EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000002986 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 42669 bases
Position: chrJH130678.1:66393-109061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000003338	rRNA_proc-arch	PF13234.6	2.5e-11	1	1
ENSLACP00000003338	DEAD	PF00270.29	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000003368	-	3568	-	ENSLACP00000003338	1175 (aa)	-	H3A117

Gene Model

Click here to download ENSLACG00000002986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000002986's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000002986	-	73	59.950	ENSG00000204351	SKIV2L	98	53.933	Homo_sapiens
ENSLACG00000002986	-	60	62.329	ENSAPOG00000008257	skiv2l	56	62.329	Acanthochromis_polyacanthus
ENSLACG00000002986	-	73	59.194	ENSAMEG00000002078	SKIV2L	71	60.192	Ailuropoda_melanoleuca
ENSLACG00000002986	-	59	63.605	ENSACIG00000016719	skiv2l	57	63.605	Amphilophus_citrinellus
ENSLACG00000002986	-	60	63.356	ENSAOCG00000017352	skiv2l	56	63.356	Amphiprion_ocellaris
ENSLACG00000002986	-	60	63.356	ENSAPEG00000001055	skiv2l	56	63.356	Amphiprion_percula
ENSLACG00000002986	-	60	62.925	ENSATEG00000007601	skiv2l	56	62.925	Anabas_testudineus
ENSLACG00000002986	-	62	66.667	ENSACAG00000011746	SKIV2L	59	66.667	Anolis_carolinensis
ENSLACG00000002986	-	69	59.950	ENSANAG00000037992	SKIV2L	71	60.192	Aotus_nancymaae
ENSLACG00000002986	-	60	64.041	ENSACLG00000006886	skiv2l	56	64.041	Astatotilapia_calliptera
ENSLACG00000002986	-	59	62.245	ENSAMXG00000011517	skiv2l	56	62.245	Astyanax_mexicanus
ENSLACG00000002986	-	73	59.194	ENSBTAG00000005587	SKIV2L	71	59.712	Bos_taurus
ENSLACG00000002986	-	73	60.553	ENSCJAG00000002263	SKIV2L	71	60.192	Callithrix_jacchus
ENSLACG00000002986	-	61	59.446	ENSCAFG00000000679	SKIV2L	71	60.432	Canis_familiaris
ENSLACG00000002986	-	61	59.446	ENSCAFG00020000948	SKIV2L	71	60.432	Canis_lupus_dingo
ENSLACG00000002986	-	73	58.438	ENSCHIG00000012897	SKIV2L	71	58.993	Capra_hircus
ENSLACG00000002986	-	73	58.586	ENSTSYG00000012133	SKIV2L	71	59.712	Carlito_syrichta
ENSLACG00000002986	-	73	58.942	ENSCPOG00000001307	SKIV2L	70	58.753	Cavia_porcellus
ENSLACG00000002986	-	73	59.698	ENSCCAG00000026206	SKIV2L	71	59.952	Cebus_capucinus
ENSLACG00000002986	-	73	59.950	ENSCATG00000036901	SKIV2L	71	60.732	Cercocebus_atys
ENSLACG00000002986	-	73	59.548	ENSCLAG00000007678	SKIV2L	71	59.712	Chinchilla_lanigera
ENSLACG00000002986	-	73	59.701	ENSCSAG00000008988	SKIV2L	71	60.432	Chlorocebus_sabaeus
ENSLACG00000002986	-	50	78.363	ENSCPBG00000000343	SKIV2L	53	78.363	Chrysemys_picta_bellii
ENSLACG00000002986	-	55	52.203	ENSCING00000005576	-	56	52.203	Ciona_intestinalis
ENSLACG00000002986	-	73	59.698	ENSCANG00000039709	SKIV2L	71	60.432	Colobus_angolensis_palliatus
