EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000002647 (Gene tree)
Gene ID: 102360913
Gene Symbol: CNOT4
Alias: CLONE243|NOT4|NOT4H
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 134489 bases
Position: chrJH126919.1:55061-189549
Accession: 102360913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000002961	RRM_1	PF00076.22	9.5e-06	1	1
ENSLACP00000002960	RRM_1	PF00076.22	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000002985	CNOT4-201	3836	XM_005997076	ENSLACP00000002960	764 (aa)	XP_005997138	H2ZZY9
ENSLACT00000002986	CNOT4-202	3620	XM_005997079	ENSLACP00000002961	692 (aa)	XP_005997141	H2ZZZ0

Gene Model

Click here to download ENSLACG00000002647's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002647	CNOT4	99	83.694	ENSG00000080802	CNOT4	100	83.694	Homo_sapiens
ENSLACG00000002647	CNOT4	94	71.316	ENSAPOG00000016272	cnot4a	99	68.819	Acanthochromis_polyacanthus
ENSLACG00000002647	CNOT4	95	83.149	ENSAMEG00000012081	CNOT4	100	81.344	Ailuropoda_melanoleuca
ENSLACG00000002647	CNOT4	99	70.138	ENSACIG00000003011	cnot4a	100	69.790	Amphilophus_citrinellus
ENSLACG00000002647	CNOT4	99	71.516	ENSAOCG00000010792	cnot4a	100	70.320	Amphiprion_ocellaris
ENSLACG00000002647	CNOT4	99	71.516	ENSAPEG00000004680	cnot4a	100	70.320	Amphiprion_percula
ENSLACG00000002647	CNOT4	99	71.012	ENSATEG00000017580	cnot4a	100	70.530	Anabas_testudineus
ENSLACG00000002647	CNOT4	99	90.065	ENSAPLG00000016441	CNOT4	100	90.065	Anas_platyrhynchos
ENSLACG00000002647	CNOT4	99	88.366	ENSACAG00000011154	CNOT4	100	88.366	Anolis_carolinensis
ENSLACG00000002647	CNOT4	99	83.694	ENSANAG00000032156	CNOT4	100	83.694	Aotus_nancymaae
ENSLACG00000002647	CNOT4	99	71.319	ENSACLG00000002514	cnot4a	100	70.530	Astatotilapia_calliptera
ENSLACG00000002647	CNOT4	99	70.588	ENSAMXG00000001373	cnot4a	100	69.231	Astyanax_mexicanus
ENSLACG00000002647	CNOT4	99	72.093	ENSAMXG00000011473	cnot4b	100	72.761	Astyanax_mexicanus
ENSLACG00000002647	CNOT4	99	83.838	ENSBTAG00000017919	CNOT4	100	83.838	Bos_taurus
ENSLACG00000002647	CNOT4	99	83.694	ENSCJAG00000012532	CNOT4	100	83.694	Callithrix_jacchus
ENSLACG00000002647	CNOT4	99	83.838	ENSCAFG00000003223	CNOT4	100	83.838	Canis_familiaris
ENSLACG00000002647	CNOT4	99	83.550	ENSCAFG00020000093	CNOT4	100	83.550	Canis_lupus_dingo
ENSLACG00000002647	CNOT4	99	83.694	ENSCHIG00000010955	CNOT4	100	83.694	Capra_hircus
ENSLACG00000002647	CNOT4	99	83.838	ENSTSYG00000000893	CNOT4	100	83.838	Carlito_syrichta
ENSLACG00000002647	CNOT4	99	81.385	ENSCAPG00000006213	CNOT4	100	81.385	Cavia_aperea
ENSLACG00000002647	CNOT4	99	83.838	ENSCPOG00000011526	CNOT4	100	83.838	Cavia_porcellus
ENSLACG00000002647	CNOT4	99	83.983	ENSCCAG00000024414	CNOT4	94	100.000	Cebus_capucinus
