EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000003314 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 3402 bases
Position: chrJH130136.1:78348-81749
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000003722	RVT_1	PF00078.27	7.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000003756	-	3153	-	ENSLACP00000003722	1051 (aa)	-	H3A251

Gene Model

Click here to download ENSLACG00000003314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003314's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000003314	-	63	37.801	ENSLACG00000010776	-	99	54.386
ENSLACG00000003314	-	72	42.231	ENSLACG00000010862	-	80	42.231
ENSLACG00000003314	-	74	36.510	ENSLACG00000007131	-	99	36.510
ENSLACG00000003314	-	51	42.583	ENSLACG00000017143	-	89	42.583
ENSLACG00000003314	-	52	30.233	ENSLACG00000016980	-	61	30.233
ENSLACG00000003314	-	61	92.000	ENSLACG00000010367	-	91	92.500
ENSLACG00000003314	-	50	30.293	ENSLACG00000007522	-	80	30.293
ENSLACG00000003314	-	60	81.240	ENSLACG00000001186	-	87	81.240
ENSLACG00000003314	-	55	39.200	ENSLACG00000002169	-	99	39.200
ENSLACG00000003314	-	96	35.133	ENSLACG00000014947	-	89	35.417
ENSLACG00000003314	-	61	43.020	ENSLACG00000009168	-	92	41.256
ENSLACG00000003314	-	51	30.396	ENSLACG00000001918	-	86	30.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003314	-	59	42.082	ENSAPOG00000012937	-	92	42.082	Acanthochromis_polyacanthus
ENSLACG00000003314	-	58	42.456	ENSAPOG00000021580	-	92	42.456	Acanthochromis_polyacanthus
ENSLACG00000003314	-	96	39.216	ENSAPOG00000007435	-	83	39.216	Acanthochromis_polyacanthus
ENSLACG00000003314	-	96	45.022	ENSACLG00000002243	-	83	45.022	Astatotilapia_calliptera
ENSLACG00000003314	-	71	50.313	ENSACLG00000004748	-	91	50.313	Astatotilapia_calliptera
ENSLACG00000003314	-	96	39.856	ENSACLG00000002238	-	94	39.856	Astatotilapia_calliptera
ENSLACG00000003314	-	58	47.619	ENSACLG00000027124	-	91	47.619	Astatotilapia_calliptera
ENSLACG00000003314	-	85	47.510	ENSACLG00000005909	-	88	47.510	Astatotilapia_calliptera
ENSLACG00000003314	-	98	38.434	ENSACLG00000018325	-	84	38.576	Astatotilapia_calliptera
ENSLACG00000003314	-	98	38.347	ENSACLG00000002872	-	84	38.347	Astatotilapia_calliptera
ENSLACG00000003314	-	96	43.357	ENSACLG00000016675	-	83	43.357	Astatotilapia_calliptera
ENSLACG00000003314	-	98	47.581	ENSCSEG00000010440	-	83	47.581	Cynoglossus_semilaevis
ENSLACG00000003314	-	94	42.239	ENSFHEG00000022554	-	75	42.239	Fundulus_heteroclitus
ENSLACG00000003314	-	60	41.509	ENSONIG00000020960	-	90	41.509	Oreochromis_niloticus
ENSLACG00000003314	-	85	49.167	ENSOMEG00000023951	-	88	45.682	Oryzias_melastigma