EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000003160 (Gene tree)
Gene ID: 102366070
Gene Symbol: CLP1
Alias: HEAB|hClp1
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 3085 bases
Position: chrJH130223.1:72062-75146
Accession: 102366070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000003547	Clp1	PF06807.14	5.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000003579	CLP1-201	1794	XM_006012924	ENSLACP00000003547	424 (aa)	XP_006012986	H3A1M6

Gene Model

Click here to download ENSLACG00000003160's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003160	CLP1	100	85.647	ENSG00000172409	CLP1	100	85.647	Homo_sapiens
ENSLACG00000003160	CLP1	98	75.236	ENSAPOG00000008242	clp1	96	75.236	Acanthochromis_polyacanthus
ENSLACG00000003160	CLP1	100	85.412	ENSAMEG00000014551	CLP1	98	85.412	Ailuropoda_melanoleuca
ENSLACG00000003160	CLP1	99	74.178	ENSACIG00000006310	clp1	96	74.178	Amphilophus_citrinellus
ENSLACG00000003160	CLP1	99	74.707	ENSAOCG00000010681	clp1	99	74.707	Amphiprion_ocellaris
ENSLACG00000003160	CLP1	98	75.236	ENSAPEG00000012165	clp1	99	75.236	Amphiprion_percula
ENSLACG00000003160	CLP1	99	75.352	ENSATEG00000012374	clp1	97	75.352	Anabas_testudineus
ENSLACG00000003160	CLP1	100	87.059	ENSACAG00000007139	CLP1	100	87.059	Anolis_carolinensis
ENSLACG00000003160	CLP1	100	85.647	ENSANAG00000034935	CLP1	100	85.647	Aotus_nancymaae
ENSLACG00000003160	CLP1	98	75.000	ENSACLG00000013573	clp1	96	75.000	Astatotilapia_calliptera
ENSLACG00000003160	CLP1	98	76.777	ENSAMXG00000014194	clp1	98	76.777	Astyanax_mexicanus
ENSLACG00000003160	CLP1	100	85.412	ENSBTAG00000006493	CLP1	100	85.412	Bos_taurus
ENSLACG00000003160	CLP1	98	47.754	WBGene00010304	clpf-1	99	47.754	Caenorhabditis_elegans
ENSLACG00000003160	CLP1	100	85.647	ENSCJAG00000008748	CLP1	100	85.647	Callithrix_jacchus
ENSLACG00000003160	CLP1	100	85.412	ENSCAFG00000007815	CLP1	100	85.412	Canis_familiaris
ENSLACG00000003160	CLP1	100	85.412	ENSCAFG00020000903	CLP1	100	85.412	Canis_lupus_dingo
ENSLACG00000003160	CLP1	100	85.176	ENSCHIG00000023497	CLP1	100	85.176	Capra_hircus
ENSLACG00000003160	CLP1	100	85.647	ENSTSYG00000006824	CLP1	99	85.647	Carlito_syrichta
ENSLACG00000003160	CLP1	100	85.849	ENSCAPG00000009703	CLP1	100	85.849	Cavia_aperea
ENSLACG00000003160	CLP1	98	86.538	ENSCPOG00000012554	CLP1	99	86.538	Cavia_porcellus
ENSLACG00000003160	CLP1	100	85.412	ENSCCAG00000031957	CLP1	100	85.412	Cebus_capucinus
ENSLACG00000003160	CLP1	100	85.647	ENSCATG00000044628	CLP1	100	85.647	Cercocebus_atys
ENSLACG00000003160	CLP1	100	85.647	ENSCLAG00000004094	CLP1	100	85.647	Chinchilla_lanigera