ENSLACG00000002986	-	73	60.050	ENSCGRG00001008385	Skiv2l	71	59.712	Cricetulus_griseus_chok1gshd
ENSLACG00000002986	-	60	61.224	ENSCSEG00000011326	skiv2l	55	61.224	Cynoglossus_semilaevis
ENSLACG00000002986	-	60	63.946	ENSCVAG00000003072	skiv2l	51	84.328	Cyprinodon_variegatus
ENSLACG00000002986	-	60	60.884	ENSDARG00000062206	skiv2l	56	60.884	Danio_rerio
ENSLACG00000002986	-	61	59.950	ENSDNOG00000037590	SKIV2L	60	59.952	Dasypus_novemcinctus
ENSLACG00000002986	-	53	45.322	FBgn0039117	tst	52	45.401	Drosophila_melanogaster
ENSLACG00000002986	-	53	51.835	ENSEBUG00000013680	-	55	53.670	Eptatretus_burgeri
ENSLACG00000002986	-	66	61.514	ENSEASG00005015534	SKIV2L	68	62.776	Equus_asinus_asinus
ENSLACG00000002986	-	67	58.942	ENSECAG00000021823	SKIV2L	66	60.192	Equus_caballus
ENSLACG00000002986	-	69	80.000	ENSELUG00000000181	skiv2l	69	80.000	Esox_lucius
ENSLACG00000002986	-	73	59.453	ENSFCAG00000004519	SKIV2L	71	59.952	Felis_catus
ENSLACG00000002986	-	73	58.690	ENSFDAG00000009438	SKIV2L	70	59.569	Fukomys_damarensis
ENSLACG00000002986	-	60	63.265	ENSFHEG00000008853	skiv2l	50	83.582	Fundulus_heteroclitus
ENSLACG00000002986	-	59	59.649	ENSGMOG00000005926	skiv2l	56	59.649	Gadus_morhua
ENSLACG00000002986	-	60	64.286	ENSGAFG00000002382	skiv2l	56	64.286	Gambusia_affinis
ENSLACG00000002986	-	60	64.286	ENSGACG00000002927	skiv2l	56	64.286	Gasterosteus_aculeatus
ENSLACG00000002986	-	73	60.202	ENSGGOG00000002270	SKIV2L	71	60.432	Gorilla_gorilla
ENSLACG00000002986	-	60	64.041	ENSHBUG00000000726	skiv2l	56	64.041	Haplochromis_burtoni
ENSLACG00000002986	-	72	60.957	ENSHGLG00000016596	SKIV2L	70	60.337	Heterocephalus_glaber_female
ENSLACG00000002986	-	72	60.957	ENSHGLG00100014161	SKIV2L	69	60.337	Heterocephalus_glaber_male
ENSLACG00000002986	-	58	59.524	ENSHCOG00000007191	skiv2l	53	59.524	Hippocampus_comes
ENSLACG00000002986	-	60	61.565	ENSIPUG00000016263	skiv2l	56	61.565	Ictalurus_punctatus
ENSLACG00000002986	-	75	59.857	ENSSTOG00000014596	SKIV2L	71	59.472	Ictidomys_tridecemlineatus
ENSLACG00000002986	-	69	59.343	ENSLAFG00000014231	SKIV2L	67	59.952	Loxodonta_africana
ENSLACG00000002986	-	73	59.204	ENSMFAG00000034235	SKIV2L	71	60.432	Macaca_fascicularis
ENSLACG00000002986	-	73	59.446	ENSMMUG00000000736	SKIV2L	71	60.192	Macaca_mulatta
ENSLACG00000002986	-	73	59.698	ENSMNEG00000044474	SKIV2L	71	60.432	Macaca_nemestrina
ENSLACG00000002986	-	73	59.950	ENSMLEG00000030512	SKIV2L	71	60.732	Mandrillus_leucophaeus
ENSLACG00000002986	-	60	62.585	ENSMAMG00000002927	skiv2l	52	75.974	Mastacembelus_armatus
ENSLACG00000002986	-	60	64.041	ENSMZEG00005026415	skiv2l	56	64.041	Maylandia_zebra
ENSLACG00000002986	-	73	59.698	ENSMAUG00000018613	Skiv2l	71	58.993	Mesocricetus_auratus
