EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000002197 (Gene tree)
Gene ID: 102360971
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 19150 bases
Position: chrJH129111.1:42907-62056
Accession: 102360971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002461	AARP2CN	PF08142.12	1.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002481	TSR1-201	3229	XM_006010986	ENSLACP00000002461	820 (aa)	XP_006011048	H2ZYJ0

Gene Model

Click here to download ENSLACG00000002197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002197	TSR1	98	64.384	ENSG00000167721	TSR1	98	64.259	Homo_sapiens
ENSLACG00000002197	TSR1	100	56.923	ENSAPOG00000020891	tsr1	100	57.938	Acanthochromis_polyacanthus
ENSLACG00000002197	TSR1	99	62.791	ENSAMEG00000007599	TSR1	99	61.968	Ailuropoda_melanoleuca
ENSLACG00000002197	TSR1	100	56.423	ENSACIG00000007090	tsr1	100	57.143	Amphilophus_citrinellus
ENSLACG00000002197	TSR1	100	57.126	ENSAOCG00000023284	tsr1	100	58.076	Amphiprion_ocellaris
ENSLACG00000002197	TSR1	93	57.452	ENSAPEG00000008452	tsr1	100	58.217	Amphiprion_percula
ENSLACG00000002197	TSR1	100	57.379	ENSATEG00000021961	tsr1	100	57.261	Anabas_testudineus
ENSLACG00000002197	TSR1	91	66.711	ENSAPLG00000013422	TSR1	100	67.065	Anas_platyrhynchos
ENSLACG00000002197	TSR1	70	54.467	ENSACAG00000000859	TSR1	92	54.855	Anolis_carolinensis
ENSLACG00000002197	TSR1	98	64.134	ENSANAG00000031071	TSR1	98	64.134	Aotus_nancymaae
ENSLACG00000002197	TSR1	100	57.348	ENSACLG00000007595	tsr1	99	57.346	Astatotilapia_calliptera
ENSLACG00000002197	TSR1	50	53.917	ENSAMXG00000008470	tsr1	90	54.756	Astyanax_mexicanus
ENSLACG00000002197	TSR1	99	64.496	ENSBTAG00000004225	TSR1	99	64.137	Bos_taurus
ENSLACG00000002197	TSR1	96	39.726	WBGene00006497	tag-151	95	39.875	Caenorhabditis_elegans
ENSLACG00000002197	TSR1	98	62.968	ENSCJAG00000012456	TSR1	98	62.968	Callithrix_jacchus
ENSLACG00000002197	TSR1	90	61.465	ENSCAFG00000019273	-	100	65.672	Canis_familiaris
ENSLACG00000002197	TSR1	99	63.190	ENSCAFG00000002106	-	99	62.945	Canis_familiaris
ENSLACG00000002197	TSR1	99	63.113	ENSCAFG00020009728	TSR1	99	62.868	Canis_lupus_dingo
ENSLACG00000002197	TSR1	99	64.496	ENSCHIG00000023935	TSR1	99	64.619	Capra_hircus
ENSLACG00000002197	TSR1	99	63.022	ENSTSYG00000005468	TSR1	99	62.913	Carlito_syrichta
ENSLACG00000002197	TSR1	92	63.241	ENSCPOG00000014833	TSR1	99	63.624	Cavia_porcellus
ENSLACG00000002197	TSR1	92	62.434	ENSCCAG00000028962	TSR1	97	62.434	Cebus_capucinus
ENSLACG00000002197	TSR1	98	63.930	ENSCATG00000044262	TSR1	98	63.806	Cercocebus_atys
