EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000002281 (Gene tree)
Gene ID: 102355404
Gene Symbol: YTHDF3
Alias: FLJ31657
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 50863 bases
Position: chrJH127714.1:45236-96098
Accession: 102355404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002553	YTH	PF04146.15	3.3e-40	1	1
ENSLACP00000002552	YTH	PF04146.15	3.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002572	YTHDF3-201	5597	XM_006005162	ENSLACP00000002552	595 (aa)	XP_006005224	H2ZYT1
ENSLACT00000002573	YTHDF3-202	1770	-	ENSLACP00000002553	589 (aa)	-	H2ZYT2

Gene Model

Click here to download ENSLACG00000002281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000002281	YTHDF3	99	66.667	ENSLACG00000011489	YTHDF2	99	65.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002281	YTHDF3	100	84.255	ENSG00000185728	YTHDF3	100	95.098	Homo_sapiens
ENSLACG00000002281	YTHDF3	99	85.299	ENSAMEG00000018113	YTHDF3	99	85.299	Ailuropoda_melanoleuca
ENSLACG00000002281	YTHDF3	97	70.486	ENSATEG00000011478	ythdf3	93	90.452	Anabas_testudineus
ENSLACG00000002281	YTHDF3	97	87.391	ENSAPLG00000011329	YTHDF3	99	88.287	Anas_platyrhynchos
ENSLACG00000002281	YTHDF3	100	83.306	ENSACAG00000016837	YTHDF3	99	85.179	Anolis_carolinensis
ENSLACG00000002281	YTHDF3	100	83.806	ENSANAG00000037920	YTHDF3	99	85.154	Aotus_nancymaae
ENSLACG00000002281	YTHDF3	97	79.561	ENSAMXG00000030366	ythdf3	99	77.090	Astyanax_mexicanus
ENSLACG00000002281	YTHDF3	100	83.139	ENSBTAG00000018557	YTHDF3	99	84.686	Bos_taurus
ENSLACG00000002281	YTHDF3	100	83.806	ENSCJAG00000009217	YTHDF3	99	85.154	Callithrix_jacchus
ENSLACG00000002281	YTHDF3	99	84.068	ENSCAFG00000007215	YTHDF3	100	84.068	Canis_familiaris
ENSLACG00000002281	YTHDF3	100	83.472	ENSCAFG00020015995	YTHDF3	100	85.019	Canis_lupus_dingo
ENSLACG00000002281	YTHDF3	100	84.167	ENSCHIG00000026460	YTHDF3	100	84.167	Capra_hircus
ENSLACG00000002281	YTHDF3	98	83.882	ENSTSYG00000009117	YTHDF3	99	83.882	Carlito_syrichta
ENSLACG00000002281	YTHDF3	99	82.572	ENSCAPG00000014006	YTHDF3	99	84.642	Cavia_aperea
ENSLACG00000002281	YTHDF3	100	83.306	ENSCPOG00000002961	YTHDF3	99	84.642	Cavia_porcellus
ENSLACG00000002281	YTHDF3	100	83.639	ENSCCAG00000022316	YTHDF3	100	85.206	Cebus_capucinus
ENSLACG00000002281	YTHDF3	100	83.806	ENSCATG00000038669	YTHDF3	99	85.340	Cercocebus_atys
ENSLACG00000002281	YTHDF3	99	82.910	ENSCLAG00000002515	YTHDF3	99	84.991	Chinchilla_lanigera
ENSLACG00000002281	YTHDF3	100	83.639	ENSCSAG00000014280	YTHDF3	99	84.983	Chlorocebus_sabaeus
