EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000003376 (Gene tree)
Gene ID: 102345286
Gene Symbol: APTX
Alias: AOA|AOA1|AXA1|EAOH|EOAHA|FLJ20157
Full Name: aprataxin
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 21144 bases
Position: chrJH129551.1:80979-102122
Accession: 102345286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000003788	DcpS_C	PF11969.8	1.3e-33	1	1
ENSLACP00000003789	DcpS_C	PF11969.8	3.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000003823	APTX-202	1119	-	ENSLACP00000003789	372 (aa)	-	H3A2B8
ENSLACT00000003822	APTX-201	4310	XM_006011933	ENSLACP00000003788	353 (aa)	XP_006011995	H3A2B7

Gene Model

Click here to download ENSLACG00000003376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003376	APTX	99	62.216	ENSG00000137074	APTX	97	74.419	Homo_sapiens
ENSLACG00000003376	APTX	100	58.380	ENSAPOG00000008785	aptx	100	58.380	Acanthochromis_polyacanthus
ENSLACG00000003376	APTX	100	61.127	ENSAMEG00000007648	APTX	99	58.221	Ailuropoda_melanoleuca
ENSLACG00000003376	APTX	100	55.056	ENSACIG00000002035	aptx	100	54.775	Amphilophus_citrinellus
ENSLACG00000003376	APTX	100	58.380	ENSAOCG00000000634	aptx	100	58.380	Amphiprion_ocellaris
ENSLACG00000003376	APTX	100	58.380	ENSAPEG00000017253	aptx	100	58.380	Amphiprion_percula
ENSLACG00000003376	APTX	100	58.310	ENSATEG00000017383	aptx	100	57.746	Anabas_testudineus
ENSLACG00000003376	APTX	91	59.517	ENSAPLG00000015645	APTX	100	59.517	Anas_platyrhynchos
ENSLACG00000003376	APTX	100	59.437	ENSACAG00000003581	APTX	95	59.718	Anolis_carolinensis
ENSLACG00000003376	APTX	99	63.068	ENSANAG00000030160	APTX	93	74.419	Aotus_nancymaae
ENSLACG00000003376	APTX	99	58.310	ENSACLG00000018887	aptx	100	58.310	Astatotilapia_calliptera
ENSLACG00000003376	APTX	99	58.757	ENSAMXG00000039899	aptx	99	57.790	Astyanax_mexicanus
ENSLACG00000003376	APTX	99	60.452	ENSBTAG00000013947	APTX	98	59.384	Bos_taurus
ENSLACG00000003376	APTX	99	62.216	ENSCJAG00000007940	APTX	93	74.419	Callithrix_jacchus
ENSLACG00000003376	APTX	100	61.127	ENSCAFG00000001812	APTX	100	60.056	Canis_familiaris
ENSLACG00000003376	APTX	100	61.127	ENSCAFG00020015598	APTX	100	60.056	Canis_lupus_dingo
ENSLACG00000003376	APTX	99	60.169	ENSCHIG00000012896	APTX	99	59.605	Capra_hircus
ENSLACG00000003376	APTX	99	60.511	ENSTSYG00000003041	APTX	99	60.166	Carlito_syrichta
ENSLACG00000003376	APTX	58	70.807	ENSCAPG00000013470	APTX	99	70.807	Cavia_aperea
ENSLACG00000003376	APTX	99	61.080	ENSCPOG00000005975	APTX	99	72.222	Cavia_porcellus
ENSLACG00000003376	APTX	99	62.216	ENSCCAG00000036783	APTX	97	74.419	Cebus_capucinus
ENSLACG00000003376	APTX	99	61.408	ENSCATG00000042639	APTX	97	74.419	Cercocebus_atys
ENSLACG00000003376	APTX	99	61.364	ENSCLAG00000012185	APTX	99	74.576	Chinchilla_lanigera
ENSLACG00000003376	APTX	99	61.127	ENSCSAG00000009885	APTX	95	61.127	Chlorocebus_sabaeus
ENSLACG00000003376	APTX	100	64.903	ENSCPBG00000023973	APTX	98	65.181	Chrysemys_picta_bellii
ENSLACG00000003376	APTX	94	42.241	ENSCING00000008741	-	91	41.954	Ciona_intestinalis
ENSLACG00000003376	APTX	98	39.496	ENSCSAVG00000008038	-	97	39.216	Ciona_savignyi
ENSLACG00000003376	APTX	99	61.127	ENSCANG00000037253	APTX	97	72.093	Colobus_angolensis_palliatus
