EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000003328 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1086 bases
Position: chrJH127641.1:79160-80245
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000003736	zf-CCHC	PF00098.23	2e-08	1	2
ENSLACP00000003736	zf-CCHC	PF00098.23	2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000003770	-	1086	-	ENSLACP00000003736	280 (aa)	-	H3A265

Gene Model

Click here to download ENSLACG00000003328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000003328	-	86	46.275	ENSLACG00000012103	-	76	46.275
ENSLACG00000003328	-	96	44.364	ENSLACG00000003445	-	67	44.364
ENSLACG00000003328	-	84	46.988	ENSLACG00000012216	-	81	46.988
ENSLACG00000003328	-	73	49.020	ENSLACG00000022551	-	53	49.020
ENSLACG00000003328	-	86	43.496	ENSLACG00000002973	-	65	43.496
ENSLACG00000003328	-	80	50.446	ENSLACG00000002300	-	68	50.446
ENSLACG00000003328	-	87	52.016	ENSLACG00000022202	-	62	52.016
ENSLACG00000003328	-	96	45.070	ENSLACG00000002864	-	93	45.070
ENSLACG00000003328	-	95	46.127	ENSLACG00000004809	-	60	46.127
ENSLACG00000003328	-	73	48.276	ENSLACG00000000032	-	58	48.276

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003328	-	75	38.389	ENSG00000247315	ZCCHC3	52	38.389	Homo_sapiens
ENSLACG00000003328	-	75	38.389	ENSAMEG00000013999	ZCCHC3	68	38.389	Ailuropoda_melanoleuca
ENSLACG00000003328	-	52	31.034	ENSATEG00000004599	-	64	31.034	Anabas_testudineus
ENSLACG00000003328	-	75	38.389	ENSANAG00000013484	ZCCHC3	53	38.389	Aotus_nancymaae
ENSLACG00000003328	-	52	30.201	ENSACLG00000011316	-	71	30.201	Astatotilapia_calliptera
ENSLACG00000003328	-	52	30.201	ENSACLG00000015881	-	72	30.201	Astatotilapia_calliptera
ENSLACG00000003328	-	52	30.201	ENSACLG00000014014	-	70	30.201	Astatotilapia_calliptera
ENSLACG00000003328	-	55	31.613	ENSAMXG00000035711	-	77	31.613	Astyanax_mexicanus
ENSLACG00000003328	-	81	31.304	ENSAMXG00000037658	-	68	31.304	Astyanax_mexicanus
ENSLACG00000003328	-	75	38.389	ENSBTAG00000002116	ZCCHC3	52	38.389	Bos_taurus
ENSLACG00000003328	-	84	35.565	ENSCJAG00000020839	ZCCHC3	59	35.565	Callithrix_jacchus
ENSLACG00000003328	-	75	38.389	ENSCAFG00000025206	ZCCHC3	75	38.389	Canis_familiaris
ENSLACG00000003328	-	75	38.389	ENSCAFG00020004076	ZCCHC3	52	38.389	Canis_lupus_dingo
ENSLACG00000003328	-	75	38.389	ENSCHIG00000009882	ZCCHC3	52	38.389	Capra_hircus
ENSLACG00000003328	-	75	38.389	ENSCPOG00000023974	ZCCHC3	54	38.389	Cavia_porcellus
ENSLACG00000003328	-	75	38.389	ENSCCAG00000016869	ZCCHC3	52	38.389	Cebus_capucinus
ENSLACG00000003328	-	75	38.389	ENSCATG00000022200	ZCCHC3	52	38.389	Cercocebus_atys
ENSLACG00000003328	-	75	38.389	ENSCLAG00000000269	ZCCHC3	53	38.389	Chinchilla_lanigera
ENSLACG00000003328	-	84	35.565	ENSCSAG00000018761	ZCCHC3	59	35.565	Chlorocebus_sabaeus
ENSLACG00000003328	-	84	35.565	ENSCANG00000010812	ZCCHC3	87	35.565	Colobus_angolensis_palliatus
ENSLACG00000003328	-	83	35.897	ENSCGRG00001009163	-	58	35.897	Cricetulus_griseus_chok1gshd
ENSLACG00000003328	-	85	35.833	ENSCGRG00001011895	-	66	35.833	Cricetulus_griseus_chok1gshd
ENSLACG00000003328	-	85	35.833	ENSCGRG00000008273	-	66	35.833	Cricetulus_griseus_crigri
ENSLACG00000003328	-	75	38.389	ENSDNOG00000047357	ZCCHC3	52	38.389	Dasypus_novemcinctus
