EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLACG00000003258 (Gene tree)
Gene ID
102352673
Gene Symbol
SPEN
Alias
KIAA0929|MINT|RBM15C|SHARP
Full Name
spen family transcriptional repressor
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Plus strand
Length
88332 bases
Position
chrJH126865.1:75817-164148
Accession
102352673
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000003658RRM_5PF13893.63.5e-0812
ENSLACP00000003658RRM_5PF13893.63.5e-0822
ENSLACP00000003659RRM_5PF13893.66e-0812
ENSLACP00000003659RRM_5PF13893.66e-0822
ENSLACP00000003657RRM_5PF13893.66.3e-0812
ENSLACP00000003657RRM_5PF13893.66.3e-0822
ENSLACP00000003658RRM_1PF00076.222.1e-4414
ENSLACP00000003658RRM_1PF00076.222.1e-4424
ENSLACP00000003658RRM_1PF00076.222.1e-4434
ENSLACP00000003658RRM_1PF00076.222.1e-4444
ENSLACP00000003659RRM_1PF00076.223.9e-4414
ENSLACP00000003659RRM_1PF00076.223.9e-4424
ENSLACP00000003659RRM_1PF00076.223.9e-4434
ENSLACP00000003659RRM_1PF00076.223.9e-4444
ENSLACP00000003657RRM_1PF00076.224e-4414
ENSLACP00000003657RRM_1PF00076.224e-4424
ENSLACP00000003657RRM_1PF00076.224e-4434
ENSLACP00000003657RRM_1PF00076.224e-4444
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000003692SPEN-20211264XM_005996282ENSLACP000000036593586 (aa)XP_005996344H3A1Y8
ENSLACT00000003690SPEN-20111339-ENSLACP000000036573610 (aa)-H3A1Y6
ENSLACT00000003691SPEN-2039917-ENSLACP000000036583136 (aa)-H3A1Y7
Gene Model
Click here to download ENSLACG00000003258's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003258's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000003258SPEN9963.264ENSG00000065526SPEN8594.422Homo_sapiens
ENSLACG00000003258SPEN9682.022ENSAPOG00000009853-8974.809Acanthochromis_polyacanthus
ENSLACG00000003258SPEN8984.211ENSAPOG00000011411si:ch1073-335m2.29384.211Acanthochromis_polyacanthus
ENSLACG00000003258SPEN9096.273ENSAMEG00000011817SPEN8396.273Ailuropoda_melanoleuca
ENSLACG00000003258SPEN9682.022ENSAOCG00000014505-7184.568Amphiprion_ocellaris
ENSLACG00000003258SPEN8778.519ENSAOCG00000008077si:ch1073-335m2.29978.519Amphiprion_ocellaris
ENSLACG00000003258SPEN9382.022ENSAPEG00000010288-7184.568Amphiprion_percula
ENSLACG00000003258SPEN9678.519ENSAPEG00000013515si:ch1073-335m2.29455.681Amphiprion_percula
ENSLACG00000003258SPEN9174.129ENSATEG00000007674si:ch1073-335m2.29480.556Anabas_testudineus
ENSLACG00000003258SPEN7785.185ENSATEG00000005627-7285.185Anabas_testudineus
ENSLACG00000003258SPEN9980.000ENSAPLG00000012618SPEN9780.000Anas_platyrhynchos
ENSLACG00000003258SPEN7196.914ENSACAG00000013761SPEN9696.914Anolis_carolinensis
ENSLACG00000003258SPEN9962.779ENSANAG00000034428SPEN9662.917Aotus_nancymaae
ENSLACG00000003258SPEN6983.626ENSACLG00000021433si:ch1073-335m2.27583.626Astatotilapia_calliptera
ENSLACG00000003258SPEN7685.185ENSACLG00000016922-7185.185Astatotilapia_calliptera
ENSLACG00000003258SPEN9481.564ENSAMXG00000012485spen9980.435Astyanax_mexicanus
ENSLACG00000003258SPEN9981.863ENSBTAG00000018729SPEN9481.863Bos_taurus