ENSLACG00000003376	APTX	99	60.684	ENSCGRG00001000705	Aptx	98	72.222	Cricetulus_griseus_chok1gshd
ENSLACG00000003376	APTX	99	60.684	ENSCGRG00000014159	Aptx	98	72.222	Cricetulus_griseus_crigri
ENSLACG00000003376	APTX	99	54.930	ENSCSEG00000009549	aptx	99	54.930	Cynoglossus_semilaevis
ENSLACG00000003376	APTX	100	57.746	ENSCVAG00000011942	aptx	99	57.746	Cyprinodon_variegatus
ENSLACG00000003376	APTX	99	53.672	ENSDARG00000027143	aptx	99	54.802	Danio_rerio
ENSLACG00000003376	APTX	100	62.011	ENSDNOG00000018498	APTX	96	62.011	Dasypus_novemcinctus
ENSLACG00000003376	APTX	99	59.444	ENSDORG00000002139	Aptx	99	73.889	Dipodomys_ordii
ENSLACG00000003376	APTX	50	41.143	FBgn0038704	CG5316	87	44.628	Drosophila_melanogaster
ENSLACG00000003376	APTX	83	57.823	ENSETEG00000012459	APTX	79	57.966	Echinops_telfairi
ENSLACG00000003376	APTX	99	45.869	ENSEBUG00000013914	aptx	96	45.506	Eptatretus_burgeri
ENSLACG00000003376	APTX	100	58.310	ENSEASG00005004566	APTX	100	57.821	Equus_asinus_asinus
ENSLACG00000003376	APTX	100	59.437	ENSECAG00000012674	APTX	92	59.437	Equus_caballus
ENSLACG00000003376	APTX	86	58.306	ENSEEUG00000010693	APTX	98	57.547	Erinaceus_europaeus
ENSLACG00000003376	APTX	100	62.535	ENSFCAG00000008728	APTX	100	61.453	Felis_catus
ENSLACG00000003376	APTX	100	61.281	ENSFALG00000001230	APTX	100	61.281	Ficedula_albicollis
ENSLACG00000003376	APTX	99	59.091	ENSFDAG00000013752	APTX	98	72.881	Fukomys_damarensis
ENSLACG00000003376	APTX	83	55.743	ENSFHEG00000021328	aptx	73	54.934	Fundulus_heteroclitus
ENSLACG00000003376	APTX	99	59.040	ENSGMOG00000012505	aptx	99	59.040	Gadus_morhua
ENSLACG00000003376	APTX	99	59.777	ENSGALG00000001954	APTX	99	59.777	Gallus_gallus
ENSLACG00000003376	APTX	100	57.183	ENSGAFG00000005086	aptx	100	57.183	Gambusia_affinis
ENSLACG00000003376	APTX	99	57.910	ENSGACG00000017887	aptx	99	58.192	Gasterosteus_aculeatus
ENSLACG00000003376	APTX	100	64.903	ENSGAGG00000013230	APTX	100	65.181	Gopherus_agassizii
ENSLACG00000003376	APTX	86	63.158	ENSGGOG00000014232	APTX	92	67.273	Gorilla_gorilla
ENSLACG00000003376	APTX	99	58.310	ENSHBUG00000021058	aptx	100	58.310	Haplochromis_burtoni
ENSLACG00000003376	APTX	99	59.104	ENSHGLG00000015093	APTX	99	72.778	Heterocephalus_glaber_female
ENSLACG00000003376	APTX	99	59.664	ENSHGLG00100013482	APTX	99	72.778	Heterocephalus_glaber_male
ENSLACG00000003376	APTX	99	54.674	ENSHCOG00000018216	aptx	96	54.674	Hippocampus_comes
ENSLACG00000003376	APTX	99	57.062	ENSIPUG00000017548	aptx	99	55.807	Ictalurus_punctatus
ENSLACG00000003376	APTX	99	61.080	ENSSTOG00000005185	APTX	99	72.222	Ictidomys_tridecemlineatus
ENSLACG00000003376	APTX	99	57.386	ENSJJAG00000015653	Aptx	99	57.102	Jaculus_jaculus
ENSLACG00000003376	APTX	99	58.192	ENSKMAG00000000117	aptx	99	58.192	Kryptolebias_marmoratus
ENSLACG00000003376	APTX	99	56.474	ENSLBEG00000015353	aptx	99	57.062	Labrus_bergylta
ENSLACG00000003376	APTX	99	50.689	ENSLBEG00000021489	APTX	99	51.397	Labrus_bergylta
ENSLACG00000003376	APTX	100	62.254	ENSLOCG00000011556	aptx	96	60.109	Lepisosteus_oculatus
ENSLACG00000003376	APTX	100	61.408	ENSLAFG00000005665	APTX	99	61.003	Loxodonta_africana
ENSLACG00000003376	APTX	99	61.127	ENSMFAG00000043141	APTX	96	61.127	Macaca_fascicularis