ENSLACG00000002647	CNOT4	99	83.694	ENSCATG00000022607	CNOT4	100	83.694	Cercocebus_atys
ENSLACG00000002647	CNOT4	99	83.838	ENSCLAG00000001857	CNOT4	100	83.838	Chinchilla_lanigera
ENSLACG00000002647	CNOT4	99	82.745	ENSCSAG00000009096	CNOT4	100	82.745	Chlorocebus_sabaeus
ENSLACG00000002647	CNOT4	63	99.465	ENSCHOG00000010412	CNOT4	65	99.465	Choloepus_hoffmanni
ENSLACG00000002647	CNOT4	99	90.948	ENSCPBG00000004959	CNOT4	100	90.948	Chrysemys_picta_bellii
ENSLACG00000002647	CNOT4	99	83.550	ENSCANG00000029319	CNOT4	100	83.550	Colobus_angolensis_palliatus
ENSLACG00000002647	CNOT4	99	83.405	ENSCGRG00001014651	Cnot4	100	83.405	Cricetulus_griseus_chok1gshd
ENSLACG00000002647	CNOT4	99	83.405	ENSCGRG00000005727	Cnot4	100	83.405	Cricetulus_griseus_crigri
ENSLACG00000002647	CNOT4	98	69.546	ENSCSEG00000015080	cnot4a	93	70.558	Cynoglossus_semilaevis
ENSLACG00000002647	CNOT4	99	70.642	ENSCVAG00000009399	cnot4a	100	70.028	Cyprinodon_variegatus
ENSLACG00000002647	CNOT4	99	71.499	ENSDARG00000007639	cnot4b	100	71.623	Danio_rerio
ENSLACG00000002647	CNOT4	99	71.473	ENSDARG00000007045	cnot4a	100	71.536	Danio_rerio
ENSLACG00000002647	CNOT4	99	82.461	ENSDNOG00000009409	CNOT4	100	82.461	Dasypus_novemcinctus
ENSLACG00000002647	CNOT4	99	83.694	ENSDORG00000012268	Cnot4	100	83.694	Dipodomys_ordii
ENSLACG00000002647	CNOT4	98	79.388	ENSETEG00000013407	CNOT4	92	79.388	Echinops_telfairi
ENSLACG00000002647	CNOT4	99	83.694	ENSEASG00005014430	CNOT4	100	83.694	Equus_asinus_asinus
ENSLACG00000002647	CNOT4	99	83.694	ENSECAG00000020262	CNOT4	100	83.694	Equus_caballus
ENSLACG00000002647	CNOT4	99	66.620	ENSELUG00000008742	cnot4a	100	66.620	Esox_lucius
ENSLACG00000002647	CNOT4	99	62.078	ENSELUG00000011540	cnot4b	100	62.753	Esox_lucius
ENSLACG00000002647	CNOT4	99	83.550	ENSFCAG00000011904	CNOT4	100	83.550	Felis_catus
ENSLACG00000002647	CNOT4	99	90.065	ENSFALG00000011194	CNOT4	100	90.065	Ficedula_albicollis
ENSLACG00000002647	CNOT4	99	83.694	ENSFDAG00000013525	CNOT4	100	83.694	Fukomys_damarensis
ENSLACG00000002647	CNOT4	99	69.335	ENSFHEG00000006608	cnot4a	100	69.068	Fundulus_heteroclitus
ENSLACG00000002647	CNOT4	95	65.140	ENSGMOG00000001329	cnot4a	99	65.390	Gadus_morhua
ENSLACG00000002647	CNOT4	99	90.909	ENSGALG00000011682	CNOT4	100	90.909	Gallus_gallus
ENSLACG00000002647	CNOT4	99	70.285	ENSGACG00000004276	cnot4a	100	70.285	Gasterosteus_aculeatus
ENSLACG00000002647	CNOT4	99	91.379	ENSGAGG00000017331	CNOT4	100	91.379	Gopherus_agassizii
ENSLACG00000002647	CNOT4	96	78.763	ENSGGOG00000000142	CNOT4	99	81.690	Gorilla_gorilla
ENSLACG00000002647	CNOT4	99	71.319	ENSHBUG00000000027	cnot4a	100	70.530	Haplochromis_burtoni
ENSLACG00000002647	CNOT4	99	83.694	ENSHGLG00000011533	CNOT4	100	83.694	Heterocephalus_glaber_female