ENSLACG00000003258SPEN8995.679ENSCJAG00000008527SPEN8381.863Callithrix_jacchus
ENSLACG00000003258SPEN8673.012ENSCAFG00000016132-9273.368Canis_familiaris
ENSLACG00000003258SPEN9963.166ENSCHIG00000025070SPEN9763.141Capra_hircus
ENSLACG00000003258SPEN9078.922ENSTSYG00000036016SPEN9278.922Carlito_syrichta
ENSLACG00000003258SPEN9795.652ENSCAPG00000013803SPEN9595.652Cavia_aperea
ENSLACG00000003258SPEN7295.652ENSCPOG00000014036SPEN9595.652Cavia_porcellus
ENSLACG00000003258SPEN9081.863ENSCCAG00000020258SPEN9757.489Cebus_capucinus
ENSLACG00000003258SPEN9598.519ENSCATG00000015079SPEN9697.794Cercocebus_atys
ENSLACG00000003258SPEN9895.652ENSCLAG00000002018SPEN9595.652Chinchilla_lanigera
ENSLACG00000003258SPEN9081.863ENSCSAG00000000841SPEN8381.863Chlorocebus_sabaeus
ENSLACG00000003258SPEN9996.914ENSCPBG00000010477SPEN9696.914Chrysemys_picta_bellii
ENSLACG00000003258SPEN9181.863ENSCANG00000034547SPEN9381.863Colobus_angolensis_palliatus
ENSLACG00000003258SPEN9959.993ENSCGRG00001007725Spen9760.213Cricetulus_griseus_chok1gshd
ENSLACG00000003258SPEN9958.978ENSCGRG00000010581Spen9758.978Cricetulus_griseus_crigri
ENSLACG00000003258SPEN8283.708ENSCSEG00000003915-7385.802Cynoglossus_semilaevis
ENSLACG00000003258SPEN8984.211ENSCVAG00000009075si:ch1073-335m2.25035.899Cyprinodon_variegatus
ENSLACG00000003258SPEN10046.421ENSCVAG00000016346-10046.965Cyprinodon_variegatus
ENSLACG00000003258SPEN10048.331ENSDARG00000074245spen10088.148Danio_rerio
ENSLACG00000003258SPEN8680.460ENSDARG00000074332si:ch1073-335m2.29180.460Danio_rerio
ENSLACG00000003258SPEN9981.863ENSDNOG00000041948SPEN9381.863Dasypus_novemcinctus
ENSLACG00000003258SPEN9981.863ENSDORG00000023909Spen9681.863Dipodomys_ordii
ENSLACG00000003258SPEN5992.405ENSETEG00000016692-6692.340Echinops_telfairi
ENSLACG00000003258SPEN6171.910ENSEBUG00000007307-5967.920Eptatretus_burgeri
ENSLACG00000003258SPEN9598.519ENSEASG00005015911SPEN9698.519Equus_asinus_asinus
ENSLACG00000003258SPEN9598.519ENSECAG00000008833SPEN9698.519Equus_caballus
ENSLACG00000003258SPEN6895.349ENSEEUG00000010255SPEN7395.349Erinaceus_europaeus
ENSLACG00000003258SPEN7283.333ENSELUG00000007726si:ch1073-335m2.29783.333Esox_lucius
ENSLACG00000003258SPEN5997.531ENSFALG00000003551SPEN10067.183Ficedula_albicollis
ENSLACG00000003258SPEN9083.333ENSFDAG00000010212SPEN9383.333Fukomys_damarensis
ENSLACG00000003258SPEN8979.444ENSFHEG00000004544si:ch1073-335m2.29479.444Fundulus_heteroclitus
ENSLACG00000003258SPEN9984.472ENSGMOG00000008397-9784.472Gadus_morhua
ENSLACG00000003258SPEN9996.296ENSGALG00000036932SPEN9596.296Gallus_gallus
ENSLACG00000003258SPEN9985.093ENSGAFG00000015819-8976.046Gambusia_affinis
ENSLACG00000003258SPEN8884.024ENSGAFG00000021570si:ch1073-335m2.210043.909Gambusia_affinis
ENSLACG00000003258SPEN9580.588ENSGACG00000001176si:ch1073-335m2.29680.588Gasterosteus_aculeatus
ENSLACG00000003258SPEN9984.568ENSGACG00000005341-9684.568Gasterosteus_aculeatus
