EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000002414 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 109960 bases
Position: chrJH128372.1:48592-158551
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002699	MBD	PF01429.19	2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002721	-	1881	-	ENSLACP00000002699	627 (aa)	-	H2ZZ78

Gene Model

Click here to download ENSLACG00000002414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002414	-	51	65.079	ENSG00000141644	MBD1	80	68.571	Homo_sapiens
ENSLACG00000002414	-	52	62.500	ENSAMEG00000000238	MBD1	63	38.571	Ailuropoda_melanoleuca
ENSLACG00000002414	-	79	37.580	ENSACIG00000010590	mbd1b	61	37.580	Amphilophus_citrinellus
ENSLACG00000002414	-	80	39.103	ENSATEG00000009608	mbd1b	68	38.953	Anabas_testudineus
ENSLACG00000002414	-	56	39.706	ENSACAG00000006091	-	100	39.706	Anolis_carolinensis
ENSLACG00000002414	-	51	65.079	ENSANAG00000036253	MBD1	88	37.546	Aotus_nancymaae
ENSLACG00000002414	-	52	62.500	ENSBTAG00000003801	MBD1	94	33.741	Bos_taurus
ENSLACG00000002414	-	51	65.079	ENSCJAG00000004959	MBD1	87	37.951	Callithrix_jacchus
ENSLACG00000002414	-	52	62.500	ENSCAFG00000018928	MBD1	63	39.141	Canis_familiaris
ENSLACG00000002414	-	58	38.663	ENSCAFG00020024272	MBD1	65	39.141	Canis_lupus_dingo
ENSLACG00000002414	-	52	62.500	ENSCHIG00000021134	MBD1	65	40.152	Capra_hircus
ENSLACG00000002414	-	51	65.079	ENSTSYG00000000509	MBD1	87	35.917	Carlito_syrichta
ENSLACG00000002414	-	58	32.723	ENSCPOG00000001671	MBD1	50	64.062	Cavia_porcellus
ENSLACG00000002414	-	58	40.704	ENSCCAG00000034600	MBD1	71	41.250	Cebus_capucinus
ENSLACG00000002414	-	78	36.000	ENSCATG00000029959	MBD1	96	35.145	Cercocebus_atys
ENSLACG00000002414	-	52	64.062	ENSCLAG00000007457	MBD1	59	38.038	Chinchilla_lanigera
ENSLACG00000002414	-	58	39.747	ENSCSAG00000018070	MBD1	65	40.351	Chlorocebus_sabaeus
ENSLACG00000002414	-	51	65.079	ENSCANG00000033425	MBD1	87	36.673	Colobus_angolensis_palliatus
ENSLACG00000002414	-	58	39.340	ENSCGRG00001014843	Mbd1	65	39.340	Cricetulus_griseus_chok1gshd
ENSLACG00000002414	-	55	54.545	ENSCSEG00000009082	mbd1b	55	47.727	Cynoglossus_semilaevis
ENSLACG00000002414	-	79	38.514	ENSCVAG00000001167	mbd1b	65	38.650	Cyprinodon_variegatus
ENSLACG00000002414	-	87	38.125	ENSDARG00000025699	mbd1b	62	38.125	Danio_rerio
ENSLACG00000002414	-	52	65.574	ENSDNOG00000015998	MBD1	72	34.858	Dasypus_novemcinctus
ENSLACG00000002414	-	52	62.500	ENSEASG00005003857	MBD1	96	35.634	Equus_asinus_asinus
ENSLACG00000002414	-	52	62.500	ENSECAG00000011497	MBD1	52	40.201	Equus_caballus
ENSLACG00000002414	-	81	38.037	ENSELUG00000004375	mbd1b	82	32.084	Esox_lucius
ENSLACG00000002414	-	78	36.346	ENSFCAG00000015730	MBD1	96	37.072	Felis_catus
ENSLACG00000002414	-	58	55.385	ENSFHEG00000020120	mbd1b	69	55.385	Fundulus_heteroclitus
ENSLACG00000002414	-	94	31.751	ENSGACG00000012106	-	98	31.588	Gasterosteus_aculeatus
ENSLACG00000002414	-	51	65.079	ENSGGOG00000016966	MBD1	87	37.115	Gorilla_gorilla
ENSLACG00000002414	-	52	64.062	ENSHGLG00000008740	MBD1	65	39.903	Heterocephalus_glaber_female
ENSLACG00000002414	-	79	36.601	ENSIPUG00000015243	-	72	39.877	Ictalurus_punctatus
ENSLACG00000002414	-	58	40.049	ENSSTOG00000007780	MBD1	65	40.049	Ictidomys_tridecemlineatus
ENSLACG00000002414	-	58	37.108	ENSLAFG00000031328	MBD1	64	37.108	Loxodonta_africana
ENSLACG00000002414	-	51	65.079	ENSMFAG00000026335	MBD1	96	36.673	Macaca_fascicularis
ENSLACG00000002414	-	51	65.079	ENSMMUG00000009050	MBD1	88	35.490	Macaca_mulatta
ENSLACG00000002414	-	51	65.079	ENSMNEG00000038822	MBD1	96	36.673	Macaca_nemestrina
ENSLACG00000002414	-	51	65.079	ENSMLEG00000043121	MBD1	87	36.673	Mandrillus_leucophaeus