ENSLACG00000002647	CNOT4	86	83.838	ENSHGLG00100013058	CNOT4	94	83.838	Heterocephalus_glaber_male
ENSLACG00000002647	CNOT4	99	70.183	ENSHCOG00000015815	cnot4a	100	69.608	Hippocampus_comes
ENSLACG00000002647	CNOT4	99	69.021	ENSIPUG00000006393	cnot4	100	69.021	Ictalurus_punctatus
ENSLACG00000002647	CNOT4	99	69.830	ENSIPUG00000016994	cnot4b	100	70.624	Ictalurus_punctatus
ENSLACG00000002647	CNOT4	99	83.261	ENSSTOG00000007717	CNOT4	100	83.261	Ictidomys_tridecemlineatus
ENSLACG00000002647	CNOT4	86	69.646	ENSJJAG00000019991	-	94	69.646	Jaculus_jaculus
ENSLACG00000002647	CNOT4	99	83.405	ENSJJAG00000016618	Cnot4	100	83.405	Jaculus_jaculus
ENSLACG00000002647	CNOT4	99	68.980	ENSKMAG00000004581	cnot4a	100	68.980	Kryptolebias_marmoratus
ENSLACG00000002647	CNOT4	99	71.933	ENSLBEG00000009999	cnot4a	100	70.900	Labrus_bergylta
ENSLACG00000002647	CNOT4	99	84.727	ENSLOCG00000016126	cnot4a	100	83.592	Lepisosteus_oculatus
ENSLACG00000002647	CNOT4	99	82.353	ENSLAFG00000000709	CNOT4	100	82.353	Loxodonta_africana
ENSLACG00000002647	CNOT4	99	83.694	ENSMFAG00000046349	CNOT4	100	83.694	Macaca_fascicularis
ENSLACG00000002647	CNOT4	99	83.694	ENSMMUG00000016181	CNOT4	100	83.694	Macaca_mulatta
ENSLACG00000002647	CNOT4	99	83.405	ENSMNEG00000042164	CNOT4	100	83.405	Macaca_nemestrina
ENSLACG00000002647	CNOT4	99	83.694	ENSMLEG00000032709	CNOT4	100	83.694	Mandrillus_leucophaeus
ENSLACG00000002647	CNOT4	99	71.779	ENSMAMG00000023194	cnot4a	100	70.443	Mastacembelus_armatus
ENSLACG00000002647	CNOT4	99	71.319	ENSMZEG00005007312	cnot4a	100	70.530	Maylandia_zebra
ENSLACG00000002647	CNOT4	99	89.804	ENSMGAG00000011788	CNOT4	100	89.804	Meleagris_gallopavo
ENSLACG00000002647	CNOT4	99	83.694	ENSMAUG00000020415	Cnot4	100	83.694	Mesocricetus_auratus
ENSLACG00000002647	CNOT4	99	83.983	ENSMICG00000001667	CNOT4	100	84.632	Microcebus_murinus
ENSLACG00000002647	CNOT4	99	83.261	ENSMOCG00000020955	Cnot4	100	83.261	Microtus_ochrogaster
ENSLACG00000002647	CNOT4	93	70.923	ENSMMOG00000014565	cnot4a	97	70.923	Mola_mola
ENSLACG00000002647	CNOT4	99	84.052	ENSMODG00000014068	CNOT4	100	84.052	Monodelphis_domestica
ENSLACG00000002647	CNOT4	94	71.958	ENSMALG00000011662	cnot4a	89	71.711	Monopterus_albus
ENSLACG00000002647	CNOT4	99	83.022	MGP_CAROLIEiJ_G0028217	Cnot4	100	83.022	Mus_caroli
ENSLACG00000002647	CNOT4	99	83.405	ENSMUSG00000038784	Cnot4	100	83.405	Mus_musculus
ENSLACG00000002647	CNOT4	99	83.261	MGP_PahariEiJ_G0021974	Cnot4	100	83.261	Mus_pahari
ENSLACG00000002647	CNOT4	99	83.261	MGP_SPRETEiJ_G0029216	Cnot4	100	83.261	Mus_spretus
ENSLACG00000002647	CNOT4	99	82.745	ENSMPUG00000004089	CNOT4	100	82.745	Mustela_putorius_furo
ENSLACG00000002647	CNOT4	99	83.838	ENSMLUG00000008260	CNOT4	100	83.838	Myotis_lucifugus