ENSLACG00000002986	-	73	59.548	ENSMICG00000046331	SKIV2L	71	59.472	Microcebus_murinus
ENSLACG00000002986	-	59	59.698	ENSMOCG00000014240	Skiv2l	57	58.753	Microtus_ochrogaster
ENSLACG00000002986	-	60	61.565	ENSMMOG00000014547	skiv2l	54	61.565	Mola_mola
ENSLACG00000002986	-	75	59.135	ENSMODG00000015052	SKIV2L	71	60.671	Monodelphis_domestica
ENSLACG00000002986	-	60	61.905	ENSMALG00000010535	skiv2l	55	61.905	Monopterus_albus
ENSLACG00000002986	-	73	61.713	MGP_CAROLIEiJ_G0021477	Skiv2l	71	60.192	Mus_caroli
ENSLACG00000002986	-	73	61.307	ENSMUSG00000040356	Skiv2l	71	60.192	Mus_musculus
ENSLACG00000002986	-	73	60.553	MGP_PahariEiJ_G0020472	Skiv2l	71	59.952	Mus_pahari
ENSLACG00000002986	-	73	61.307	MGP_SPRETEiJ_G0022382	Skiv2l	71	60.192	Mus_spretus
ENSLACG00000002986	-	73	58.081	ENSMPUG00000010567	SKIV2L	71	59.712	Mustela_putorius_furo
ENSLACG00000002986	-	73	60.453	ENSMLUG00000000628	SKIV2L	71	60.671	Myotis_lucifugus
ENSLACG00000002986	-	60	61.301	ENSNBRG00000018650	skiv2l	55	61.301	Neolamprologus_brichardi
ENSLACG00000002986	-	61	60.202	ENSNLEG00000006451	SKIV2L	60	60.244	Nomascus_leucogenys
ENSLACG00000002986	-	73	58.438	ENSOPRG00000003972	SKIV2L	71	58.753	Ochotona_princeps
ENSLACG00000002986	-	73	59.296	ENSODEG00000017516	SKIV2L	71	59.472	Octodon_degus
ENSLACG00000002986	-	60	64.726	ENSONIG00000013500	skiv2l	56	64.726	Oreochromis_niloticus
ENSLACG00000002986	-	73	60.804	ENSOCUG00000007019	SKIV2L	71	61.391	Oryctolagus_cuniculus
ENSLACG00000002986	-	60	62.925	ENSORLG00000002021	skiv2l	57	62.925	Oryzias_latipes
ENSLACG00000002986	-	60	62.925	ENSORLG00020009462	skiv2l	53	84.328	Oryzias_latipes_hni
ENSLACG00000002986	-	60	62.585	ENSORLG00015016750	skiv2l	51	84.328	Oryzias_latipes_hsok
ENSLACG00000002986	-	60	62.585	ENSOMEG00000008531	skiv2l	56	62.585	Oryzias_melastigma
ENSLACG00000002986	-	73	59.799	ENSOGAG00000009578	SKIV2L	71	59.952	Otolemur_garnettii
ENSLACG00000002986	-	73	57.389	ENSOARG00000002411	-	69	57.981	Ovis_aries
ENSLACG00000002986	-	73	60.202	ENSPPAG00000040211	SKIV2L	71	60.488	Pan_paniscus
ENSLACG00000002986	-	73	59.950	ENSPPRG00000005017	SKIV2L	71	60.192	Panthera_pardus
ENSLACG00000002986	-	73	59.701	ENSPTIG00000021656	SKIV2L	71	59.953	Panthera_tigris_altaica
ENSLACG00000002986	-	73	60.202	ENSPTRG00000017997	SKIV2L	71	60.432	Pan_troglodytes
ENSLACG00000002986	-	73	58.809	ENSPANG00000011501	SKIV2L	71	59.615	Papio_anubis
ENSLACG00000002986	-	60	60.544	ENSPKIG00000011876	skiv2l	57	60.544	Paramormyrops_kingsleyae
ENSLACG00000002986	-	60	61.905	ENSPMGG00000019707	skiv2l	54	61.905	Periophthalmus_magnuspinnatus
ENSLACG00000002986	-	59	59.446	ENSPEMG00000019001	Skiv2l	71	59.102	Peromyscus_maniculatus_bairdii