ENSLACG00000002414	-	56	30.048	ENSMAMG00000023341	-	59	30.529	Mastacembelus_armatus
ENSLACG00000002414	-	53	65.079	ENSMICG00000006414	MBD1	88	37.743	Microcebus_murinus
ENSLACG00000002414	-	79	40.741	ENSMMOG00000011607	mbd1b	90	32.787	Mola_mola
ENSLACG00000002414	-	99	34.869	ENSMODG00000001286	-	97	35.814	Monodelphis_domestica
ENSLACG00000002414	-	64	36.645	MGP_PahariEiJ_G0019128	Mbd1	72	37.086	Mus_pahari
ENSLACG00000002414	-	56	38.631	MGP_SPRETEiJ_G0023304	Mbd1	66	39.568	Mus_spretus
ENSLACG00000002414	-	58	38.333	ENSMPUG00000008843	MBD1	64	38.571	Mustela_putorius_furo
ENSLACG00000002414	-	52	65.625	ENSMLUG00000008286	MBD1	64	39.618	Myotis_lucifugus
ENSLACG00000002414	-	51	65.079	ENSNLEG00000011661	-	96	34.058	Nomascus_leucogenys
ENSLACG00000002414	-	57	39.651	ENSOPRG00000007647	MBD1	64	39.950	Ochotona_princeps
ENSLACG00000002414	-	80	37.888	ENSONIG00000020289	mbd1b	68	37.888	Oreochromis_niloticus
ENSLACG00000002414	-	58	39.130	ENSOANG00000014593	-	77	39.855	Ornithorhynchus_anatinus
ENSLACG00000002414	-	52	66.667	ENSOCUG00000006554	MBD1	66	39.234	Oryctolagus_cuniculus
ENSLACG00000002414	-	56	58.462	ENSORLG00000029390	mbd1b	83	31.421	Oryzias_latipes
ENSLACG00000002414	-	71	58.462	ENSORLG00020000575	mbd1b	82	32.741	Oryzias_latipes_hni
ENSLACG00000002414	-	71	58.462	ENSORLG00015014812	mbd1b	83	31.421	Oryzias_latipes_hsok
ENSLACG00000002414	-	56	58.462	ENSOMEG00000023660	mbd1b	81	31.156	Oryzias_melastigma
ENSLACG00000002414	-	58	35.934	ENSOGAG00000003784	MBD1	63	36.905	Otolemur_garnettii
ENSLACG00000002414	-	52	61.538	ENSOARG00000004218	MBD1	63	37.767	Ovis_aries
ENSLACG00000002414	-	78	34.672	ENSPPAG00000038886	MBD1	96	34.854	Pan_paniscus
ENSLACG00000002414	-	78	36.346	ENSPPRG00000021387	MBD1	96	37.072	Panthera_pardus
ENSLACG00000002414	-	52	62.500	ENSPTIG00000021231	MBD1	96	36.952	Panthera_tigris_altaica
ENSLACG00000002414	-	51	65.079	ENSPTRG00000010021	MBD1	96	34.854	Pan_troglodytes
ENSLACG00000002414	-	51	65.079	ENSPANG00000010867	MBD1	87	36.673	Papio_anubis
ENSLACG00000002414	-	99	39.689	ENSPCIG00000027937	-	98	39.689	Phascolarctos_cinereus
ENSLACG00000002414	-	80	39.355	ENSPFOG00000007511	mbd1b	52	55.385	Poecilia_formosa
ENSLACG00000002414	-	80	38.710	ENSPLAG00000021258	mbd1b	68	38.710	Poecilia_latipinna
ENSLACG00000002414	-	58	39.747	ENSPPYG00000009158	MBD1	59	40.100	Pongo_abelii
ENSLACG00000002414	-	57	38.875	ENSPCAG00000001648	MBD1	64	38.875	Procavia_capensis
ENSLACG00000002414	-	78	36.742	ENSPCOG00000012450	MBD1	87	37.524	Propithecus_coquereli
ENSLACG00000002414	-	63	63.768	ENSPNAG00000018075	mbd1b	55	63.768	Pygocentrus_nattereri
ENSLACG00000002414	-	58	37.838	ENSRBIG00000041294	MBD1	62	39.084	Rhinopithecus_bieti
ENSLACG00000002414	-	51	65.079	ENSRROG00000032517	MBD1	96	37.165	Rhinopithecus_roxellana
ENSLACG00000002414	-	51	65.079	ENSSBOG00000027169	MBD1	88	35.791	Saimiri_boliviensis_boliviensis
ENSLACG00000002414	-	99	30.792	ENSSFOG00015008591	-	77	30.838	Scleropages_formosus
ENSLACG00000002414	-	80	40.000	ENSSMAG00000014640	mbd1b	59	39.634	Scophthalmus_maximus
ENSLACG00000002414	-	67	53.623	ENSSDUG00000012996	mbd1b	58	44.094	Seriola_dumerili
ENSLACG00000002414	-	94	31.070	ENSSLDG00000012422	mbd1b	69	31.250	Seriola_lalandi_dorsalis
ENSLACG00000002414	-	74	41.525	ENSSPAG00000021447	mbd1b	64	39.568	Stegastes_partitus
ENSLACG00000002414	-	58	42.819	ENSSSCG00000004516	MBD1	96	36.994	Sus_scrofa
ENSLACG00000002414	-	81	36.095	ENSTRUG00000013422	mbd1b	68	36.095	Takifugu_rubripes
ENSLACG00000002414	-	58	39.747	ENSTTRG00000015523	MBD1	65	39.798	Tursiops_truncatus
ENSLACG00000002414	-	58	42.204	ENSUAMG00000004752	MBD1	63	42.440	Ursus_americanus
ENSLACG00000002414	-	52	62.500	ENSUMAG00000002947	MBD1	65	40.000	Ursus_maritimus