ENSLACG00000002647	CNOT4	99	83.261	ENSNGAG00000015030	Cnot4	100	83.261	Nannospalax_galili
ENSLACG00000002647	CNOT4	99	67.087	ENSNBRG00000021144	cnot4a	100	67.227	Neolamprologus_brichardi
ENSLACG00000002647	CNOT4	99	83.405	ENSNLEG00000013352	CNOT4	100	83.405	Nomascus_leucogenys
ENSLACG00000002647	CNOT4	80	82.461	ENSOPRG00000001023	CNOT4	81	82.262	Ochotona_princeps
ENSLACG00000002647	CNOT4	99	83.838	ENSODEG00000012975	CNOT4	100	83.838	Octodon_degus
ENSLACG00000002647	CNOT4	99	71.166	ENSONIG00000008656	cnot4a	100	70.530	Oreochromis_niloticus
ENSLACG00000002647	CNOT4	99	83.812	ENSOANG00000005006	CNOT4	100	83.812	Ornithorhynchus_anatinus
ENSLACG00000002647	CNOT4	99	83.007	ENSOCUG00000013448	CNOT4	100	83.007	Oryctolagus_cuniculus
ENSLACG00000002647	CNOT4	99	70.444	ENSORLG00000003727	cnot4a	100	69.458	Oryzias_latipes
ENSLACG00000002647	CNOT4	99	70.679	ENSORLG00020015684	cnot4a	100	69.641	Oryzias_latipes_hni
ENSLACG00000002647	CNOT4	99	70.138	ENSORLG00015008470	cnot4a	100	69.212	Oryzias_latipes_hsok
ENSLACG00000002647	CNOT4	99	69.771	ENSOMEG00000011084	cnot4a	100	68.919	Oryzias_melastigma
ENSLACG00000002647	CNOT4	99	83.268	ENSOGAG00000015499	CNOT4	100	83.268	Otolemur_garnettii
ENSLACG00000002647	CNOT4	99	82.745	ENSOARG00000008803	CNOT4	100	82.745	Ovis_aries
ENSLACG00000002647	CNOT4	99	83.550	ENSPPAG00000041937	CNOT4	100	83.550	Pan_paniscus
ENSLACG00000002647	CNOT4	99	83.838	ENSPPRG00000023940	CNOT4	100	83.838	Panthera_pardus
ENSLACG00000002647	CNOT4	99	83.405	ENSPTIG00000016601	CNOT4	100	83.405	Panthera_tigris_altaica
ENSLACG00000002647	CNOT4	99	83.694	ENSPTRG00000019727	CNOT4	100	83.694	Pan_troglodytes
ENSLACG00000002647	CNOT4	99	83.550	ENSPANG00000017724	CNOT4	100	83.550	Papio_anubis
ENSLACG00000002647	CNOT4	99	69.949	ENSPKIG00000018137	cnot4a	100	69.949	Paramormyrops_kingsleyae
ENSLACG00000002647	CNOT4	99	89.164	ENSPSIG00000011256	CNOT4	100	89.164	Pelodiscus_sinensis
ENSLACG00000002647	CNOT4	99	68.811	ENSPMGG00000005671	cnot4a	100	68.811	Periophthalmus_magnuspinnatus
ENSLACG00000002647	CNOT4	99	83.405	ENSPEMG00000021566	Cnot4	100	83.405	Peromyscus_maniculatus_bairdii
ENSLACG00000002647	CNOT4	99	84.127	ENSPCIG00000029622	CNOT4	96	83.660	Phascolarctos_cinereus
ENSLACG00000002647	CNOT4	99	69.863	ENSPFOG00000002228	cnot4a	100	69.155	Poecilia_formosa
ENSLACG00000002647	CNOT4	99	69.863	ENSPLAG00000001780	cnot4a	100	69.155	Poecilia_latipinna
ENSLACG00000002647	CNOT4	99	70.015	ENSPMEG00000006852	cnot4a	100	69.278	Poecilia_mexicana
ENSLACG00000002647	CNOT4	99	70.229	ENSPREG00000008171	cnot4a	100	69.448	Poecilia_reticulata
ENSLACG00000002647	CNOT4	99	82.614	ENSPPYG00000018026	CNOT4	100	82.614	Pongo_abelii