ENSLACG00000003160	CLP1	100	85.647	ENSCSAG00000005994	CLP1	100	85.647	Chlorocebus_sabaeus
ENSLACG00000003160	CLP1	100	87.294	ENSCPBG00000016843	CLP1	100	87.294	Chrysemys_picta_bellii
ENSLACG00000003160	CLP1	97	63.260	ENSCING00000003779	-	96	63.260	Ciona_intestinalis
ENSLACG00000003160	CLP1	97	64.634	ENSCSAVG00000003437	-	96	64.634	Ciona_savignyi
ENSLACG00000003160	CLP1	100	85.647	ENSCANG00000034335	CLP1	100	85.647	Colobus_angolensis_palliatus
ENSLACG00000003160	CLP1	100	85.176	ENSCGRG00001002227	CLP1	100	85.176	Cricetulus_griseus_chok1gshd
ENSLACG00000003160	CLP1	100	85.176	ENSCGRG00000004328	CLP1	100	85.176	Cricetulus_griseus_crigri
ENSLACG00000003160	CLP1	99	74.883	ENSCSEG00000008614	clp1	97	74.883	Cynoglossus_semilaevis
ENSLACG00000003160	CLP1	99	75.822	ENSCVAG00000020101	clp1	97	75.822	Cyprinodon_variegatus
ENSLACG00000003160	CLP1	97	78.043	ENSDARG00000063663	clp1	95	78.043	Danio_rerio
ENSLACG00000003160	CLP1	99	85.142	ENSDNOG00000042415	CLP1	90	85.142	Dasypus_novemcinctus
ENSLACG00000003160	CLP1	100	85.412	ENSDORG00000014685	Clp1	100	85.412	Dipodomys_ordii
ENSLACG00000003160	CLP1	98	57.041	FBgn0033842	cbc	99	57.041	Drosophila_melanogaster
ENSLACG00000003160	CLP1	100	85.647	ENSETEG00000003009	CLP1	100	85.647	Echinops_telfairi
ENSLACG00000003160	CLP1	100	71.059	ENSEBUG00000011648	clp1	100	71.059	Eptatretus_burgeri
ENSLACG00000003160	CLP1	100	85.647	ENSEASG00005002093	CLP1	100	85.647	Equus_asinus_asinus
ENSLACG00000003160	CLP1	100	85.647	ENSECAG00000011597	CLP1	100	85.647	Equus_caballus
ENSLACG00000003160	CLP1	100	85.412	ENSEEUG00000012771	CLP1	100	85.412	Erinaceus_europaeus
ENSLACG00000003160	CLP1	97	78.860	ENSELUG00000024048	clp1	95	78.860	Esox_lucius
ENSLACG00000003160	CLP1	100	85.412	ENSFCAG00000006633	CLP1	100	85.412	Felis_catus
ENSLACG00000003160	CLP1	100	86.588	ENSFALG00000011145	CLP1	100	86.588	Ficedula_albicollis
ENSLACG00000003160	CLP1	100	85.647	ENSFDAG00000000234	CLP1	100	85.647	Fukomys_damarensis
ENSLACG00000003160	CLP1	99	74.651	ENSFHEG00000014760	CLP1	98	74.651	Fundulus_heteroclitus
ENSLACG00000003160	CLP1	97	79.665	ENSGMOG00000019340	clp1	95	79.665	Gadus_morhua
ENSLACG00000003160	CLP1	100	86.353	ENSGALG00000007370	CLP1	100	86.353	Gallus_gallus
ENSLACG00000003160	CLP1	99	74.651	ENSGAFG00000003020	clp1	99	74.651	Gambusia_affinis
ENSLACG00000003160	CLP1	98	75.472	ENSGACG00000017832	clp1	96	75.472	Gasterosteus_aculeatus
ENSLACG00000003160	CLP1	100	87.529	ENSGAGG00000013279	CLP1	100	87.529	Gopherus_agassizii
ENSLACG00000003160	CLP1	100	85.647	ENSGGOG00000023006	CLP1	100	85.647	Gorilla_gorilla
ENSLACG00000003160	CLP1	98	74.764	ENSHBUG00000010436	clp1	96	74.764	Haplochromis_burtoni
