	34.921	Neolamprologus_brichardi
ENSLACG00000002169	-	98	32.334	ENSORLG00000026235	-	67	32.334	Oryzias_latipes
ENSLACG00000002169	-	68	32.558	ENSORLG00000027869	-	94	32.558	Oryzias_latipes
ENSLACG00000002169	-	65	32.678	ENSORLG00000027231	-	77	32.678	Oryzias_latipes
ENSLACG00000002169	-	84	30.460	ENSORLG00000027443	-	89	30.460	Oryzias_latipes
ENSLACG00000002169	-	58	36.538	ENSORLG00020012706	-	91	36.538	Oryzias_latipes_hni
ENSLACG00000002169	-	68	35.431	ENSORLG00020002002	-	67	35.431	Oryzias_latipes_hni
ENSLACG00000002169	-	94	31.491	ENSORLG00020019030	-	70	31.491	Oryzias_latipes_hni
ENSLACG00000002169	-	56	35.227	ENSORLG00020016252	-	93	35.227	Oryzias_latipes_hni
ENSLACG00000002169	-	62	35.550	ENSORLG00020000154	-	96	35.550	Oryzias_latipes_hni
ENSLACG00000002169	-	61	34.465	ENSORLG00020001433	-	51	34.465	Oryzias_latipes_hni
ENSLACG00000002169	-	53	35.417	ENSORLG00020016924	-	80	35.417	Oryzias_latipes_hni
ENSLACG00000002169	-	68	34.266	ENSORLG00020009127	-	84	34.266	Oryzias_latipes_hni
ENSLACG00000002169	-	98	31.487	ENSORLG00020012971	-	51	31.487	Oryzias_latipes_hni
ENSLACG00000002169	-	98	32.334	ENSORLG00020021465	-	50	32.334	Oryzias_latipes_hni
ENSLACG00000002169	-	52	31.595	ENSORLG00020021288	-	99	31.595	Oryzias_latipes_hni
ENSLACG00000002169	-	68	34.660	ENSORLG00015008138	-	81	34.660	Oryzias_latipes_hsok
ENSLACG00000002169	-	97	31.392	ENSORLG00015013369	-	78	31.392	Oryzias_latipes_hsok
ENSLACG00000002169	-	75	31.250	ENSORLG00015009803	-	96	31.250	Oryzias_latipes_hsok
ENSLACG00000002169	-	57	35.933	ENSORLG00015021822	-	96	36.264	Oryzias_latipes_hsok
ENSLACG00000002169	-	56	30.966	ENSORLG00015013109	-	56	30.966	Oryzias_latipes_hsok
ENSLACG00000002169	-	98	31.918	ENSORLG00015022314	-	72	31.918	Oryzias_latipes_hsok
ENSLACG00000002169	-	98	31.320	ENSORLG00015017997	-	62	31.320	Oryzias_latipes_hsok
ENSLACG00000002169	-	96	31.935	ENSOMEG00000017295	-	61	32.253	Oryzias_melastigma
ENSLACG00000002169	-	90	31.065	ENSOMEG00000013437	-	95	31.065	Oryzias_melastigma
ENSLACG00000002169	-	85	46.429	ENSOMEG00000005634	-	72	46.429	Oryzias_melastigma
ENSLACG00000002169	-	55	33.143	ENSOMEG00000013479	-	57	33.143	Oryzias_melastigma
ENSLACG00000002169	-	87	44.928	ENSPKIG00000013778	-	80	43.216	Paramormyrops_kingsleyae
ENSLACG00000002169	-	55	33.067	ENSPKIG00000012990	-	55	32.000	Paramormyrops_kingsleyae
ENSLACG00000002169	-	85	38.920	ENSPKIG00000005406	-	88	38.920	Paramormyrops_kingsleyae
ENSLACG00000002169	-	72	47.120	ENSPKIG00000015048	-	65	47.120	Paramormyrops_kingsleyae
ENSLACG00000002169	-	56	37.465	ENSPKIG00000007140	-	81	37.465	Paramormyrops_kingsleyae
ENSLACG00000002169	-	82	31.845	ENSPKIG00000006845	-	51	31.845	Paramormyrops_kingsleyae
ENSLACG00000002169	-	61	35.309	ENSPSIG00000001757	-	94	35.309	Pelodiscus_sinensis
ENSLACG00000002169	-	57	33.799	ENSPSIG00000000367	-	81	33.799	Pelodiscus_sinensis
ENSLACG00000002169	-	61	33.679	ENSPSIG00000001205	-	82	33.679	Pelodiscus_sinensis
ENSLACG00000002169	-	62	34.615	ENSPSIG00000001197	-	94	34.615	Pelodiscus_sinensis
ENSLACG00000002169	-	60	45.119	ENSPSIG00000000007	-	95	45.119	Pelodiscus_sinensis
ENSLACG00000002169	-	57	34.454	ENSPSIG00000001800	-	80	34.454	Pelodiscus_sinensis
ENSLACG00000002169	-	64	30.622	ENSPSIG00000000226	-	79	30.622	Pelodiscus_sinensis
ENSLACG00000002169	-	58	34.783	ENSPSIG00000000193	-	72	34.783	Pelodiscus_sinensis
ENSLACG00000002169	-	52	34.242	ENSPSIG00000001249	-	94	34.242	Pelodiscus_sinensis
ENSLACG00000002169	-	70	32.574	ENSPSIG00000001614	-	62	32.574	Pelodiscus_sinensis
ENSLACG00000002169	-	58	33.333	ENSPSIG00000001150	-	50	33.333	Pelodiscus_sinensis
ENSLACG00000002169	-	65	37.226	ENSPMEG00000018862	-	83	37.226	Poecilia_mexicana
ENSLACG00000002169	-	89	40.940	ENSPMEG00000017235	-	97	40.940	Poecilia_mexicana
ENSLACG00000002169	-	98	31.738	ENSPMEG00000005690	-	61	31.776	Poecilia_mexicana
ENSLACG00000002169	-	60	34.726	ENSPREG00000022349	-	82	34.726	Poecilia_reticulata
ENSLACG00000002169	-	56	47.592	ENSPNAG00000009058	-	71	47.592	Pygocentrus_nattereri
ENSLACG00000002169	-	62	46.632	ENSPNAG00000010299	-	77	46.632	Pygocentrus_nattereri
ENSLACG00000002169	-	60	34.748	ENSPNAG00000015949	-	98	34.748	Pygocentrus_nattereri
ENSLACG00000002169	-	60	32.374	ENSSFOG00015024061	-	68	32.374	Scleropages_formosus
ENSLACG00000002169	-	91	31.239	ENSSDUG00000011043	-	71	31.239	Seriola_dumerili
ENSLACG00000002169	-	90	30.420	ENSSPAG00000008169	-	90	31.088	Stegastes_partitus
ENSLACG00000002169	-	79	42.718	ENSTRUG00000024803	-	100	42.718	Takifugu_rubripes
ENSLACG00000002169	-	51	34.985	ENSXMAG00000023507	-	63	34.985	Xiphophorus_maculatus