ENSLACG00000002986	-	75	61.151	ENSPCIG00000018792	SKIV2L	71	61.151	Phascolarctos_cinereus
ENSLACG00000002986	-	60	63.946	ENSPFOG00000002424	skiv2l	56	63.946	Poecilia_formosa
ENSLACG00000002986	-	60	63.946	ENSPLAG00000018304	skiv2l	56	63.946	Poecilia_latipinna
ENSLACG00000002986	-	60	63.946	ENSPMEG00000006997	skiv2l	56	63.946	Poecilia_mexicana
ENSLACG00000002986	-	60	61.905	ENSPREG00000002277	skiv2l	51	86.400	Poecilia_reticulata
ENSLACG00000002986	-	73	60.705	ENSPPYG00000016472	SKIV2L	71	60.911	Pongo_abelii
ENSLACG00000002986	-	73	59.799	ENSPCOG00000010308	SKIV2L	71	60.192	Propithecus_coquereli
ENSLACG00000002986	-	73	61.055	ENSPVAG00000005136	SKIV2L	71	60.766	Pteropus_vampyrus
ENSLACG00000002986	-	60	60.410	ENSPNYG00000017853	skiv2l	53	78.014	Pundamilia_nyererei
ENSLACG00000002986	-	59	61.905	ENSPNAG00000011823	skiv2l	56	61.905	Pygocentrus_nattereri
ENSLACG00000002986	-	73	61.153	ENSRNOG00000000421	Skiv2l	71	60.287	Rattus_norvegicus
ENSLACG00000002986	-	73	59.950	ENSRBIG00000035485	SKIV2L	70	60.732	Rhinopithecus_bieti
ENSLACG00000002986	-	73	59.453	ENSRROG00000036429	SKIV2L	71	60.671	Rhinopithecus_roxellana
ENSLACG00000002986	-	73	60.202	ENSSBOG00000027920	SKIV2L	72	60.244	Saimiri_boliviensis_boliviensis
ENSLACG00000002986	-	75	56.770	ENSSHAG00000008963	SKIV2L	68	59.233	Sarcophilus_harrisii
ENSLACG00000002986	-	60	62.585	ENSSFOG00015016930	skiv2l	56	62.585	Scleropages_formosus
ENSLACG00000002986	-	60	63.265	ENSSMAG00000020185	skiv2l	57	63.265	Scophthalmus_maximus
ENSLACG00000002986	-	60	62.245	ENSSDUG00000019977	skiv2l	56	62.245	Seriola_dumerili
ENSLACG00000002986	-	60	59.864	ENSSLDG00000024382	skiv2l	54	59.864	Seriola_lalandi_dorsalis
ENSLACG00000002986	-	55	69.014	ENSSPUG00000012945	SKIV2L	50	69.484	Sphenodon_punctatus
ENSLACG00000002986	-	54	60.526	ENSSPAG00000012904	skiv2l	53	60.526	Stegastes_partitus
ENSLACG00000002986	-	75	60.432	ENSSSCG00000001424	SKIV2L	71	60.671	Sus_scrofa
ENSLACG00000002986	-	60	58.844	ENSTNIG00000004382	skiv2l	56	58.844	Tetraodon_nigroviridis
ENSLACG00000002986	-	65	55.524	ENSTBEG00000003462	SKIV2L	63	55.108	Tupaia_belangeri
ENSLACG00000002986	-	66	60.202	ENSTTRG00000005931	SKIV2L	66	59.952	Tursiops_truncatus
ENSLACG00000002986	-	73	59.446	ENSUAMG00000024336	SKIV2L	71	60.192	Ursus_americanus
ENSLACG00000002986	-	67	62.346	ENSUMAG00000012666	SKIV2L	68	62.963	Ursus_maritimus
ENSLACG00000002986	-	73	59.194	ENSVVUG00000022807	SKIV2L	70	60.488	Vulpes_vulpes
ENSLACG00000002986	-	63	57.245	ENSXETG00000010932	skiv2l	59	57.186	Xenopus_tropicalis
ENSLACG00000002986	-	60	63.605	ENSXCOG00000019517	skiv2l	54	63.605	Xiphophorus_couchianus
ENSLACG00000002986	-	60	63.605	ENSXMAG00000014079	skiv2l	56	63.605	Xiphophorus_maculatus