ENSLACG00000003160	CLP1	100	85.647	ENSHGLG00000009914	CLP1	100	85.647	Heterocephalus_glaber_female
ENSLACG00000003160	CLP1	100	85.647	ENSHGLG00100006105	CLP1	100	85.647	Heterocephalus_glaber_male
ENSLACG00000003160	CLP1	98	76.415	ENSHCOG00000010072	clp1	96	76.415	Hippocampus_comes
ENSLACG00000003160	CLP1	97	78.810	ENSIPUG00000016238	clp1	94	78.622	Ictalurus_punctatus
ENSLACG00000003160	CLP1	100	85.412	ENSSTOG00000029257	CLP1	100	85.412	Ictidomys_tridecemlineatus
ENSLACG00000003160	CLP1	100	85.412	ENSJJAG00000023691	Clp1	100	85.412	Jaculus_jaculus
ENSLACG00000003160	CLP1	99	75.116	ENSKMAG00000011990	clp1	98	75.116	Kryptolebias_marmoratus
ENSLACG00000003160	CLP1	98	76.651	ENSLBEG00000010201	clp1	96	76.651	Labrus_bergylta
ENSLACG00000003160	CLP1	73	77.019	ENSLOCG00000008074	clp1	100	77.019	Lepisosteus_oculatus
ENSLACG00000003160	CLP1	100	85.882	ENSLAFG00000014907	CLP1	100	85.882	Loxodonta_africana
ENSLACG00000003160	CLP1	100	85.647	ENSMFAG00000046074	CLP1	100	85.647	Macaca_fascicularis
ENSLACG00000003160	CLP1	100	85.647	ENSMMUG00000038007	CLP1	99	85.647	Macaca_mulatta
ENSLACG00000003160	CLP1	100	85.647	ENSMNEG00000000259	CLP1	100	85.647	Macaca_nemestrina
ENSLACG00000003160	CLP1	100	85.647	ENSMLEG00000043556	CLP1	100	85.647	Mandrillus_leucophaeus
ENSLACG00000003160	CLP1	99	75.117	ENSMAMG00000002149	clp1	97	75.117	Mastacembelus_armatus
ENSLACG00000003160	CLP1	98	75.000	ENSMZEG00005002850	clp1	96	75.000	Maylandia_zebra
ENSLACG00000003160	CLP1	100	86.353	ENSMGAG00000009643	CLP1	100	86.353	Meleagris_gallopavo
ENSLACG00000003160	CLP1	100	85.176	ENSMAUG00000016261	Clp1	100	85.176	Mesocricetus_auratus
ENSLACG00000003160	CLP1	100	85.412	ENSMICG00000004895	CLP1	100	85.412	Microcebus_murinus
ENSLACG00000003160	CLP1	100	85.412	ENSMOCG00000005498	Clp1	100	85.412	Microtus_ochrogaster
ENSLACG00000003160	CLP1	98	76.651	ENSMMOG00000003229	clp1	96	76.651	Mola_mola
ENSLACG00000003160	CLP1	100	85.647	ENSMODG00000024148	-	100	85.647	Monodelphis_domestica
ENSLACG00000003160	CLP1	100	85.647	ENSMODG00000020107	-	100	85.647	Monodelphis_domestica
ENSLACG00000003160	CLP1	98	75.000	ENSMALG00000014239	clp1	96	75.000	Monopterus_albus
ENSLACG00000003160	CLP1	100	85.176	MGP_CAROLIEiJ_G0023726	Clp1	100	85.176	Mus_caroli
ENSLACG00000003160	CLP1	100	85.176	ENSMUSG00000027079	Clp1	100	85.176	Mus_musculus
ENSLACG00000003160	CLP1	100	85.176	MGP_PahariEiJ_G0025177	Clp1	100	85.176	Mus_pahari
ENSLACG00000003160	CLP1	100	85.176	MGP_SPRETEiJ_G0024646	Clp1	100	85.176	Mus_spretus
ENSLACG00000003160	CLP1	100	85.412	ENSMPUG00000000268	CLP1	100	85.412	Mustela_putorius_furo
ENSLACG00000003160	CLP1	100	85.882	ENSMLUG00000007904	CLP1	100	85.882	Myotis_lucifugus
