EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000002249 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 805 bases
Position: chrJH130766.1:44437-45241
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002519	RVT_1	PF00078.27	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002539	-	789	-	ENSLACP00000002519	262 (aa)	-	H2ZYP8

Gene Model

Click here to download ENSLACG00000002249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000002249	-	100	41.288	ENSLACG00000001892	-	77	41.288
ENSLACG00000002249	-	75	33.333	ENSLACG00000010227	-	83	33.333
ENSLACG00000002249	-	82	48.148	ENSLACG00000016284	-	100	48.148
ENSLACG00000002249	-	62	34.731	ENSLACG00000010373	-	70	34.731
ENSLACG00000002249	-	94	30.040	ENSLACG00000003900	-	77	30.040
ENSLACG00000002249	-	75	32.381	ENSLACG00000000714	-	98	32.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002249	-	97	37.308	ENSAPOG00000008925	-	72	37.308	Acanthochromis_polyacanthus
ENSLACG00000002249	-	88	33.898	ENSAPEG00000005752	-	62	33.080	Amphiprion_percula
ENSLACG00000002249	-	96	30.714	ENSACLG00000006798	-	87	30.714	Astatotilapia_calliptera
ENSLACG00000002249	-	99	50.189	ENSACLG00000010403	-	86	50.189	Astatotilapia_calliptera
ENSLACG00000002249	-	82	33.937	ENSACLG00000013289	-	65	33.937	Astatotilapia_calliptera
ENSLACG00000002249	-	88	35.021	ENSACLG00000013847	-	54	35.021	Astatotilapia_calliptera
ENSLACG00000002249	-	95	33.333	ENSACLG00000021935	-	73	33.193	Astatotilapia_calliptera
ENSLACG00000002249	-	88	33.891	ENSACLG00000006549	-	65	34.034	Astatotilapia_calliptera
ENSLACG00000002249	-	88	30.932	ENSACLG00000009861	-	53	30.038	Astatotilapia_calliptera
ENSLACG00000002249	-	96	32.031	ENSAMXG00000029182	-	64	32.031	Astyanax_mexicanus
ENSLACG00000002249	-	99	47.170	ENSAMXG00000043469	-	58	47.170	Astyanax_mexicanus
ENSLACG00000002249	-	97	35.878	ENSAMXG00000031032	-	68	35.878	Astyanax_mexicanus
ENSLACG00000002249	-	87	31.330	ENSAMXG00000039106	-	50	30.418	Astyanax_mexicanus
ENSLACG00000002249	-	98	36.122	ENSAMXG00000038502	-	53	36.122	Astyanax_mexicanus
ENSLACG00000002249	-	94	33.977	ENSCPBG00000001687	-	83	33.977	Chrysemys_picta_bellii
ENSLACG00000002249	-	96	35.938	ENSCPBG00000001119	-	56	35.938	Chrysemys_picta_bellii
ENSLACG00000002249	-	95	30.859	ENSCVAG00000001415	-	66	30.859	Cyprinodon_variegatus
ENSLACG00000002249	-	79	33.471	ENSGAFG00000008149	-	82	33.471	Gambusia_affinis
ENSLACG00000002249	-	96	31.154	ENSGAGG00000022000	-	91	31.154	Gopherus_agassizii
ENSLACG00000002249	-	94	33.203	ENSGAGG00000022131	-	83	33.203	Gopherus_agassizii
ENSLACG00000002249	-	97	35.000	ENSHBUG00000009088	-	71	35.000	Haplochromis_burtoni
ENSLACG00000002249	-	99	44.403	ENSIPUG00000003645	-	54	44.403	Ictalurus_punctatus
ENSLACG00000002249	-	98	31.939	ENSKMAG00000007574	-	51	31.939	Kryptolebias_marmoratus
ENSLACG00000002249	-	98	38.931	ENSLBEG00000003912	-	67	38.931	Labrus_bergylta
ENSLACG00000002249	-	99	30.741	ENSMAMG00000004646	-	56	30.741	Mastacembelus_armatus
ENSLACG00000002249	-	88	30.932	ENSMZEG00005023829	-	53	30.038	Maylandia_zebra
ENSLACG00000002249	-	93	51.190	ENSMALG00000005075	-	78	51.190	Monopterus_albus
ENSLACG00000002249	-	97	33.840	ENSMALG00000020245	-	94	33.840	Monopterus_albus
ENSLACG00000002249	-	99	49.811	ENSNBRG00000002791	-	87	49.811	Neolamprologus_brichardi
ENSLACG00000002249	-	98	34.601	ENSNBRG00000002477	-	77	34.601	Neolamprologus_brichardi
