EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000002786 (Gene tree)
Gene ID: 102358078
Gene Symbol: -
Alias: -
Full Name: la-related protein 6-like
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 7191 bases
Position: chrJH127407.1:58747-65937
Accession: 102358078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000003110	La	PF05383.17	8.6e-21	1	1
ENSLACP00000022397	La	PF05383.17	1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000025837	-	2501	XM_006002719	ENSLACP00000022397	467 (aa)	XP_006002781	M3XI41
ENSLACT00000003140	-	1251	-	ENSLACP00000003110	416 (aa)	-	H3A0D9

Gene Model

Click here to download ENSLACG00000002786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002786's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000002786	-	98	45.412	ENSLACG00000018706	LARP6	80	45.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002786	-	96	44.498	ENSG00000166173	LARP6	83	41.805	Homo_sapiens
ENSLACG00000002786	-	97	45.921	ENSAPOG00000021773	larp6a	63	44.695	Acanthochromis_polyacanthus
ENSLACG00000002786	-	97	44.575	ENSAMEG00000008897	LARP6	96	41.981	Ailuropoda_melanoleuca
ENSLACG00000002786	-	95	45.606	ENSACIG00000005166	larp6a	84	44.368	Amphilophus_citrinellus
ENSLACG00000002786	-	96	45.991	ENSAOCG00000002284	larp6a	62	44.749	Amphiprion_ocellaris
ENSLACG00000002786	-	95	46.318	ENSAPEG00000008077	larp6a	83	45.057	Amphiprion_percula
ENSLACG00000002786	-	95	46.793	ENSATEG00000004018	larp6a	61	45.287	Anabas_testudineus
ENSLACG00000002786	-	98	42.488	ENSAPLG00000009914	LARP6	99	41.244	Anas_platyrhynchos
ENSLACG00000002786	-	96	43.750	ENSACAG00000008613	LARP6	96	43.780	Anolis_carolinensis
ENSLACG00000002786	-	96	44.258	ENSANAG00000024860	LARP6	83	41.568	Aotus_nancymaae
ENSLACG00000002786	-	97	45.688	ENSACLG00000018561	larp6a	61	44.695	Astatotilapia_calliptera
ENSLACG00000002786	-	95	45.667	ENSAMXG00000029387	larp6a	63	44.444	Astyanax_mexicanus
ENSLACG00000002786	-	99	50.835	ENSAMXG00000036816	-	96	50.594	Astyanax_mexicanus
ENSLACG00000002786	-	98	44.159	ENSBTAG00000003915	LARP6	85	40.835	Bos_taurus
ENSLACG00000002786	-	96	44.153	ENSCJAG00000046236	-	83	41.469	Callithrix_jacchus
ENSLACG00000002786	-	96	44.153	ENSCJAG00000018642	-	83	41.469	Callithrix_jacchus
ENSLACG00000002786	-	98	44.626	ENSCAFG00000017616	LARP6	97	42.056	Canis_familiaris
ENSLACG00000002786	-	98	44.626	ENSCAFG00020007296	LARP6	85	42.056	Canis_lupus_dingo
ENSLACG00000002786	-	98	44.159	ENSCHIG00000013742	LARP6	85	40.835	Capra_hircus
ENSLACG00000002786	-	98	44.316	ENSTSYG00000028124	LARP6	85	41.299	Carlito_syrichta
ENSLACG00000002786	-	98	44.262	ENSCAPG00000015452	LARP6	97	41.218	Cavia_aperea
ENSLACG00000002786	-	98	44.262	ENSCPOG00000022687	LARP6	89	40.089	Cavia_porcellus
ENSLACG00000002786	-	96	44.258	ENSCCAG00000036320	LARP6	83	41.568	Cebus_capucinus
ENSLACG00000002786	-	96	44.258	ENSCATG00000042432	LARP6	83	41.568	Cercocebus_atys
ENSLACG00000002786	-	98	43.560	ENSCLAG00000007893	LARP6	85	40.233	Chinchilla_lanigera
ENSLACG00000002786	-	96	44.258	ENSCSAG00000013672	LARP6	83	41.568	Chlorocebus_sabaeus
ENSLACG00000002786	-	97	43.735	ENSCHOG00000003318	LARP6	91	39.462	Choloepus_hoffmanni