ENSLACG00000003258SPEN9995.108ENSGAGG00000020785SPEN9781.132Gopherus_agassizii
ENSLACG00000003258SPEN9081.373ENSGGOG00000012041SPEN8381.373Gorilla_gorilla
ENSLACG00000003258SPEN7383.626ENSHBUG00000023253si:ch1073-335m2.27483.626Haplochromis_burtoni
ENSLACG00000003258SPEN7685.185ENSHBUG00000020626-7185.185Haplochromis_burtoni
ENSLACG00000003258SPEN9995.652ENSHGLG00000019259SPEN9295.652Heterocephalus_glaber_female
ENSLACG00000003258SPEN8895.652ENSHGLG00100019294SPEN8795.652Heterocephalus_glaber_male
ENSLACG00000003258SPEN8768.098ENSHCOG00000006004si:ch1073-335m2.29581.250Hippocampus_comes
ENSLACG00000003258SPEN7782.222ENSIPUG00000021668spen9881.421Ictalurus_punctatus
ENSLACG00000003258SPEN7478.161ENSIPUG00000018212si:ch1073-335m2.29678.161Ictalurus_punctatus
ENSLACG00000003258SPEN9780.392ENSSTOG00000021428SPEN9380.392Ictidomys_tridecemlineatus
ENSLACG00000003258SPEN9980.905ENSJJAG00000010882Spen9780.905Jaculus_jaculus
ENSLACG00000003258SPEN6884.211ENSKMAG00000021725si:ch1073-335m2.27284.211Kryptolebias_marmoratus
ENSLACG00000003258SPEN9981.461ENSKMAG00000003882-9784.302Kryptolebias_marmoratus
ENSLACG00000003258SPEN8642.110ENSLBEG00000019129-9571.429Labrus_bergylta
ENSLACG00000003258SPEN9180.473ENSLBEG00000020855si:ch1073-335m2.25380.473Labrus_bergylta
ENSLACG00000003258SPEN10088.957ENSLOCG00000007896si:ch1073-335m2.29969.397Lepisosteus_oculatus
ENSLACG00000003258SPEN9081.773ENSLAFG00000004524SPEN8381.773Loxodonta_africana
ENSLACG00000003258SPEN9963.403ENSMFAG00000041974SPEN9763.543Macaca_fascicularis
ENSLACG00000003258SPEN9963.330ENSMMUG00000008026SPEN9763.470Macaca_mulatta
ENSLACG00000003258SPEN9963.563ENSMNEG00000042402SPEN9763.690Macaca_nemestrina
ENSLACG00000003258SPEN9181.863ENSMLEG00000039293SPEN8481.863Mandrillus_leucophaeus
ENSLACG00000003258SPEN8971.905ENSMAMG00000023870si:ch1073-335m2.27472.816Mastacembelus_armatus
ENSLACG00000003258SPEN6585.185ENSMZEG00005021491-6785.185Maylandia_zebra
ENSLACG00000003258SPEN6983.626ENSMZEG00005011762si:ch1073-335m2.27483.626Maylandia_zebra
ENSLACG00000003258SPEN9970.270ENSMAUG00000008318Spen9570.270Mesocricetus_auratus
ENSLACG00000003258SPEN9880.882ENSMICG00000030994SPEN9080.882Microcebus_murinus
ENSLACG00000003258SPEN8196.273ENSMOCG00000016083Spen6696.273Microtus_ochrogaster
ENSLACG00000003258SPEN9283.626ENSMMOG00000021742si:ch1073-335m2.27483.626Mola_mola
ENSLACG00000003258SPEN9991.925ENSMODG00000003411SPEN9591.925Monodelphis_domestica
ENSLACG00000003258SPEN9981.461ENSMALG00000008625-7484.568Monopterus_albus
ENSLACG00000003258SPEN8864.090MGP_CAROLIEiJ_G0026745Spen9759.450Mus_caroli
ENSLACG00000003258SPEN8962.252ENSMUSG00000040761Spen8562.252Mus_musculus
ENSLACG00000003258SPEN8896.273MGP_PahariEiJ_G0029076Spen8296.273Mus_pahari
ENSLACG00000003258SPEN9662.252MGP_SPRETEiJ_G0027724Spen9362.252Mus_spretus
ENSLACG00000003258SPEN6896.273ENSMPUG00000016317SPEN9096.273Mustela_putorius_furo
ENSLACG00000003258SPEN9193.548ENSMLUG00000010144SPEN9992.453Myotis_lucifugus