ENSLACG00000002197	TSR1	99	62.546	ENSCLAG00000005567	TSR1	99	62.592	Chinchilla_lanigera
ENSLACG00000002197	TSR1	98	64.179	ENSCSAG00000013788	TSR1	98	64.055	Chlorocebus_sabaeus
ENSLACG00000002197	TSR1	99	67.078	ENSCPBG00000020363	TSR1	98	67.112	Chrysemys_picta_bellii
ENSLACG00000002197	TSR1	97	47.643	ENSCING00000020658	-	99	47.329	Ciona_intestinalis
ENSLACG00000002197	TSR1	96	45.590	ENSCSAVG00000001875	-	100	45.353	Ciona_savignyi
ENSLACG00000002197	TSR1	99	58.773	ENSCANG00000033056	TSR1	99	70.154	Colobus_angolensis_palliatus
ENSLACG00000002197	TSR1	99	63.636	ENSCGRG00001023942	Tsr1	99	63.882	Cricetulus_griseus_chok1gshd
ENSLACG00000002197	TSR1	99	58.354	ENSCGRG00000013015	Tsr1	99	59.091	Cricetulus_griseus_crigri
ENSLACG00000002197	TSR1	100	55.675	ENSCSEG00000013009	tsr1	99	56.340	Cynoglossus_semilaevis
ENSLACG00000002197	TSR1	100	57.177	ENSCVAG00000000506	tsr1	100	57.314	Cyprinodon_variegatus
ENSLACG00000002197	TSR1	100	58.193	ENSDARG00000007744	tsr1	100	58.293	Danio_rerio
ENSLACG00000002197	TSR1	99	63.391	ENSDNOG00000004715	TSR1	99	66.379	Dasypus_novemcinctus
ENSLACG00000002197	TSR1	99	64.128	ENSDORG00000016371	-	99	62.776	Dipodomys_ordii
ENSLACG00000002197	TSR1	96	56.036	ENSDORG00000023234	-	99	54.130	Dipodomys_ordii
ENSLACG00000002197	TSR1	96	43.457	FBgn0037073	Tsr1	96	43.602	Drosophila_melanogaster
ENSLACG00000002197	TSR1	90	71.895	ENSETEG00000017534	TSR1	89	71.895	Echinops_telfairi
ENSLACG00000002197	TSR1	95	52.679	ENSEBUG00000013731	TSR1	98	52.551	Eptatretus_burgeri
ENSLACG00000002197	TSR1	99	63.614	ENSEASG00005009302	TSR1	98	63.858	Equus_asinus_asinus
ENSLACG00000002197	TSR1	99	63.759	ENSECAG00000009114	TSR1	99	63.882	Equus_caballus
ENSLACG00000002197	TSR1	99	57.212	ENSELUG00000020984	tsr1	95	57.314	Esox_lucius
ENSLACG00000002197	TSR1	99	64.251	ENSFCAG00000006313	TSR1	99	64.251	Felis_catus
ENSLACG00000002197	TSR1	100	65.937	ENSFALG00000006532	TSR1	99	65.854	Ficedula_albicollis
ENSLACG00000002197	TSR1	99	63.022	ENSFDAG00000006038	TSR1	99	62.899	Fukomys_damarensis
ENSLACG00000002197	TSR1	100	56.126	ENSFHEG00000003626	tsr1	99	56.856	Fundulus_heteroclitus
ENSLACG00000002197	TSR1	100	54.773	ENSGMOG00000010336	tsr1	100	54.900	Gadus_morhua
ENSLACG00000002197	TSR1	100	56.853	ENSGAFG00000012993	tsr1	99	57.311	Gambusia_affinis
ENSLACG00000002197	TSR1	100	56.989	ENSGACG00000010843	tsr1	100	56.870	Gasterosteus_aculeatus
ENSLACG00000002197	TSR1	99	66.131	ENSGAGG00000025619	-	100	66.261	Gopherus_agassizii
ENSLACG00000002197	TSR1	98	64.384	ENSGGOG00000001704	TSR1	98	64.259	Gorilla_gorilla
