EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000002477 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2512 bases
Position: chrJH129409.1:50150-52661
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002770	RVT_1	PF00078.27	1.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002792	-	2430	-	ENSLACP00000002770	810 (aa)	-	H2ZZE9

Gene Model

Click here to download ENSLACG00000002477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000002477	-	99	42.359	ENSLACG00000015903	-	98	42.359
ENSLACG00000002477	-	83	51.389	ENSLACG00000005123	-	88	51.389
ENSLACG00000002477	-	92	47.732	ENSLACG00000007383	-	95	47.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002477	-	87	38.830	ENSORLG00000030308	-	79	39.096	Oryzias_latipes
ENSLACG00000002477	-	87	38.830	ENSORLG00000030578	-	79	39.096	Oryzias_latipes
ENSLACG00000002477	-	100	40.233	ENSORLG00015002919	-	81	40.233	Oryzias_latipes_hsok
ENSLACG00000002477	-	88	38.867	ENSORLG00015013910	-	87	39.130	Oryzias_latipes_hsok
ENSLACG00000002477	-	50	56.522	ENSPSIG00000001413	-	95	56.522	Pelodiscus_sinensis
ENSLACG00000002477	-	55	58.071	ENSPSIG00000015886	-	68	58.071	Pelodiscus_sinensis
ENSLACG00000002477	-	54	55.745	ENSPSIG00000000993	-	90	55.745	Pelodiscus_sinensis
ENSLACG00000002477	-	83	55.022	ENSPSIG00000000618	-	98	55.022	Pelodiscus_sinensis
ENSLACG00000002477	-	70	53.156	ENSPSIG00000001546	-	100	53.156	Pelodiscus_sinensis
ENSLACG00000002477	-	54	55.675	ENSPSIG00000001353	-	94	55.675	Pelodiscus_sinensis
ENSLACG00000002477	-	54	55.745	ENSPSIG00000001300	-	95	55.745	Pelodiscus_sinensis
ENSLACG00000002477	-	54	55.745	ENSPSIG00000001486	-	93	55.745	Pelodiscus_sinensis
ENSLACG00000002477	-	100	53.728	ENSPSIG00000001896	-	80	53.728	Pelodiscus_sinensis
ENSLACG00000002477	-	54	55.556	ENSPSIG00000001231	-	94	55.556	Pelodiscus_sinensis
ENSLACG00000002477	-	100	53.728	ENSPSIG00000000229	-	80	53.728	Pelodiscus_sinensis
ENSLACG00000002477	-	100	53.728	ENSPSIG00000000630	-	80	53.728	Pelodiscus_sinensis
ENSLACG00000002477	-	80	41.026	ENSPSIG00000001059	-	99	41.026	Pelodiscus_sinensis
ENSLACG00000002477	-	54	55.484	ENSPSIG00000000044	-	94	55.484	Pelodiscus_sinensis
ENSLACG00000002477	-	69	53.041	ENSPSIG00000000041	-	100	53.041	Pelodiscus_sinensis
ENSLACG00000002477	-	100	53.728	ENSPSIG00000001155	-	93	53.728	Pelodiscus_sinensis
ENSLACG00000002477	-	50	56.522	ENSPSIG00000001884	-	95	56.522	Pelodiscus_sinensis
ENSLACG00000002477	-	53	55.411	ENSPSIG00000001221	-	94	55.411	Pelodiscus_sinensis
ENSLACG00000002477	-	73	42.265	ENSPSIG00000001022	-	95	42.265	Pelodiscus_sinensis
ENSLACG00000002477	-	100	53.728	ENSPSIG00000001183	-	80	53.728	Pelodiscus_sinensis
ENSLACG00000002477	-	89	53.755	ENSPSIG00000000104	-	98	53.755	Pelodiscus_sinensis