ENSLACG00000002281	YTHDF3	99	83.904	ENSCHOG00000010194	YTHDF3	100	83.904	Choloepus_hoffmanni
ENSLACG00000002281	YTHDF3	100	83.472	ENSCPBG00000021405	YTHDF3	99	85.544	Chrysemys_picta_bellii
ENSLACG00000002281	YTHDF3	100	83.806	ENSCANG00000032631	YTHDF3	99	85.340	Colobus_angolensis_palliatus
ENSLACG00000002281	YTHDF3	100	82.972	ENSCGRG00001021204	Ythdf3	99	84.300	Cricetulus_griseus_chok1gshd
ENSLACG00000002281	YTHDF3	66	61.519	ENSCGRG00000008289	-	100	58.987	Cricetulus_griseus_crigri
ENSLACG00000002281	YTHDF3	99	83.670	ENSCGRG00000005613	-	99	85.938	Cricetulus_griseus_crigri
ENSLACG00000002281	YTHDF3	99	85.077	ENSDNOG00000037156	YTHDF3	98	85.077	Dasypus_novemcinctus
ENSLACG00000002281	YTHDF3	100	83.973	ENSDORG00000014699	Ythdf3	99	85.324	Dipodomys_ordii
ENSLACG00000002281	YTHDF3	96	85.263	ENSETEG00000007144	YTHDF3	100	86.014	Echinops_telfairi
ENSLACG00000002281	YTHDF3	100	83.639	ENSEASG00005016224	YTHDF3	99	84.983	Equus_asinus_asinus
ENSLACG00000002281	YTHDF3	100	83.639	ENSECAG00000011093	YTHDF3	99	84.983	Equus_caballus
ENSLACG00000002281	YTHDF3	100	83.472	ENSFCAG00000025314	YTHDF3	99	84.812	Felis_catus
ENSLACG00000002281	YTHDF3	97	87.456	ENSFALG00000005503	YTHDF3	100	88.037	Ficedula_albicollis
ENSLACG00000002281	YTHDF3	97	85.166	ENSFDAG00000002735	YTHDF3	99	85.166	Fukomys_damarensis
ENSLACG00000002281	YTHDF3	100	85.309	ENSGALG00000039774	YTHDF3	99	85.542	Gallus_gallus
ENSLACG00000002281	YTHDF3	100	83.306	ENSGAGG00000003851	YTHDF3	99	85.714	Gopherus_agassizii
ENSLACG00000002281	YTHDF3	97	85.166	ENSGGOG00000027681	YTHDF3	100	85.393	Gorilla_gorilla
ENSLACG00000002281	YTHDF3	100	83.639	ENSHGLG00000009954	YTHDF3	99	84.983	Heterocephalus_glaber_female
ENSLACG00000002281	YTHDF3	99	83.418	ENSHGLG00100012403	YTHDF3	99	85.515	Heterocephalus_glaber_male
ENSLACG00000002281	YTHDF3	100	79.545	ENSIPUG00000014157	YTHDF1	95	81.449	Ictalurus_punctatus
ENSLACG00000002281	YTHDF3	100	82.972	ENSSTOG00000027792	YTHDF3	99	84.300	Ictidomys_tridecemlineatus
ENSLACG00000002281	YTHDF3	99	83.080	ENSJJAG00000017742	Ythdf3	99	85.166	Jaculus_jaculus
ENSLACG00000002281	YTHDF3	97	72.790	ENSKMAG00000008447	ythdf3	98	83.700	Kryptolebias_marmoratus
ENSLACG00000002281	YTHDF3	100	84.140	ENSLAFG00000016052	YTHDF3	100	84.140	Loxodonta_africana
ENSLACG00000002281	YTHDF3	100	83.806	ENSMFAG00000043451	YTHDF3	100	85.393	Macaca_fascicularis
ENSLACG00000002281	YTHDF3	100	83.806	ENSMMUG00000006729	YTHDF3	100	85.393	Macaca_mulatta
ENSLACG00000002281	YTHDF3	100	83.806	ENSMNEG00000031200	YTHDF3	100	85.393	Macaca_nemestrina
ENSLACG00000002281	YTHDF3	100	83.806	ENSMLEG00000036763	YTHDF3	99	85.154	Mandrillus_leucophaeus