ENSLACG00000003258SPEN10062.376ENSNGAG00000000641Spen9966.001Nannospalax_galili
ENSLACG00000003258SPEN7656.956ENSNBRG00000005733si:ch1073-335m2.29483.626Neolamprologus_brichardi
ENSLACG00000003258SPEN6085.185ENSNBRG00000022090-6685.185Neolamprologus_brichardi
ENSLACG00000003258SPEN9963.226ENSNLEG00000007652SPEN9663.369Nomascus_leucogenys
ENSLACG00000003258SPEN9090.625ENSMEUG00000002422SPEN9190.625Notamacropus_eugenii
ENSLACG00000003258SPEN9080.882ENSOPRG00000015800SPEN8878.525Ochotona_princeps
ENSLACG00000003258SPEN10079.412ENSODEG00000016644SPEN9879.412Octodon_degus
ENSLACG00000003258SPEN7685.185ENSONIG00000006573-9983.122Oreochromis_niloticus
ENSLACG00000003258SPEN7380.392ENSOCUG00000010840SPEN7880.392Oryctolagus_cuniculus
ENSLACG00000003258SPEN8683.721ENSORLG00000028894-9983.721Oryzias_latipes
ENSLACG00000003258SPEN5983.041ENSORLG00000018414si:ch1073-335m2.28783.041Oryzias_latipes
ENSLACG00000003258SPEN8683.721ENSORLG00020007735-9983.721Oryzias_latipes_hni
ENSLACG00000003258SPEN7883.041ENSORLG00020009351si:ch1073-335m2.25383.041Oryzias_latipes_hni
ENSLACG00000003258SPEN9783.721ENSORLG00015022085-9983.721Oryzias_latipes_hsok
ENSLACG00000003258SPEN8476.536ENSORLG00015005537si:ch1073-335m2.28782.456Oryzias_latipes_hsok
ENSLACG00000003258SPEN9783.721ENSOMEG00000007639-7283.721Oryzias_melastigma
ENSLACG00000003258SPEN10044.984ENSOMEG00000004509si:ch1073-335m2.25383.041Oryzias_melastigma
ENSLACG00000003258SPEN9996.273ENSOGAG00000025110SPEN9380.788Otolemur_garnettii
ENSLACG00000003258SPEN9181.373ENSOARG00000008477SPEN8481.373Ovis_aries
ENSLACG00000003258SPEN9962.847ENSPPAG00000035690SPEN9763.011Pan_paniscus
ENSLACG00000003258SPEN9963.387ENSPTRG00000000210SPEN9763.696Pan_troglodytes
ENSLACG00000003258SPEN9081.863ENSPANG00000006293SPEN8381.863Papio_anubis
ENSLACG00000003258SPEN9988.889ENSPKIG00000002617SPEN9888.889Paramormyrops_kingsleyae
ENSLACG00000003258SPEN97100.000ENSPKIG00000010492si:ch1073-335m2.298100.000Paramormyrops_kingsleyae
ENSLACG00000003258SPEN7296.914ENSPSIG00000008026SPEN10068.623Pelodiscus_sinensis
ENSLACG00000003258SPEN8880.392ENSPEMG00000022997Spen9480.392Peromyscus_maniculatus_bairdii
ENSLACG00000003258SPEN8985.207ENSPFOG00000017986si:ch1073-335m2.210044.228Poecilia_formosa
ENSLACG00000003258SPEN8985.207ENSPLAG00000016625si:ch1073-335m2.210044.418Poecilia_latipinna
ENSLACG00000003258SPEN9984.472ENSPMEG00000006764-8975.665Poecilia_mexicana
ENSLACG00000003258SPEN8985.207ENSPMEG00000002674si:ch1073-335m2.210044.120Poecilia_mexicana
ENSLACG00000003258SPEN9984.472ENSPREG00000010399-8976.046Poecilia_reticulata
ENSLACG00000003258SPEN8985.207ENSPREG00000005357si:ch1073-335m2.29485.207Poecilia_reticulata
ENSLACG00000003258SPEN9963.566ENSPPYG00000001834SPEN9763.836Pongo_abelii
ENSLACG00000003258SPEN8694.410ENSPCAG00000009543SPEN8494.410Procavia_capensis
ENSLACG00000003258SPEN7394.969ENSPCOG00000021735SPEN6794.969Propithecus_coquereli
ENSLACG00000003258SPEN7794.410ENSPVAG00000013794SPEN7294.410Pteropus_vampyrus