ENSLACG00000003328	-	75	38.389	ENSEASG00005003629	ZCCHC3	52	38.389	Equus_asinus_asinus
ENSLACG00000003328	-	75	38.389	ENSECAG00000001035	ZCCHC3	52	38.389	Equus_caballus
ENSLACG00000003328	-	51	36.364	ENSELUG00000002602	-	76	36.364	Esox_lucius
ENSLACG00000003328	-	64	35.196	ENSELUG00000017799	-	58	35.196	Esox_lucius
ENSLACG00000003328	-	75	38.389	ENSFCAG00000026760	ZCCHC3	52	38.389	Felis_catus
ENSLACG00000003328	-	55	31.447	ENSGACG00000018075	-	94	31.447	Gasterosteus_aculeatus
ENSLACG00000003328	-	55	31.447	ENSGACG00000000773	-	91	31.447	Gasterosteus_aculeatus
ENSLACG00000003328	-	65	39.130	ENSGGOG00000044213	ZCCHC3	56	39.130	Gorilla_gorilla
ENSLACG00000003328	-	55	33.974	ENSHBUG00000011697	-	70	33.974	Haplochromis_burtoni
ENSLACG00000003328	-	59	30.539	ENSHBUG00000001589	-	86	30.539	Haplochromis_burtoni
ENSLACG00000003328	-	75	38.389	ENSHGLG00000019351	ZCCHC3	53	38.389	Heterocephalus_glaber_female
ENSLACG00000003328	-	75	35.545	ENSHGLG00100009699	ZCCHC3	60	35.545	Heterocephalus_glaber_male
ENSLACG00000003328	-	74	32.536	ENSIPUG00000000506	-	54	32.536	Ictalurus_punctatus
ENSLACG00000003328	-	75	38.389	ENSJJAG00000020375	Zcchc3	52	38.389	Jaculus_jaculus
ENSLACG00000003328	-	59	33.533	ENSLOCG00000017503	-	93	33.533	Lepisosteus_oculatus
ENSLACG00000003328	-	56	30.435	ENSLOCG00000017694	-	92	30.435	Lepisosteus_oculatus
ENSLACG00000003328	-	51	34.932	ENSLOCG00000002624	-	82	34.932	Lepisosteus_oculatus
ENSLACG00000003328	-	54	33.571	ENSLOCG00000000632	-	89	33.571	Lepisosteus_oculatus
ENSLACG00000003328	-	58	33.939	ENSLOCG00000017670	-	91	33.939	Lepisosteus_oculatus
ENSLACG00000003328	-	58	31.325	ENSLOCG00000017974	-	84	31.325	Lepisosteus_oculatus
ENSLACG00000003328	-	54	31.613	ENSLOCG00000017501	-	93	31.613	Lepisosteus_oculatus
ENSLACG00000003328	-	51	33.333	ENSLOCG00000010606	-	100	33.333	Lepisosteus_oculatus
ENSLACG00000003328	-	54	35.484	ENSLOCG00000017530	-	90	35.484	Lepisosteus_oculatus
ENSLACG00000003328	-	58	33.735	ENSLOCG00000017639	-	92	33.735	Lepisosteus_oculatus
ENSLACG00000003328	-	57	34.356	ENSLOCG00000006695	-	94	34.356	Lepisosteus_oculatus
ENSLACG00000003328	-	56	36.250	ENSLOCG00000017302	-	92	36.250	Lepisosteus_oculatus
ENSLACG00000003328	-	58	33.333	ENSLOCG00000017303	-	87	33.333	Lepisosteus_oculatus
ENSLACG00000003328	-	75	38.389	ENSLAFG00000030593	ZCCHC3	78	38.389	Loxodonta_africana
ENSLACG00000003328	-	75	38.389	ENSMFAG00000044780	ZCCHC3	52	38.389	Macaca_fascicularis
ENSLACG00000003328	-	75	38.389	ENSMMUG00000038935	ZCCHC3	52	38.389	Macaca_mulatta
ENSLACG00000003328	-	75	38.389	ENSMNEG00000000405	ZCCHC3	52	38.389	Macaca_nemestrina
ENSLACG00000003328	-	52	30.201	ENSMZEG00005028130	-	70	30.201	Maylandia_zebra
ENSLACG00000003328	-	75	38.389	ENSMICG00000031267	ZCCHC3	53	38.389	Microcebus_murinus
ENSLACG00000003328	-	75	37.915	ENSMOCG00000002870	Zcchc3	53	37.915	Microtus_ochrogaster
ENSLACG00000003328	-	75	38.389	MGP_CAROLIEiJ_G0024454	Zcchc3	53	38.389	Mus_caroli
ENSLACG00000003328	-	75	38.389	ENSMUSG00000074682	Zcchc3	53	38.389	Mus_musculus
ENSLACG00000003328	-	75	38.389	MGP_PahariEiJ_G0025898	Zcchc3	53	38.389	Mus_pahari
ENSLACG00000003328	-	75	38.389	MGP_SPRETEiJ_G0025375	Zcchc3	53	38.389	Mus_spretus