ENSLACG00000003160	CLP1	100	85.176	ENSNGAG00000006165	Clp1	100	85.176	Nannospalax_galili
ENSLACG00000003160	CLP1	98	75.000	ENSNBRG00000005225	clp1	96	75.000	Neolamprologus_brichardi
ENSLACG00000003160	CLP1	81	82.400	ENSNLEG00000012809	-	100	82.400	Nomascus_leucogenys
ENSLACG00000003160	CLP1	100	85.412	ENSMEUG00000010949	CLP1	99	85.412	Notamacropus_eugenii
ENSLACG00000003160	CLP1	70	88.255	ENSOPRG00000007329	CLP1	100	88.255	Ochotona_princeps
ENSLACG00000003160	CLP1	100	85.647	ENSODEG00000011410	CLP1	100	85.647	Octodon_degus
ENSLACG00000003160	CLP1	98	74.764	ENSONIG00000005089	clp1	96	74.764	Oreochromis_niloticus
ENSLACG00000003160	CLP1	100	85.412	ENSOCUG00000007045	CLP1	100	85.412	Oryctolagus_cuniculus
ENSLACG00000003160	CLP1	98	75.236	ENSORLG00000003647	clp1	96	75.236	Oryzias_latipes
ENSLACG00000003160	CLP1	98	75.000	ENSORLG00020016676	clp1	96	75.000	Oryzias_latipes_hni
ENSLACG00000003160	CLP1	98	75.236	ENSORLG00015019484	clp1	96	75.236	Oryzias_latipes_hsok
ENSLACG00000003160	CLP1	98	75.236	ENSOMEG00000021303	clp1	96	75.236	Oryzias_melastigma
ENSLACG00000003160	CLP1	100	85.412	ENSOGAG00000004508	CLP1	100	85.412	Otolemur_garnettii
ENSLACG00000003160	CLP1	100	84.000	ENSOARG00000010145	CLP1	98	84.000	Ovis_aries
ENSLACG00000003160	CLP1	100	85.647	ENSPPAG00000041519	CLP1	100	85.647	Pan_paniscus
ENSLACG00000003160	CLP1	100	85.412	ENSPPRG00000006135	CLP1	100	85.412	Panthera_pardus
ENSLACG00000003160	CLP1	100	85.412	ENSPTIG00000015866	CLP1	100	85.412	Panthera_tigris_altaica
ENSLACG00000003160	CLP1	100	85.647	ENSPTRG00000047318	CLP1	100	85.647	Pan_troglodytes
ENSLACG00000003160	CLP1	100	85.647	ENSPANG00000017078	CLP1	97	85.647	Papio_anubis
ENSLACG00000003160	CLP1	97	80.387	ENSPKIG00000007697	clp1	94	80.387	Paramormyrops_kingsleyae
ENSLACG00000003160	CLP1	95	83.831	ENSPSIG00000005468	CLP1	100	83.831	Pelodiscus_sinensis
ENSLACG00000003160	CLP1	99	75.116	ENSPMGG00000012171	clp1	98	75.116	Periophthalmus_magnuspinnatus
ENSLACG00000003160	CLP1	100	85.412	ENSPEMG00000011213	-	100	85.412	Peromyscus_maniculatus_bairdii
ENSLACG00000003160	CLP1	99	74.408	ENSPMAG00000006707	clp1	99	74.408	Petromyzon_marinus
ENSLACG00000003160	CLP1	100	85.882	ENSPCIG00000011899	CLP1	99	85.882	Phascolarctos_cinereus
ENSLACG00000003160	CLP1	99	74.884	ENSPFOG00000008169	clp1	98	74.884	Poecilia_formosa
ENSLACG00000003160	CLP1	100	74.537	ENSPLAG00000022388	clp1	99	74.537	Poecilia_latipinna
ENSLACG00000003160	CLP1	100	74.537	ENSPMEG00000021088	clp1	99	74.537	Poecilia_mexicana
ENSLACG00000003160	CLP1	99	74.884	ENSPREG00000017802	clp1	98	74.884	Poecilia_reticulata