ENSLACG00000002786	-	98	44.340	ENSCPBG00000010771	LARP6	81	43.218	Chrysemys_picta_bellii
ENSLACG00000002786	-	96	44.258	ENSCANG00000025833	LARP6	96	41.568	Colobus_angolensis_palliatus
ENSLACG00000002786	-	96	43.614	ENSCGRG00001024472	Larp6	84	40.984	Cricetulus_griseus_chok1gshd
ENSLACG00000002786	-	96	43.614	ENSCGRG00000004527	Larp6	84	40.984	Cricetulus_griseus_crigri
ENSLACG00000002786	-	95	44.181	ENSCSEG00000011196	larp6a	62	41.647	Cynoglossus_semilaevis
ENSLACG00000002786	-	95	45.498	ENSCVAG00000009605	larp6a	61	45.024	Cyprinodon_variegatus
ENSLACG00000002786	-	95	45.714	ENSDARG00000005355	larp6a	95	41.844	Danio_rerio
ENSLACG00000002786	-	98	44.028	ENSDNOG00000042993	LARP6	85	41.163	Dasypus_novemcinctus
ENSLACG00000002786	-	98	45.433	ENSDORG00000023910	Larp6	85	42.466	Dipodomys_ordii
ENSLACG00000002786	-	73	50.000	ENSETEG00000020390	LARP6	55	50.000	Echinops_telfairi
ENSLACG00000002786	-	98	44.316	ENSEASG00005005490	LARP6	62	41.763	Equus_asinus_asinus
ENSLACG00000002786	-	98	44.626	ENSECAG00000014190	LARP6	92	41.299	Equus_caballus
ENSLACG00000002786	-	97	45.139	ENSELUG00000007341	larp6a	64	43.722	Esox_lucius
ENSLACG00000002786	-	98	44.496	ENSFCAG00000001361	LARP6	84	41.163	Felis_catus
ENSLACG00000002786	-	98	43.765	ENSFALG00000012389	LARP6	89	43.318	Ficedula_albicollis
ENSLACG00000002786	-	98	44.262	ENSFDAG00000019994	LARP6	89	39.744	Fukomys_damarensis
ENSLACG00000002786	-	95	45.261	ENSFHEG00000010312	larp6a	60	44.893	Fundulus_heteroclitus
ENSLACG00000002786	-	99	43.458	ENSGALG00000004046	LARP6	85	41.743	Gallus_gallus
ENSLACG00000002786	-	95	45.972	ENSGAFG00000009426	larp6a	62	44.893	Gambusia_affinis
ENSLACG00000002786	-	95	46.588	ENSGACG00000014622	larp6a	94	46.118	Gasterosteus_aculeatus
ENSLACG00000002786	-	85	45.845	ENSGAGG00000010802	LARP6	54	44.474	Gopherus_agassizii
ENSLACG00000002786	-	96	44.498	ENSGGOG00000024151	LARP6	96	41.805	Gorilla_gorilla
ENSLACG00000002786	-	97	45.688	ENSHBUG00000021014	larp6a	61	44.695	Haplochromis_burtoni
ENSLACG00000002786	-	98	44.262	ENSHGLG00000015112	LARP6	84	40.930	Heterocephalus_glaber_female
ENSLACG00000002786	-	98	44.262	ENSHGLG00100013159	LARP6	97	41.218	Heterocephalus_glaber_male
ENSLACG00000002786	-	95	45.024	ENSHCOG00000001241	larp6a	80	44.235	Hippocampus_comes
ENSLACG00000002786	-	98	48.201	ENSIPUG00000002828	-	96	48.798	Ictalurus_punctatus
ENSLACG00000002786	-	95	44.651	ENSIPUG00000010187	larp6	64	43.155	Ictalurus_punctatus
ENSLACG00000002786	-	98	44.626	ENSSTOG00000024279	LARP6	90	41.299	Ictidomys_tridecemlineatus
ENSLACG00000002786	-	96	43.510	ENSJJAG00000011013	Larp6	90	39.644	Jaculus_jaculus
ENSLACG00000002786	-	95	45.735	ENSKMAG00000001702	larp6a	59	44.138	Kryptolebias_marmoratus
ENSLACG00000002786	-	95	45.324	ENSLBEG00000000170	larp6a	82	44.316	Labrus_bergylta
ENSLACG00000002786	-	99	64.218	ENSLOCG00000008547	-	87	63.205	Lepisosteus_oculatus
ENSLACG00000002786	-	95	48.551	ENSLOCG00000014592	larp6a	61	44.952	Lepisosteus_oculatus
ENSLACG00000002786	-	98	42.925	ENSLAFG00000016343	LARP6	93	40.281	Loxodonta_africana
ENSLACG00000002786	-	96	44.258	ENSMFAG00000035507	LARP6	91	41.568	Macaca_fascicularis
ENSLACG00000002786	-	96	44.258	ENSMMUG00000004429	LARP6	85	41.568	Macaca_mulatta