ENSLACG00000003258SPEN7656.956ENSPNYG00000009042si:ch1073-335m2.25583.626Pundamilia_nyererei
ENSLACG00000003258SPEN7685.185ENSPNYG00000012379-7185.185Pundamilia_nyererei
ENSLACG00000003258SPEN9983.051ENSPNAG00000020795spen9881.868Pygocentrus_nattereri
ENSLACG00000003258SPEN9680.460ENSPNAG00000011452si:ch1073-335m2.26780.460Pygocentrus_nattereri
ENSLACG00000003258SPEN7296.273ENSRNOG00000033556Spen7796.273Rattus_norvegicus
ENSLACG00000003258SPEN9081.863ENSRBIG00000039654SPEN9381.863Rhinopithecus_bieti
ENSLACG00000003258SPEN8981.863ENSRROG00000035686SPEN9381.863Rhinopithecus_roxellana
ENSLACG00000003258SPEN9663.158ENSSBOG00000028770SPEN9363.751Saimiri_boliviensis_boliviensis
ENSLACG00000003258SPEN7193.168ENSSHAG00000004960SPEN9991.856Sarcophilus_harrisii
ENSLACG00000003258SPEN6291.925ENSSFOG00015007131si:ch1073-335m2.29665.741Scleropages_formosus
ENSLACG00000003258SPEN9791.228ENSSFOG00015010267si:ch1073-335m2.29883.333Scleropages_formosus
ENSLACG00000003258SPEN7283.626ENSSMAG00000000125si:ch1073-335m2.29374.627Scophthalmus_maximus
ENSLACG00000003258SPEN9382.584ENSSMAG00000008996-7085.802Scophthalmus_maximus
ENSLACG00000003258SPEN9983.146ENSSDUG00000003476-8974.436Seriola_dumerili
ENSLACG00000003258SPEN9084.211ENSSDUG00000008416si:ch1073-335m2.29484.211Seriola_dumerili
ENSLACG00000003258SPEN9983.146ENSSLDG00000012950-8974.436Seriola_lalandi_dorsalis
ENSLACG00000003258SPEN8684.211ENSSLDG00000023347si:ch1073-335m2.29184.211Seriola_lalandi_dorsalis
ENSLACG00000003258SPEN8996.296ENSSPUG00000001866-9696.914Sphenodon_punctatus
ENSLACG00000003258SPEN9784.211ENSSPAG00000012454si:ch1073-335m2.210084.211Stegastes_partitus
ENSLACG00000003258SPEN9982.584ENSSPAG00000006014-8975.285Stegastes_partitus
ENSLACG00000003258SPEN8563.790ENSSSCG00000034484SPEN9763.606Sus_scrofa
ENSLACG00000003258SPEN7783.041ENSTRUG00000021008si:ch1073-335m2.27483.041Takifugu_rubripes
ENSLACG00000003258SPEN10045.833ENSTRUG00000024350-7386.420Takifugu_rubripes
ENSLACG00000003258SPEN8983.041ENSTNIG00000014666si:ch1073-335m2.210045.465Tetraodon_nigroviridis
ENSLACG00000003258SPEN10087.037ENSTNIG00000010907-9787.037Tetraodon_nigroviridis
ENSLACG00000003258SPEN7587.374ENSTBEG00000003628SPEN7387.374Tupaia_belangeri
ENSLACG00000003258SPEN8284.689ENSTTRG00000015704SPEN7988.205Tursiops_truncatus
ENSLACG00000003258SPEN9795.652ENSUAMG00000009600SPEN8995.652Ursus_americanus
ENSLACG00000003258SPEN9795.652ENSUMAG00000021641SPEN8995.652Ursus_maritimus
ENSLACG00000003258SPEN9996.273ENSVVUG00000028951SPEN96100.000Vulpes_vulpes
ENSLACG00000003258SPEN10056.755ENSXETG00000023114SPEN6195.062Xenopus_tropicalis
ENSLACG00000003258SPEN8984.024ENSXCOG00000004516si:ch1073-335m2.29484.024Xiphophorus_couchianus
ENSLACG00000003258SPEN9983.851ENSXMAG00000021384-8974.144Xiphophorus_maculatus
ENSLACG00000003258SPEN8984.024ENSXMAG00000029887si:ch1073-335m2.29484.024Xiphophorus_maculatus

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