ENSLACG00000003160	CLP1	53	87.946	ENSPPYG00000003266	-	100	87.946	Pongo_abelii
ENSLACG00000003160	CLP1	100	85.412	ENSPCOG00000000360	CLP1	98	85.412	Propithecus_coquereli
ENSLACG00000003160	CLP1	100	85.412	ENSPVAG00000016270	CLP1	100	85.412	Pteropus_vampyrus
ENSLACG00000003160	CLP1	98	74.764	ENSPNYG00000017274	clp1	95	74.764	Pundamilia_nyererei
ENSLACG00000003160	CLP1	97	78.810	ENSPNAG00000026460	clp1	95	78.622	Pygocentrus_nattereri
ENSLACG00000003160	CLP1	100	85.176	ENSRNOG00000007416	Clp1	100	85.176	Rattus_norvegicus
ENSLACG00000003160	CLP1	100	85.647	ENSRBIG00000018191	CLP1	100	85.647	Rhinopithecus_bieti
ENSLACG00000003160	CLP1	100	85.647	ENSRROG00000039265	CLP1	100	85.647	Rhinopithecus_roxellana
ENSLACG00000003160	CLP1	100	85.647	ENSSBOG00000032517	-	100	85.647	Saimiri_boliviensis_boliviensis
ENSLACG00000003160	CLP1	96	69.704	ENSSBOG00000010558	-	93	69.704	Saimiri_boliviensis_boliviensis
ENSLACG00000003160	CLP1	100	85.647	ENSSHAG00000015695	CLP1	100	85.647	Sarcophilus_harrisii
ENSLACG00000003160	CLP1	97	79.059	ENSSFOG00015000628	clp1	96	79.059	Scleropages_formosus
ENSLACG00000003160	CLP1	97	75.952	ENSSMAG00000019423	clp1	94	75.952	Scophthalmus_maximus
ENSLACG00000003160	CLP1	99	75.587	ENSSDUG00000014495	clp1	97	75.587	Seriola_dumerili
ENSLACG00000003160	CLP1	99	75.352	ENSSLDG00000000937	clp1	97	75.352	Seriola_lalandi_dorsalis
ENSLACG00000003160	CLP1	53	88.789	ENSSARG00000002459	CLP1	100	88.789	Sorex_araneus
ENSLACG00000003160	CLP1	100	86.824	ENSSPUG00000016811	CLP1	100	86.824	Sphenodon_punctatus
ENSLACG00000003160	CLP1	98	75.000	ENSSPAG00000016052	clp1	96	75.000	Stegastes_partitus
ENSLACG00000003160	CLP1	100	85.412	ENSSSCG00000031442	CLP1	100	85.412	Sus_scrofa
ENSLACG00000003160	CLP1	100	86.588	ENSTGUG00000007002	CLP1	100	86.588	Taeniopygia_guttata
ENSLACG00000003160	CLP1	98	76.190	ENSTRUG00000012602	clp1	96	76.190	Takifugu_rubripes
ENSLACG00000003160	CLP1	98	75.714	ENSTNIG00000013125	clp1	96	75.714	Tetraodon_nigroviridis
ENSLACG00000003160	CLP1	100	84.941	ENSTBEG00000009975	CLP1	100	84.941	Tupaia_belangeri
ENSLACG00000003160	CLP1	100	84.941	ENSTTRG00000002096	CLP1	100	84.941	Tursiops_truncatus
ENSLACG00000003160	CLP1	100	85.412	ENSUAMG00000011388	CLP1	100	85.412	Ursus_americanus
ENSLACG00000003160	CLP1	100	85.412	ENSUMAG00000018317	CLP1	100	85.412	Ursus_maritimus
ENSLACG00000003160	CLP1	100	85.412	ENSVVUG00000017138	CLP1	97	85.412	Vulpes_vulpes
ENSLACG00000003160	CLP1	98	75.481	ENSXETG00000007088	clp1	95	76.442	Xenopus_tropicalis
ENSLACG00000003160	CLP1	99	74.884	ENSXCOG00000002287	clp1	98	74.884	Xiphophorus_couchianus
ENSLACG00000003160	CLP1	99	74.884	ENSXMAG00000009783	clp1	98	74.884	Xiphophorus_maculatus