ENSLACG00000002786	-	96	44.258	ENSMNEG00000045335	LARP6	83	41.568	Macaca_nemestrina
ENSLACG00000002786	-	96	44.258	ENSMLEG00000038587	LARP6	96	41.568	Mandrillus_leucophaeus
ENSLACG00000002786	-	95	46.556	ENSMAMG00000005261	larp6a	61	45.287	Mastacembelus_armatus
ENSLACG00000002786	-	97	45.688	ENSMZEG00005005774	larp6a	61	44.695	Maylandia_zebra
ENSLACG00000002786	-	98	43.026	ENSMGAG00000005077	LARP6	99	41.299	Meleagris_gallopavo
ENSLACG00000002786	-	98	43.632	ENSMAUG00000018486	Larp6	84	41.218	Mesocricetus_auratus
ENSLACG00000002786	-	98	43.326	ENSMICG00000011234	LARP6	89	40.089	Microcebus_murinus
ENSLACG00000002786	-	96	43.541	ENSMOCG00000010492	Larp6	85	40.741	Microtus_ochrogaster
ENSLACG00000002786	-	95	46.667	ENSMMOG00000016284	larp6a	81	45.952	Mola_mola
ENSLACG00000002786	-	98	42.523	ENSMODG00000009034	LARP6	85	40.444	Monodelphis_domestica
ENSLACG00000002786	-	95	45.606	ENSMALG00000014439	larp6a	82	43.678	Monopterus_albus
ENSLACG00000002786	-	98	43.059	MGP_CAROLIEiJ_G0032314	Larp6	85	41.570	Mus_caroli
ENSLACG00000002786	-	98	43.868	ENSMUSG00000034839	Larp6	85	40.972	Mus_musculus
ENSLACG00000002786	-	98	44.706	MGP_PahariEiJ_G0015180	Larp6	85	41.801	Mus_pahari
ENSLACG00000002786	-	98	42.118	MGP_SPRETEiJ_G0033452	Larp6	84	41.628	Mus_spretus
ENSLACG00000002786	-	97	44.235	ENSMPUG00000017086	LARP6	97	41.355	Mustela_putorius_furo
ENSLACG00000002786	-	98	44.000	ENSMLUG00000010319	LARP6	84	41.725	Myotis_lucifugus
ENSLACG00000002786	-	96	44.471	ENSNGAG00000014238	Larp6	85	41.667	Nannospalax_galili
ENSLACG00000002786	-	97	45.688	ENSNBRG00000008120	larp6a	84	44.470	Neolamprologus_brichardi
ENSLACG00000002786	-	96	44.498	ENSNLEG00000013691	LARP6	83	41.805	Nomascus_leucogenys
ENSLACG00000002786	-	65	47.222	ENSMEUG00000002270	LARP6	65	46.667	Notamacropus_eugenii
ENSLACG00000002786	-	65	45.161	ENSOPRG00000004868	-	97	40.625	Ochotona_princeps
ENSLACG00000002786	-	96	43.333	ENSODEG00000015958	LARP6	86	39.408	Octodon_degus
ENSLACG00000002786	-	95	45.843	ENSONIG00000002901	larp6a	80	45.606	Oreochromis_niloticus
ENSLACG00000002786	-	96	42.029	ENSOCUG00000009306	LARP6	98	39.767	Oryctolagus_cuniculus
ENSLACG00000002786	-	95	46.445	ENSORLG00000014256	larp6a	82	45.735	Oryzias_latipes
ENSLACG00000002786	-	95	46.682	ENSORLG00020019657	larp6a	60	45.972	Oryzias_latipes_hni
ENSLACG00000002786	-	95	46.445	ENSORLG00015017915	larp6a	60	45.735	Oryzias_latipes_hsok
ENSLACG00000002786	-	95	46.682	ENSOMEG00000017049	larp6a	60	45.735	Oryzias_melastigma
ENSLACG00000002786	-	98	43.662	ENSOGAG00000000522	LARP6	85	41.958	Otolemur_garnettii
ENSLACG00000002786	-	98	43.925	ENSOARG00000018750	LARP6	96	40.888	Ovis_aries
ENSLACG00000002786	-	96	44.498	ENSPPAG00000031247	LARP6	96	41.805	Pan_paniscus
ENSLACG00000002786	-	98	43.326	ENSPPRG00000011282	LARP6	84	40.930	Panthera_pardus
ENSLACG00000002786	-	98	44.496	ENSPTIG00000015318	LARP6	84	41.452	Panthera_tigris_altaica
ENSLACG00000002786	-	96	44.498	ENSPTRG00000007234	LARP6	83	41.805	Pan_troglodytes
ENSLACG00000002786	-	96	44.258	ENSPANG00000016362	LARP6	83	41.568	Papio_anubis
ENSLACG00000002786	-	94	46.040	ENSPKIG00000020103	larp6a	77	45.122	Paramormyrops_kingsleyae
ENSLACG00000002786	-	95	46.262	ENSPKIG00000004511	LARP6	62	40.402	Paramormyrops_kingsleyae