ENSLACG00000002281	YTHDF3	100	84.474	ENSMGAG00000011168	YTHDF3	98	85.714	Meleagris_gallopavo
ENSLACG00000002281	YTHDF3	66	81.186	ENSMAUG00000012560	Ythdf3	99	81.186	Mesocricetus_auratus
ENSLACG00000002281	YTHDF3	66	65.570	ENSMICG00000009379	-	100	67.342	Microcebus_murinus
ENSLACG00000002281	YTHDF3	99	85.249	ENSMICG00000036869	-	99	85.387	Microcebus_murinus
ENSLACG00000002281	YTHDF3	99	81.895	ENSMOCG00000011947	Ythdf3	99	84.266	Microtus_ochrogaster
ENSLACG00000002281	YTHDF3	100	84.500	ENSMODG00000008255	YTHDF3	99	86.610	Monodelphis_domestica
ENSLACG00000002281	YTHDF3	97	71.728	ENSMALG00000000147	ythdf3	92	90.816	Monopterus_albus
ENSLACG00000002281	YTHDF3	100	83.139	MGP_CAROLIEiJ_G0024863	Ythdf3	100	83.139	Mus_caroli
ENSLACG00000002281	YTHDF3	100	83.139	ENSMUSG00000047213	Ythdf3	100	83.139	Mus_musculus
ENSLACG00000002281	YTHDF3	100	82.972	MGP_PahariEiJ_G0026310	Ythdf3	100	82.972	Mus_pahari
ENSLACG00000002281	YTHDF3	100	82.972	MGP_SPRETEiJ_G0025794	Ythdf3	100	82.972	Mus_spretus
ENSLACG00000002281	YTHDF3	100	83.639	ENSMPUG00000009857	YTHDF3	99	84.983	Mustela_putorius_furo
ENSLACG00000002281	YTHDF3	99	84.327	ENSMLUG00000006541	YTHDF3	99	84.327	Myotis_lucifugus
ENSLACG00000002281	YTHDF3	90	85.019	ENSNGAG00000018434	Ythdf3	95	85.019	Nannospalax_galili
ENSLACG00000002281	YTHDF3	100	83.639	ENSNLEG00000003872	YTHDF3	99	84.983	Nomascus_leucogenys
ENSLACG00000002281	YTHDF3	99	85.495	ENSMEUG00000011285	YTHDF3	100	86.248	Notamacropus_eugenii
ENSLACG00000002281	YTHDF3	99	82.234	ENSODEG00000002033	YTHDF3	99	84.436	Octodon_degus
ENSLACG00000002281	YTHDF3	99	82.550	ENSOANG00000005053	YTHDF3	99	85.121	Ornithorhynchus_anatinus
ENSLACG00000002281	YTHDF3	100	83.973	ENSOCUG00000008723	YTHDF3	100	83.973	Oryctolagus_cuniculus
ENSLACG00000002281	YTHDF3	99	84.864	ENSOGAG00000002302	YTHDF3	99	84.864	Otolemur_garnettii
ENSLACG00000002281	YTHDF3	97	84.364	ENSOARG00000016882	YTHDF3	98	84.843	Ovis_aries
ENSLACG00000002281	YTHDF3	100	83.639	ENSPPAG00000043483	YTHDF3	99	84.983	Pan_paniscus
ENSLACG00000002281	YTHDF3	100	83.472	ENSPPRG00000004665	YTHDF3	99	84.812	Panthera_pardus
ENSLACG00000002281	YTHDF3	97	83.649	ENSPTIG00000021537	YTHDF3	100	85.019	Panthera_tigris_altaica
ENSLACG00000002281	YTHDF3	100	83.806	ENSPTRG00000049135	YTHDF3	99	85.166	Pan_troglodytes
ENSLACG00000002281	YTHDF3	100	83.806	ENSPANG00000008030	YTHDF3	99	85.340	Papio_anubis
ENSLACG00000002281	YTHDF3	99	80.068	ENSPKIG00000008298	ythdf3	99	79.110	Paramormyrops_kingsleyae
ENSLACG00000002281	YTHDF3	100	84.167	ENSPSIG00000015861	YTHDF3	99	86.224	Pelodiscus_sinensis