ENSLACG00000003328	-	81	36.245	ENSNGAG00000006074	Zcchc3	59	36.245	Nannospalax_galili
ENSLACG00000003328	-	51	30.612	ENSNBRG00000024092	-	74	30.612	Neolamprologus_brichardi
ENSLACG00000003328	-	75	36.493	ENSNLEG00000009533	ZCCHC3	52	36.493	Nomascus_leucogenys
ENSLACG00000003328	-	75	37.915	ENSOPRG00000005081	ZCCHC3	57	35.319	Ochotona_princeps
ENSLACG00000003328	-	75	38.863	ENSODEG00000010730	ZCCHC3	52	38.863	Octodon_degus
ENSLACG00000003328	-	75	37.915	ENSOCUG00000017024	ZCCHC3	56	37.915	Oryctolagus_cuniculus
ENSLACG00000003328	-	75	38.389	ENSOGAG00000025208	ZCCHC3	60	35.656	Otolemur_garnettii
ENSLACG00000003328	-	75	38.389	ENSOARG00000019161	ZCCHC3	73	38.389	Ovis_aries
ENSLACG00000003328	-	75	38.389	ENSPPAG00000010453	-	89	35.443	Pan_paniscus
ENSLACG00000003328	-	75	38.389	ENSPPRG00000014724	ZCCHC3	52	38.389	Panthera_pardus
ENSLACG00000003328	-	75	35.071	ENSPTIG00000009393	ZCCHC3	85	35.071	Panthera_tigris_altaica
ENSLACG00000003328	-	75	38.389	ENSPTRG00000047645	ZCCHC3	52	38.389	Pan_troglodytes
ENSLACG00000003328	-	75	38.389	ENSPANG00000013450	ZCCHC3	52	38.389	Papio_anubis
ENSLACG00000003328	-	75	38.389	ENSPEMG00000009059	Zcchc3	53	38.389	Peromyscus_maniculatus_bairdii
ENSLACG00000003328	-	66	38.378	ENSPCAG00000008034	ZCCHC3	51	38.378	Procavia_capensis
ENSLACG00000003328	-	75	38.389	ENSPCOG00000012289	ZCCHC3	53	38.389	Propithecus_coquereli
ENSLACG00000003328	-	75	38.389	ENSPVAG00000000182	ZCCHC3	52	38.389	Pteropus_vampyrus
ENSLACG00000003328	-	75	38.389	ENSRNOG00000007520	Zcchc3	53	38.389	Rattus_norvegicus
ENSLACG00000003328	-	75	38.389	ENSRBIG00000029757	ZCCHC3	52	38.389	Rhinopithecus_bieti
ENSLACG00000003328	-	75	38.389	ENSRROG00000005210	ZCCHC3	52	38.389	Rhinopithecus_roxellana
ENSLACG00000003328	-	75	38.389	ENSSSCG00000007211	ZCCHC3	72	32.292	Sus_scrofa
ENSLACG00000003328	-	75	38.389	ENSTTRG00000008511	ZCCHC3	52	38.389	Tursiops_truncatus
ENSLACG00000003328	-	75	38.389	ENSUAMG00000023407	ZCCHC3	53	38.389	Ursus_americanus
ENSLACG00000003328	-	75	36.967	ENSVPAG00000011267	-	86	36.967	Vicugna_pacos
ENSLACG00000003328	-	63	44.318	ENSXETG00000033661	-	93	44.318	Xenopus_tropicalis
ENSLACG00000003328	-	63	44.318	ENSXETG00000033553	-	93	44.318	Xenopus_tropicalis
ENSLACG00000003328	-	62	41.618	ENSXETG00000031539	-	91	41.618	Xenopus_tropicalis
ENSLACG00000003328	-	63	44.318	ENSXETG00000034120	-	93	44.318	Xenopus_tropicalis
ENSLACG00000003328	-	63	44.571	ENSXETG00000032297	-	89	47.973	Xenopus_tropicalis
ENSLACG00000003328	-	63	44.571	ENSXETG00000031282	-	89	47.973	Xenopus_tropicalis
ENSLACG00000003328	-	85	37.344	ENSXETG00000033341	-	94	41.525	Xenopus_tropicalis
ENSLACG00000003328	-	55	46.104	ENSXETG00000033143	-	88	46.104	Xenopus_tropicalis
ENSLACG00000003328	-	63	44.571	ENSXETG00000032402	-	89	47.973	Xenopus_tropicalis
ENSLACG00000003328	-	61	44.186	ENSXETG00000030911	-	90	44.186	Xenopus_tropicalis
ENSLACG00000003328	-	63	44.886	ENSXETG00000034004	-	93	44.886	Xenopus_tropicalis
ENSLACG00000003328	-	87	36.735	ENSXETG00000005590	-	82	36.735	Xenopus_tropicalis
ENSLACG00000003328	-	63	44.318	ENSXETG00000033566	-	93	44.318	Xenopus_tropicalis
ENSLACG00000003328	-	71	33.990	ENSXCOG00000010666	-	53	33.990	Xiphophorus_couchianus