ENSLACG00000002197	TSR1	100	56.671	ENSHBUG00000017904	tsr1	100	57.468	Haplochromis_burtoni
ENSLACG00000002197	TSR1	97	55.125	ENSHGLG00000015688	-	99	54.875	Heterocephalus_glaber_female
ENSLACG00000002197	TSR1	99	63.892	ENSHGLG00000012806	-	99	64.015	Heterocephalus_glaber_female
ENSLACG00000002197	TSR1	99	63.892	ENSHGLG00100015392	TSR1	99	64.015	Heterocephalus_glaber_male
ENSLACG00000002197	TSR1	99	57.959	ENSHCOG00000001432	tsr1	99	58.080	Hippocampus_comes
ENSLACG00000002197	TSR1	100	57.362	ENSIPUG00000004618	tsr1	100	58.432	Ictalurus_punctatus
ENSLACG00000002197	TSR1	99	62.899	ENSSTOG00000011819	TSR1	99	62.958	Ictidomys_tridecemlineatus
ENSLACG00000002197	TSR1	91	60.800	ENSJJAG00000019505	Tsr1	95	60.667	Jaculus_jaculus
ENSLACG00000002197	TSR1	100	56.734	ENSKMAG00000005763	tsr1	99	57.770	Kryptolebias_marmoratus
ENSLACG00000002197	TSR1	100	55.920	ENSLBEG00000021823	tsr1	99	57.651	Labrus_bergylta
ENSLACG00000002197	TSR1	99	54.136	ENSLOCG00000006491	TSR1	99	53.502	Lepisosteus_oculatus
ENSLACG00000002197	TSR1	98	64.179	ENSMFAG00000021330	TSR1	98	64.055	Macaca_fascicularis
ENSLACG00000002197	TSR1	98	63.930	ENSMMUG00000017519	TSR1	98	63.806	Macaca_mulatta
ENSLACG00000002197	TSR1	98	64.303	ENSMNEG00000031382	TSR1	98	64.179	Macaca_nemestrina
ENSLACG00000002197	TSR1	98	63.806	ENSMLEG00000036733	TSR1	98	63.682	Mandrillus_leucophaeus
ENSLACG00000002197	TSR1	100	56.706	ENSMAMG00000017918	tsr1	99	57.176	Mastacembelus_armatus
ENSLACG00000002197	TSR1	100	56.557	ENSMZEG00005007477	tsr1	100	58.076	Maylandia_zebra
ENSLACG00000002197	TSR1	99	64.338	ENSMGAG00000005576	TSR1	99	64.583	Meleagris_gallopavo
ENSLACG00000002197	TSR1	99	64.251	ENSMICG00000012943	TSR1	99	64.865	Microcebus_murinus
ENSLACG00000002197	TSR1	99	63.926	ENSMOCG00000022764	Tsr1	99	63.067	Microtus_ochrogaster
ENSLACG00000002197	TSR1	99	56.595	ENSMMOG00000014280	tsr1	99	58.384	Mola_mola
ENSLACG00000002197	TSR1	98	64.801	ENSMODG00000010658	TSR1	99	64.428	Monodelphis_domestica
ENSLACG00000002197	TSR1	100	57.346	ENSMALG00000011681	tsr1	100	58.175	Monopterus_albus
ENSLACG00000002197	TSR1	99	63.882	MGP_CAROLIEiJ_G0016727	Tsr1	99	63.882	Mus_caroli
ENSLACG00000002197	TSR1	99	64.251	ENSMUSG00000038335	Tsr1	99	64.251	Mus_musculus
ENSLACG00000002197	TSR1	99	64.373	MGP_PahariEiJ_G0017864	Tsr1	99	64.128	Mus_pahari
ENSLACG00000002197	TSR1	99	64.251	MGP_SPRETEiJ_G0017570	Tsr1	99	64.251	Mus_spretus
ENSLACG00000002197	TSR1	82	66.218	ENSMPUG00000013000	TSR1	100	65.919	Mustela_putorius_furo
ENSLACG00000002197	TSR1	98	64.633	ENSMLUG00000003505	TSR1	98	64.392	Myotis_lucifugus