ENSLACG00000002786	-	68	70.707	ENSPSIG00000009071	LARP6	84	70.707	Pelodiscus_sinensis
ENSLACG00000002786	-	95	46.318	ENSPMGG00000006958	larp6a	83	45.606	Periophthalmus_magnuspinnatus
ENSLACG00000002786	-	96	43.373	ENSPEMG00000012909	Larp6	84	40.749	Peromyscus_maniculatus_bairdii
ENSLACG00000002786	-	98	42.857	ENSPCIG00000020765	LARP6	81	41.628	Phascolarctos_cinereus
ENSLACG00000002786	-	95	45.498	ENSPFOG00000014175	larp6a	80	44.893	Poecilia_formosa
ENSLACG00000002786	-	95	45.498	ENSPLAG00000011105	larp6a	59	44.893	Poecilia_latipinna
ENSLACG00000002786	-	95	45.261	ENSPMEG00000011085	larp6a	60	44.550	Poecilia_mexicana
ENSLACG00000002786	-	95	44.787	ENSPREG00000008067	larp6a	60	44.418	Poecilia_reticulata
ENSLACG00000002786	-	96	44.498	ENSPPYG00000006604	LARP6	83	41.805	Pongo_abelii
ENSLACG00000002786	-	73	54.088	ENSPCAG00000014197	LARP6	61	54.088	Procavia_capensis
ENSLACG00000002786	-	98	44.393	ENSPCOG00000022934	LARP6	85	41.531	Propithecus_coquereli
ENSLACG00000002786	-	98	44.393	ENSPVAG00000005618	LARP6	84	41.355	Pteropus_vampyrus
ENSLACG00000002786	-	97	45.688	ENSPNYG00000009835	larp6a	84	44.470	Pundamilia_nyererei
ENSLACG00000002786	-	95	45.199	ENSPNAG00000017966	larp6a	69	43.692	Pygocentrus_nattereri
ENSLACG00000002786	-	98	44.393	ENSRNOG00000012438	Larp6	85	41.531	Rattus_norvegicus
ENSLACG00000002786	-	96	44.258	ENSRBIG00000032902	LARP6	84	41.568	Rhinopithecus_bieti
ENSLACG00000002786	-	96	44.258	ENSRROG00000043074	LARP6	83	41.568	Rhinopithecus_roxellana
ENSLACG00000002786	-	96	44.498	ENSSBOG00000024190	LARP6	96	41.805	Saimiri_boliviensis_boliviensis
ENSLACG00000002786	-	98	42.958	ENSSHAG00000018495	LARP6	97	40.732	Sarcophilus_harrisii
ENSLACG00000002786	-	94	41.565	ENSSFOG00015002254	LARP6	78	40.625	Scleropages_formosus
ENSLACG00000002786	-	97	46.318	ENSSFOG00015023268	larp6a	83	44.235	Scleropages_formosus
ENSLACG00000002786	-	95	45.823	ENSSMAG00000009953	larp6a	59	45.107	Scophthalmus_maximus
ENSLACG00000002786	-	95	46.081	ENSSDUG00000007438	larp6a	61	44.828	Seriola_dumerili
ENSLACG00000002786	-	95	46.081	ENSSLDG00000016647	larp6a	61	44.828	Seriola_lalandi_dorsalis
ENSLACG00000002786	-	97	42.790	ENSSPUG00000011312	LARP6	97	41.452	Sphenodon_punctatus
ENSLACG00000002786	-	96	45.991	ENSSPAG00000020502	larp6a	62	44.749	Stegastes_partitus
ENSLACG00000002786	-	98	42.453	ENSSSCG00000004974	LARP6	84	40.047	Sus_scrofa
ENSLACG00000002786	-	98	43.529	ENSTGUG00000005808	LARP6	99	43.287	Taeniopygia_guttata
ENSLACG00000002786	-	97	46.370	ENSTRUG00000003151	larp6a	62	46.370	Takifugu_rubripes
ENSLACG00000002786	-	95	43.602	ENSTNIG00000011926	larp6a	84	42.891	Tetraodon_nigroviridis
ENSLACG00000002786	-	95	44.231	ENSTBEG00000015077	LARP6	95	41.827	Tupaia_belangeri
ENSLACG00000002786	-	97	45.412	ENSUAMG00000010467	LARP6	83	42.588	Ursus_americanus
ENSLACG00000002786	-	98	44.860	ENSVVUG00000015227	LARP6	92	42.290	Vulpes_vulpes
ENSLACG00000002786	-	97	43.262	ENSXETG00000020340	larp6	83	42.326	Xenopus_tropicalis
ENSLACG00000002786	-	95	46.209	ENSXCOG00000012654	larp6a	84	45.131	Xiphophorus_couchianus
ENSLACG00000002786	-	95	46.209	ENSXMAG00000021015	larp6a	57	45.131	Xiphophorus_maculatus