EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000002523 (Gene tree)
Gene ID: 102363893
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: RAB29%2C member RAS oncogene family
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 13887 bases
Position: chrJH129082.1:51526-65412
Accession: 102363893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002824	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002846	RAB29-201	4965	XM_006010907	ENSLACP00000002824	206 (aa)	XP_006010969	H2ZZK3

Gene Model

Click here to download ENSLACG00000002523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000002523	RAB29	66	36.296	ENSLACG00000018793	RAN	88	36.296
ENSLACG00000002523	RAB29	83	35.465	ENSLACG00000015770	RAB7A	83	35.465
ENSLACG00000002523	RAB29	83	36.471	ENSLACG00000012869	RAB1A	80	36.471
ENSLACG00000002523	RAB29	81	35.329	ENSLACG00000011256	rab18b	79	35.329
ENSLACG00000002523	RAB29	82	34.320	ENSLACG00000002332	-	77	34.320
ENSLACG00000002523	RAB29	97	35.323	ENSLACG00000005168	RAB6A	93	35.323
ENSLACG00000002523	RAB29	83	37.427	ENSLACG00000016857	-	76	37.427
ENSLACG00000002523	RAB29	82	32.544	ENSLACG00000012674	si:dkey-34d22.5	79	32.544
ENSLACG00000002523	RAB29	57	30.328	ENSLACG00000013122	RRAS2	69	30.328
ENSLACG00000002523	RAB29	80	37.349	ENSLACG00000014446	RAB2B	97	37.349
ENSLACG00000002523	RAB29	84	32.961	ENSLACG00000013571	RAB33B	75	32.961
ENSLACG00000002523	RAB29	99	35.122	ENSLACG00000012717	RAB1B	98	35.122
ENSLACG00000002523	RAB29	51	43.396	ENSLACG00000018444	RAB35	52	43.396
ENSLACG00000002523	RAB29	79	34.969	ENSLACG00000016518	-	50	34.969
ENSLACG00000002523	RAB29	79	30.539	ENSLACG00000012088	rheb	86	30.539
ENSLACG00000002523	RAB29	81	34.132	ENSLACG00000009310	rab18a	79	34.132
ENSLACG00000002523	RAB29	98	32.524	ENSLACG00000011181	RAB14	87	32.524
ENSLACG00000002523	RAB29	82	33.136	ENSLACG00000016074	RAB39B	77	33.136
ENSLACG00000002523	RAB29	70	39.041	ENSLACG00000004025	RAB23	64	39.873
ENSLACG00000002523	RAB29	97	37.745	ENSLACG00000022111	-	94	37.745
ENSLACG00000002523	RAB29	95	31.122	ENSLACG00000011157	RAB25	89	31.122
ENSLACG00000002523	RAB29	85	36.313	ENSLACG00000008103	-	96	36.313
ENSLACG00000002523	RAB29	85	35.429	ENSLACG00000017891	RAB9B	82	35.429
ENSLACG00000002523	RAB29	97	35.644	ENSLACG00000013980	rab41	92	35.644
ENSLACG00000002523	RAB29	58	39.024	ENSLACG00000003722	rabl2	51	39.024
ENSLACG00000002523	RAB29	89	35.870	ENSLACG00000006407	RAB30	88	35.870
ENSLACG00000002523	RAB29	67	37.410	ENSLACG00000011557	zgc:101559	58	37.410
ENSLACG00000002523	RAB29	83	37.143	ENSLACG00000012184	RAB11A	77	37.143
ENSLACG00000002523	RAB29	83	34.884	ENSLACG00000008809	zgc:100918	83	34.884
ENSLACG00000002523	RAB29	97	32.500	ENSLACG00000007092	RAB22A	97	32.500
ENSLACG00000002523	RAB29	81	36.905	ENSLACG00000016974	RAB11B	94	36.905
ENSLACG00000002523	RAB29	80	38.182	ENSLACG00000012521	RAB2A	75	38.182
ENSLACG00000002523	RAB29	83	35.673	ENSLACG00000011380	rab11al	76	35.673
ENSLACG00000002523	RAB29	82	33.136	ENSLACG00000012755	-	78	33.136
ENSLACG00000002523	RAB29	97	31.000	ENSLACG00000004663	RAB5A	89	31.000
ENSLACG00000002523	RAB29	90	35.567	ENSLACG00000010461	RAB12	76	35.567