ENSLACG00000002281	YTHDF3	99	82.741	ENSPEMG00000020975	Ythdf3	99	84.817	Peromyscus_maniculatus_bairdii
ENSLACG00000002281	YTHDF3	99	85.520	ENSPCIG00000017629	YTHDF3	99	86.441	Phascolarctos_cinereus
ENSLACG00000002281	YTHDF3	88	91.919	ENSPPYG00000018626	YTHDF3	99	91.919	Pongo_abelii
ENSLACG00000002281	YTHDF3	99	84.957	ENSPCAG00000016282	YTHDF3	100	84.957	Procavia_capensis
ENSLACG00000002281	YTHDF3	100	83.639	ENSPCOG00000004856	YTHDF3	99	84.983	Propithecus_coquereli
ENSLACG00000002281	YTHDF3	82	96.809	ENSPVAG00000002740	YTHDF3	83	97.340	Pteropus_vampyrus
ENSLACG00000002281	YTHDF3	87	84.783	ENSPNYG00000002949	ythdf3	98	84.783	Pundamilia_nyererei
ENSLACG00000002281	YTHDF3	100	82.638	ENSRNOG00000010084	Ythdf3	99	83.959	Rattus_norvegicus
ENSLACG00000002281	YTHDF3	100	83.639	ENSRBIG00000036465	YTHDF3	99	85.166	Rhinopithecus_bieti
ENSLACG00000002281	YTHDF3	100	83.472	ENSRROG00000035231	YTHDF3	99	84.991	Rhinopithecus_roxellana
ENSLACG00000002281	YTHDF3	100	83.806	ENSSBOG00000035287	YTHDF3	99	85.154	Saimiri_boliviensis_boliviensis
ENSLACG00000002281	YTHDF3	100	83.527	ENSSHAG00000009482	YTHDF3	99	85.618	Sarcophilus_harrisii
ENSLACG00000002281	YTHDF3	99	75.042	ENSSMAG00000014999	ythdf3	96	76.420	Scophthalmus_maximus
ENSLACG00000002281	YTHDF3	97	85.639	ENSSARG00000007626	YTHDF3	99	85.639	Sorex_araneus
ENSLACG00000002281	YTHDF3	99	85.470	ENSSPUG00000009390	YTHDF3	99	86.542	Sphenodon_punctatus
ENSLACG00000002281	YTHDF3	90	85.206	ENSSSCG00000033144	YTHDF3	100	85.206	Sus_scrofa
ENSLACG00000002281	YTHDF3	97	87.238	ENSTGUG00000011243	YTHDF3	100	88.133	Taeniopygia_guttata
ENSLACG00000002281	YTHDF3	100	75.124	ENSTNIG00000012698	ythdf3	100	72.817	Tetraodon_nigroviridis
ENSLACG00000002281	YTHDF3	80	82.423	ENSTBEG00000005747	YTHDF3	80	82.423	Tupaia_belangeri
ENSLACG00000002281	YTHDF3	99	81.197	ENSTTRG00000014564	YTHDF3	100	81.880	Tursiops_truncatus
ENSLACG00000002281	YTHDF3	100	83.472	ENSUAMG00000012624	YTHDF3	99	84.812	Ursus_americanus
ENSLACG00000002281	YTHDF3	97	83.649	ENSUMAG00000014104	YTHDF3	98	83.709	Ursus_maritimus
ENSLACG00000002281	YTHDF3	99	74.359	ENSVPAG00000008104	YTHDF3	100	74.017	Vicugna_pacos
ENSLACG00000002281	YTHDF3	100	83.472	ENSVVUG00000018384	YTHDF3	99	84.812	Vulpes_vulpes
ENSLACG00000002281	YTHDF3	100	84.474	ENSXETG00000021659	ythdf3	100	83.639	Xenopus_tropicalis
ENSLACG00000002281	YTHDF3	99	73.456	ENSXCOG00000009687	ythdf3	98	74.182	Xiphophorus_couchianus
ENSLACG00000002281	YTHDF3	99	74.290	ENSXMAG00000009698	ythdf3	98	74.699	Xiphophorus_maculatus