ENSLACG00000002197	TSR1	100	58.145	ENSNBRG00000020728	tsr1	99	58.038	Neolamprologus_brichardi
ENSLACG00000002197	TSR1	88	74.713	ENSNLEG00000017184	TSR1	98	59.278	Nomascus_leucogenys
ENSLACG00000002197	TSR1	99	60.247	ENSMEUG00000015828	TSR1	99	60.123	Notamacropus_eugenii
ENSLACG00000002197	TSR1	100	58.014	ENSONIG00000013131	tsr1	100	57.536	Oreochromis_niloticus
ENSLACG00000002197	TSR1	96	62.532	ENSOANG00000008637	TSR1	100	62.025	Ornithorhynchus_anatinus
ENSLACG00000002197	TSR1	99	63.882	ENSOCUG00000014256	TSR1	99	64.005	Oryctolagus_cuniculus
ENSLACG00000002197	TSR1	100	57.801	ENSORLG00000004926	tsr1	99	58.629	Oryzias_latipes
ENSLACG00000002197	TSR1	100	58.244	ENSORLG00020008792	tsr1	99	58.817	Oryzias_latipes_hni
ENSLACG00000002197	TSR1	100	57.801	ENSORLG00015013838	tsr1	99	58.629	Oryzias_latipes_hsok
ENSLACG00000002197	TSR1	100	57.651	ENSOMEG00000004830	tsr1	99	58.126	Oryzias_melastigma
ENSLACG00000002197	TSR1	99	62.607	ENSOGAG00000004492	TSR1	99	62.607	Otolemur_garnettii
ENSLACG00000002197	TSR1	99	64.988	ENSOARG00000015437	TSR1	97	64.627	Ovis_aries
ENSLACG00000002197	TSR1	98	64.384	ENSPPAG00000036355	TSR1	98	64.259	Pan_paniscus
ENSLACG00000002197	TSR1	99	64.005	ENSPPRG00000015519	-	99	64.005	Panthera_pardus
ENSLACG00000002197	TSR1	99	64.005	ENSPTIG00000010608	TSR1	99	64.005	Panthera_tigris_altaica
ENSLACG00000002197	TSR1	98	64.384	ENSPTRG00000008547	TSR1	98	64.259	Pan_troglodytes
ENSLACG00000002197	TSR1	98	62.438	ENSPANG00000024463	TSR1	98	62.313	Papio_anubis
ENSLACG00000002197	TSR1	99	58.323	ENSPKIG00000013972	tsr1	99	58.343	Paramormyrops_kingsleyae
ENSLACG00000002197	TSR1	87	67.038	ENSPSIG00000018258	TSR1	100	67.083	Pelodiscus_sinensis
ENSLACG00000002197	TSR1	99	57.869	ENSPMGG00000011577	tsr1	99	57.660	Periophthalmus_magnuspinnatus
ENSLACG00000002197	TSR1	99	63.636	ENSPEMG00000018033	Tsr1	99	63.514	Peromyscus_maniculatus_bairdii
ENSLACG00000002197	TSR1	99	64.294	ENSPCIG00000009357	TSR1	97	64.785	Phascolarctos_cinereus
ENSLACG00000002197	TSR1	100	56.699	ENSPFOG00000004483	TSR1	100	57.399	Poecilia_formosa
ENSLACG00000002197	TSR1	100	56.023	ENSPLAG00000022320	tsr1	99	57.160	Poecilia_latipinna
ENSLACG00000002197	TSR1	100	56.140	ENSPMEG00000004577	tsr1	99	57.227	Poecilia_mexicana
ENSLACG00000002197	TSR1	97	56.438	ENSPREG00000010354	tsr1	96	57.959	Poecilia_reticulata
ENSLACG00000002197	TSR1	98	60.000	ENSPPYG00000007792	TSR1	98	59.876	Pongo_abelii
ENSLACG00000002197	TSR1	51	59.091	ENSPCAG00000012973	-	71	59.091	Procavia_capensis
ENSLACG00000002197	TSR1	99	63.882	ENSPCOG00000017928	TSR1	99	63.882	Propithecus_coquereli