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002523	RAB29	91	58.730	ENSATEG00000024739	RAB29	92	58.730	Anabas_testudineus
ENSLACG00000002523	RAB29	79	58.896	ENSACLG00000008602	RAB29	99	58.896	Astatotilapia_calliptera
ENSLACG00000002523	RAB29	89	60.109	ENSCVAG00000014038	RAB29	88	60.109	Cyprinodon_variegatus
ENSLACG00000002523	RAB29	98	58.128	ENSEBUG00000002259	RAB29	97	58.128	Eptatretus_burgeri
ENSLACG00000002523	RAB29	80	57.927	ENSFHEG00000015993	RAB29	80	57.927	Fundulus_heteroclitus
ENSLACG00000002523	RAB29	79	62.963	ENSGMOG00000018475	RAB29	98	62.963	Gadus_morhua
ENSLACG00000002523	RAB29	98	52.941	ENSGAFG00000000629	RAB29	99	52.941	Gambusia_affinis
ENSLACG00000002523	RAB29	99	49.268	ENSGACG00000010473	RAB29	98	49.268	Gasterosteus_aculeatus
ENSLACG00000002523	RAB29	86	56.425	ENSHBUG00000012594	RAB29	86	56.425	Haplochromis_burtoni
ENSLACG00000002523	RAB29	83	55.882	ENSKMAG00000017150	-	76	55.882	Kryptolebias_marmoratus
ENSLACG00000002523	RAB29	98	55.610	ENSLBEG00000018812	RAB29	99	55.610	Labrus_bergylta
ENSLACG00000002523	RAB29	98	55.610	ENSLBEG00000006152	-	99	55.610	Labrus_bergylta
ENSLACG00000002523	RAB29	90	58.289	ENSMAMG00000006963	RAB29	91	58.289	Mastacembelus_armatus
ENSLACG00000002523	RAB29	84	56.897	ENSMZEG00005026799	RAB29	84	56.897	Maylandia_zebra
ENSLACG00000002523	RAB29	98	52.451	ENSMALG00000018436	RAB29	89	52.451	Monopterus_albus
ENSLACG00000002523	RAB29	78	61.491	ENSNBRG00000008714	RAB29	71	61.491	Neolamprologus_brichardi
ENSLACG00000002523	RAB29	98	50.476	ENSONIG00000014892	RAB29	99	50.476	Oreochromis_niloticus
ENSLACG00000002523	RAB29	98	50.495	ENSORLG00000027892	RAB29	84	56.725	Oryzias_latipes
ENSLACG00000002523	RAB29	98	49.010	ENSORLG00020005240	RAB29	84	54.971	Oryzias_latipes_hni
ENSLACG00000002523	RAB29	83	55.556	ENSORLG00015020441	-	84	55.556	Oryzias_latipes_hsok
ENSLACG00000002523	RAB29	98	51.980	ENSOMEG00000000336	RAB29	99	51.980	Oryzias_melastigma
ENSLACG00000002523	RAB29	85	56.571	ENSPMGG00000008290	-	100	51.942	Periophthalmus_magnuspinnatus
ENSLACG00000002523	RAB29	83	58.480	ENSPFOG00000013066	RAB29	82	58.480	Poecilia_formosa
ENSLACG00000002523	RAB29	84	58.960	ENSPLAG00000002600	RAB29	81	58.960	Poecilia_latipinna
ENSLACG00000002523	RAB29	83	59.064	ENSPMEG00000021807	RAB29	83	59.064	Poecilia_mexicana
ENSLACG00000002523	RAB29	98	52.941	ENSPREG00000020276	RAB29	99	52.941	Poecilia_reticulata
ENSLACG00000002523	RAB29	84	56.897	ENSPNYG00000015355	RAB29	84	56.897	Pundamilia_nyererei
ENSLACG00000002523	RAB29	98	52.451	ENSSDUG00000006543	RAB29	99	52.451	Seriola_dumerili
ENSLACG00000002523	RAB29	100	69.565	ENSSPUG00000015007	RAB29	100	69.565	Sphenodon_punctatus
ENSLACG00000002523	RAB29	98	53.431	ENSSPAG00000002062	RAB29	99	53.431	Stegastes_partitus
ENSLACG00000002523	RAB29	98	51.961	ENSXCOG00000016370	RAB29	99	51.961	Xiphophorus_couchianus
ENSLACG00000002523	RAB29	98	52.941	ENSXMAG00000029823	RAB29	99	52.941	Xiphophorus_maculatus