EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000002512 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 2277 bases
Position: chrJH127429.1:51226-53502
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002808	RVT_1	PF00078.27	2.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002830	-	1668	-	ENSLACP00000002808	556 (aa)	-	H2ZZI7

Gene Model

Click here to download ENSLACG00000002512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002512's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000002512	-	99	30.085	ENSLACG00000003991	-	67	30.085
ENSLACG00000002512	-	98	38.021	ENSLACG00000009011	-	81	38.021
ENSLACG00000002512	-	100	34.790	ENSLACG00000018380	-	86	34.932
ENSLACG00000002512	-	97	32.612	ENSLACG00000008366	-	90	32.612
ENSLACG00000002512	-	67	32.287	ENSLACG00000009347	-	61	32.287
ENSLACG00000002512	-	100	36.159	ENSLACG00000004343	-	75	36.159
ENSLACG00000002512	-	99	30.035	ENSLACG00000015558	-	82	30.035
ENSLACG00000002512	-	94	41.250	ENSLACG00000016980	-	59	41.667
ENSLACG00000002512	-	100	79.417	ENSLACG00000011272	-	82	79.417
ENSLACG00000002512	-	99	70.992	ENSLACG00000002665	-	66	70.992
ENSLACG00000002512	-	99	37.415	ENSLACG00000005007	-	90	37.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002512	-	84	31.579	ENSATEG00000006997	-	56	31.579	Anabas_testudineus
ENSLACG00000002512	-	95	30.827	ENSACLG00000000373	-	51	30.827	Astatotilapia_calliptera
ENSLACG00000002512	-	95	30.827	ENSACLG00000012657	-	51	30.827	Astatotilapia_calliptera
ENSLACG00000002512	-	77	31.801	ENSACLG00000021355	-	56	31.801	Astatotilapia_calliptera
ENSLACG00000002512	-	99	30.936	ENSACLG00000016581	-	53	30.936	Astatotilapia_calliptera
ENSLACG00000002512	-	85	30.599	ENSAMXG00000043821	-	70	30.599	Astyanax_mexicanus
ENSLACG00000002512	-	96	31.900	ENSAMXG00000036113	-	54	31.900	Astyanax_mexicanus
ENSLACG00000002512	-	76	31.183	ENSAMXG00000038480	-	63	31.183	Astyanax_mexicanus
ENSLACG00000002512	-	83	34.211	ENSCVAG00000020907	-	65	34.211	Cyprinodon_variegatus
ENSLACG00000002512	-	97	32.770	ENSLOCG00000009957	-	67	32.770	Lepisosteus_oculatus
ENSLACG00000002512	-	99	30.565	ENSMZEG00005024252	-	70	30.565	Maylandia_zebra
ENSLACG00000002512	-	76	32.973	ENSORLG00000029184	-	56	32.973	Oryzias_latipes
ENSLACG00000002512	-	85	30.916	ENSORLG00000025268	-	59	30.916	Oryzias_latipes
ENSLACG00000002512	-	92	33.831	ENSORLG00020017608	-	50	33.831	Oryzias_latipes_hni
ENSLACG00000002512	-	92	30.769	ENSORLG00020015203	-	51	30.769	Oryzias_latipes_hni
ENSLACG00000002512	-	52	30.272	ENSORLG00020016924	-	69	30.272	Oryzias_latipes_hni
ENSLACG00000002512	-	86	31.518	ENSORLG00015000379	-	67	31.518	Oryzias_latipes_hsok
ENSLACG00000002512	-	65	31.518	ENSORLG00015013109	-	59	31.518	Oryzias_latipes_hsok
ENSLACG00000002512	-	97	31.552	ENSORLG00015022127	-	74	31.552	Oryzias_latipes_hsok
ENSLACG00000002512	-	51	31.722	ENSSFOG00015024061	-	54	31.722	Scleropages_formosus
ENSLACG00000002512	-	97	30.000	ENSTNIG00000006817	-	53	30.000	Tetraodon_nigroviridis