ENSLACG00000002197	TSR1	99	63.145	ENSPVAG00000002162	TSR1	98	63.727	Pteropus_vampyrus
ENSLACG00000002197	TSR1	100	57.467	ENSPNYG00000016163	tsr1	99	57.583	Pundamilia_nyererei
ENSLACG00000002197	TSR1	100	58.323	ENSPNAG00000008659	tsr1	100	58.796	Pygocentrus_nattereri
ENSLACG00000002197	TSR1	99	64.128	ENSRNOG00000002980	Tsr1	99	64.496	Rattus_norvegicus
ENSLACG00000002197	TSR1	98	63.930	ENSRBIG00000040016	TSR1	98	64.055	Rhinopithecus_bieti
ENSLACG00000002197	TSR1	98	64.055	ENSRROG00000030361	TSR1	98	64.179	Rhinopithecus_roxellana
ENSLACG00000002197	TSR1	96	31.912	YDL060W	-	98	31.098	Saccharomyces_cerevisiae
ENSLACG00000002197	TSR1	98	64.010	ENSSBOG00000020785	TSR1	98	63.602	Saimiri_boliviensis_boliviensis
ENSLACG00000002197	TSR1	99	64.068	ENSSHAG00000011394	TSR1	99	64.670	Sarcophilus_harrisii
ENSLACG00000002197	TSR1	100	58.463	ENSSFOG00015005455	tsr1	100	58.675	Scleropages_formosus
ENSLACG00000002197	TSR1	100	55.962	ENSSMAG00000009504	tsr1	100	56.635	Scophthalmus_maximus
ENSLACG00000002197	TSR1	99	57.074	ENSSDUG00000012074	tsr1	98	58.273	Seriola_dumerili
ENSLACG00000002197	TSR1	99	57.143	ENSSLDG00000002031	tsr1	98	58.223	Seriola_lalandi_dorsalis
ENSLACG00000002197	TSR1	92	58.167	ENSSARG00000000759	TSR1	93	58.167	Sorex_araneus
ENSLACG00000002197	TSR1	100	66.383	ENSSPUG00000007042	TSR1	100	66.262	Sphenodon_punctatus
ENSLACG00000002197	TSR1	100	56.958	ENSSPAG00000021951	tsr1	100	57.851	Stegastes_partitus
ENSLACG00000002197	TSR1	99	64.251	ENSSSCG00000038534	TSR1	99	63.736	Sus_scrofa
ENSLACG00000002197	TSR1	90	68.022	ENSTGUG00000005883	TSR1	100	68.293	Taeniopygia_guttata
ENSLACG00000002197	TSR1	100	58.423	ENSTRUG00000004665	tsr1	100	58.999	Takifugu_rubripes
ENSLACG00000002197	TSR1	99	57.022	ENSTNIG00000016196	tsr1	99	57.920	Tetraodon_nigroviridis
ENSLACG00000002197	TSR1	67	76.154	ENSTBEG00000015275	-	66	76.154	Tupaia_belangeri
ENSLACG00000002197	TSR1	99	63.759	ENSTTRG00000001177	TSR1	99	63.403	Tursiops_truncatus
ENSLACG00000002197	TSR1	99	62.776	ENSUAMG00000025160	TSR1	99	62.393	Ursus_americanus
ENSLACG00000002197	TSR1	96	63.439	ENSUMAG00000009294	TSR1	98	63.312	Ursus_maritimus
ENSLACG00000002197	TSR1	83	58.126	ENSVPAG00000000228	TSR1	99	56.997	Vicugna_pacos
ENSLACG00000002197	TSR1	99	63.067	ENSVVUG00000021767	TSR1	99	62.822	Vulpes_vulpes
ENSLACG00000002197	TSR1	100	59.951	ENSXETG00000023797	tsr1	100	59.855	Xenopus_tropicalis
ENSLACG00000002197	TSR1	100	57.605	ENSXCOG00000009635	tsr1	100	58.134	Xiphophorus_couchianus
ENSLACG00000002197	TSR1	100	56.940	ENSXMAG00000001397	tsr1	97	57.533	Xiphophorus_maculatus