ENSLACG00000002647	CNOT4	99	83.983	ENSPCOG00000019907	CNOT4	100	84.632	Propithecus_coquereli
ENSLACG00000002647	CNOT4	95	81.492	ENSPVAG00000004905	CNOT4	90	81.267	Pteropus_vampyrus
ENSLACG00000002647	CNOT4	99	71.319	ENSPNYG00000004276	cnot4a	100	70.530	Pundamilia_nyererei
ENSLACG00000002647	CNOT4	99	71.197	ENSPNAG00000020433	cnot4a	100	71.446	Pygocentrus_nattereri
ENSLACG00000002647	CNOT4	99	74.178	ENSPNAG00000008679	cnot4b	100	74.601	Pygocentrus_nattereri
ENSLACG00000002647	CNOT4	99	82.092	ENSRNOG00000010795	Cnot4	100	82.092	Rattus_norvegicus
ENSLACG00000002647	CNOT4	99	83.694	ENSRBIG00000043977	CNOT4	100	83.694	Rhinopithecus_bieti
ENSLACG00000002647	CNOT4	99	83.694	ENSSBOG00000020808	CNOT4	100	83.694	Saimiri_boliviensis_boliviensis
ENSLACG00000002647	CNOT4	99	84.314	ENSSHAG00000013639	CNOT4	100	84.314	Sarcophilus_harrisii
ENSLACG00000002647	CNOT4	99	71.429	ENSSFOG00015002019	cnot4a	99	71.429	Scleropages_formosus
ENSLACG00000002647	CNOT4	99	76.190	ENSSFOG00015017285	CNOT4	100	76.040	Scleropages_formosus
ENSLACG00000002647	CNOT4	99	71.626	ENSSMAG00000008614	cnot4a	100	70.777	Scophthalmus_maximus
ENSLACG00000002647	CNOT4	99	66.571	ENSSDUG00000018585	cnot4b	100	66.829	Seriola_dumerili
ENSLACG00000002647	CNOT4	99	72.546	ENSSDUG00000022635	cnot4a	100	71.481	Seriola_dumerili
ENSLACG00000002647	CNOT4	99	72.546	ENSSLDG00000015770	cnot4a	100	71.481	Seriola_lalandi_dorsalis
ENSLACG00000002647	CNOT4	99	62.136	ENSSLDG00000014347	cnot4b	100	60.821	Seriola_lalandi_dorsalis
ENSLACG00000002647	CNOT4	99	84.993	ENSSPUG00000004677	CNOT4	100	84.993	Sphenodon_punctatus
ENSLACG00000002647	CNOT4	99	71.933	ENSSPAG00000012329	cnot4a	100	70.530	Stegastes_partitus
ENSLACG00000002647	CNOT4	99	83.838	ENSSSCG00000021354	CNOT4	100	83.838	Sus_scrofa
ENSLACG00000002647	CNOT4	99	90.065	ENSTGUG00000009161	CNOT4	100	90.065	Taeniopygia_guttata
ENSLACG00000002647	CNOT4	99	69.939	ENSTRUG00000016861	cnot4a	100	68.681	Takifugu_rubripes
ENSLACG00000002647	CNOT4	99	65.693	ENSTNIG00000016000	cnot4a	100	66.582	Tetraodon_nigroviridis
ENSLACG00000002647	CNOT4	95	77.901	ENSTBEG00000002202	CNOT4	90	77.689	Tupaia_belangeri
ENSLACG00000002647	CNOT4	95	82.735	ENSTTRG00000005122	CNOT4	90	82.480	Tursiops_truncatus
ENSLACG00000002647	CNOT4	99	83.838	ENSUAMG00000026759	CNOT4	100	83.838	Ursus_americanus
ENSLACG00000002647	CNOT4	99	84.012	ENSUMAG00000015351	CNOT4	94	84.175	Ursus_maritimus
ENSLACG00000002647	CNOT4	99	83.550	ENSVVUG00000006200	CNOT4	100	83.550	Vulpes_vulpes
ENSLACG00000002647	CNOT4	99	85.515	ENSXETG00000010594	cnot4	100	85.515	Xenopus_tropicalis
ENSLACG00000002647	CNOT4	89	66.411	ENSXCOG00000020824	cnot4a	98	66.383	Xiphophorus_couchianus
ENSLACG00000002647	CNOT4	99	69.771	ENSXMAG00000016984	cnot4a	100	68.834	Xiphophorus_maculatus