ENSLACG00000002249	-	89	33.610	ENSONIG00000018991	-	84	33.610	Oreochromis_niloticus
ENSLACG00000002249	-	97	39.080	ENSORLG00000027869	-	56	39.080	Oryzias_latipes
ENSLACG00000002249	-	96	32.234	ENSORLG00000022742	-	72	32.234	Oryzias_latipes
ENSLACG00000002249	-	95	33.984	ENSORLG00000022411	-	69	33.984	Oryzias_latipes
ENSLACG00000002249	-	99	35.849	ENSORLG00020016924	-	63	35.849	Oryzias_latipes_hni
ENSLACG00000002249	-	82	34.375	ENSORLG00020000154	-	54	34.375	Oryzias_latipes_hni
ENSLACG00000002249	-	99	33.588	ENSORLG00020009127	-	51	33.588	Oryzias_latipes_hni
ENSLACG00000002249	-	96	31.868	ENSORLG00020004454	-	68	31.868	Oryzias_latipes_hni
ENSLACG00000002249	-	93	32.669	ENSORLG00020021288	-	75	32.669	Oryzias_latipes_hni
ENSLACG00000002249	-	98	32.830	ENSORLG00020002705	-	82	32.830	Oryzias_latipes_hni
ENSLACG00000002249	-	70	37.566	ENSORLG00020016252	-	50	37.566	Oryzias_latipes_hni
ENSLACG00000002249	-	99	33.456	ENSORLG00020012706	-	67	33.456	Oryzias_latipes_hni
ENSLACG00000002249	-	98	33.083	ENSORLG00015008138	-	50	33.083	Oryzias_latipes_hsok
ENSLACG00000002249	-	85	34.348	ENSORLG00015021822	-	63	33.750	Oryzias_latipes_hsok
ENSLACG00000002249	-	96	33.716	ENSOMEG00000007764	-	85	33.716	Oryzias_melastigma
ENSLACG00000002249	-	88	36.596	ENSPKIG00000007140	-	60	34.981	Paramormyrops_kingsleyae
ENSLACG00000002249	-	78	41.627	ENSPKIG00000019619	-	74	41.627	Paramormyrops_kingsleyae
ENSLACG00000002249	-	96	31.293	ENSPKIG00000003982	-	55	31.293	Paramormyrops_kingsleyae
ENSLACG00000002249	-	96	30.714	ENSPKIG00000004057	-	62	30.714	Paramormyrops_kingsleyae
ENSLACG00000002249	-	85	31.646	ENSPSIG00000001816	-	86	31.646	Pelodiscus_sinensis
ENSLACG00000002249	-	96	31.395	ENSPSIG00000000193	-	50	31.395	Pelodiscus_sinensis
ENSLACG00000002249	-	94	32.422	ENSPSIG00000014032	-	73	32.422	Pelodiscus_sinensis
ENSLACG00000002249	-	94	30.469	ENSPSIG00000001757	-	61	30.469	Pelodiscus_sinensis
ENSLACG00000002249	-	99	47.015	ENSPSIG00000002033	-	82	47.015	Pelodiscus_sinensis
ENSLACG00000002249	-	95	30.233	ENSPSIG00000001197	-	62	30.233	Pelodiscus_sinensis
ENSLACG00000002249	-	99	30.996	ENSPSIG00000001249	-	76	30.996	Pelodiscus_sinensis
ENSLACG00000002249	-	100	32.000	ENSPSIG00000001205	-	57	32.000	Pelodiscus_sinensis
ENSLACG00000002249	-	98	36.122	ENSPMEG00000018862	-	53	36.122	Poecilia_mexicana
ENSLACG00000002249	-	99	48.679	ENSPMEG00000019465	-	60	48.679	Poecilia_mexicana
ENSLACG00000002249	-	100	30.855	ENSPREG00000005117	-	57	30.855	Poecilia_reticulata
ENSLACG00000002249	-	66	33.898	ENSPNYG00000004598	-	59	33.898	Pundamilia_nyererei
ENSLACG00000002249	-	99	44.528	ENSPNAG00000009058	-	53	44.528	Pygocentrus_nattereri
ENSLACG00000002249	-	88	35.021	ENSPNAG00000015949	-	62	35.021	Pygocentrus_nattereri
ENSLACG00000002249	-	98	46.992	ENSPNAG00000010299	-	53	46.992	Pygocentrus_nattereri
ENSLACG00000002249	-	62	40.719	ENSPNAG00000001979	-	65	40.719	Pygocentrus_nattereri
ENSLACG00000002249	-	99	46.792	ENSSFOG00015016168	-	61	46.792	Scleropages_formosus
ENSLACG00000002249	-	99	31.852	ENSSFOG00015015399	-	75	31.852	Scleropages_formosus
ENSLACG00000002249	-	88	33.473	ENSTRUG00000024970	-	78	33.473	Takifugu_rubripes
ENSLACG00000002249	-	92	31.599	ENSXMAG00000027711	-	79	31.599	Xiphophorus_maculatus
ENSLACG00000002249	-	100	35.165	ENSXMAG00000023507	-	52	35.165	Xiphophorus_maculatus