ENSLACG00000003376	APTX	99	61.127	ENSMMUG00000007724	APTX	96	60.615	Macaca_mulatta
ENSLACG00000003376	APTX	99	60.845	ENSMNEG00000042341	APTX	97	74.419	Macaca_nemestrina
ENSLACG00000003376	APTX	99	61.408	ENSMLEG00000035137	APTX	92	74.419	Mandrillus_leucophaeus
ENSLACG00000003376	APTX	100	57.746	ENSMAMG00000018377	aptx	100	57.746	Mastacembelus_armatus
ENSLACG00000003376	APTX	99	58.028	ENSMZEG00005022621	aptx	100	57.910	Maylandia_zebra
ENSLACG00000003376	APTX	50	72.067	ENSMGAG00000005736	APTX	97	73.295	Meleagris_gallopavo
ENSLACG00000003376	APTX	99	60.399	ENSMAUG00000006039	Aptx	98	72.778	Mesocricetus_auratus
ENSLACG00000003376	APTX	99	62.216	ENSMICG00000006603	APTX	92	69.767	Microcebus_murinus
ENSLACG00000003376	APTX	99	59.718	ENSMOCG00000000869	Aptx	99	71.667	Microtus_ochrogaster
ENSLACG00000003376	APTX	99	58.074	ENSMMOG00000007028	aptx	99	58.074	Mola_mola
ENSLACG00000003376	APTX	99	55.028	ENSMODG00000003365	APTX	99	54.930	Monodelphis_domestica
ENSLACG00000003376	APTX	100	53.371	ENSMALG00000003828	aptx	100	53.371	Monopterus_albus
ENSLACG00000003376	APTX	66	73.295	MGP_CAROLIEiJ_G0025897	-	98	73.295	Mus_caroli
ENSLACG00000003376	APTX	99	60.563	ENSMUSG00000028411	Aptx	98	73.295	Mus_musculus
ENSLACG00000003376	APTX	99	60.511	MGP_PahariEiJ_G0024020	Aptx	99	59.091	Mus_pahari
ENSLACG00000003376	APTX	99	60.511	MGP_SPRETEiJ_G0026846	Aptx	96	58.592	Mus_spretus
ENSLACG00000003376	APTX	100	62.254	ENSMPUG00000004290	APTX	100	61.173	Mustela_putorius_furo
ENSLACG00000003376	APTX	100	60.282	ENSMLUG00000016081	APTX	95	60.504	Myotis_lucifugus
ENSLACG00000003376	APTX	99	57.983	ENSNGAG00000016314	Aptx	99	72.881	Nannospalax_galili
ENSLACG00000003376	APTX	99	58.475	ENSNBRG00000014199	aptx	100	58.357	Neolamprologus_brichardi
ENSLACG00000003376	APTX	99	62.784	ENSNLEG00000032184	APTX	99	62.288	Nomascus_leucogenys
ENSLACG00000003376	APTX	99	55.650	ENSMEUG00000004153	APTX	100	53.760	Notamacropus_eugenii
ENSLACG00000003376	APTX	86	59.804	ENSOPRG00000012403	APTX	96	58.900	Ochotona_princeps
ENSLACG00000003376	APTX	99	60.227	ENSODEG00000015832	-	99	73.889	Octodon_degus
ENSLACG00000003376	APTX	72	70.256	ENSODEG00000000097	-	99	63.319	Octodon_degus
ENSLACG00000003376	APTX	100	58.427	ENSONIG00000014541	aptx	87	56.150	Oreochromis_niloticus
ENSLACG00000003376	APTX	86	55.769	ENSOANG00000009878	APTX	98	55.627	Ornithorhynchus_anatinus
ENSLACG00000003376	APTX	67	75.419	ENSOCUG00000025059	-	93	74.586	Oryctolagus_cuniculus
ENSLACG00000003376	APTX	99	61.254	ENSOCUG00000000738	-	98	60.726	Oryctolagus_cuniculus
ENSLACG00000003376	APTX	100	57.183	ENSORLG00000006237	aptx	100	57.423	Oryzias_latipes
ENSLACG00000003376	APTX	100	57.983	ENSORLG00020021478	aptx	100	57.983	Oryzias_latipes_hni
ENSLACG00000003376	APTX	100	57.303	ENSORLG00015021873	aptx	100	57.303	Oryzias_latipes_hsok
ENSLACG00000003376	APTX	92	51.775	ENSOMEG00000007875	aptx	88	51.775	Oryzias_melastigma
ENSLACG00000003376	APTX	99	61.648	ENSOGAG00000005388	APTX	98	60.109	Otolemur_garnettii
ENSLACG00000003376	APTX	99	60.227	ENSOARG00000009598	APTX	95	59.943	Ovis_aries
ENSLACG00000003376	APTX	99	61.932	ENSPPAG00000030295	APTX	98	60.815	Pan_paniscus
ENSLACG00000003376	APTX	100	62.535	ENSPPRG00000017524	APTX	100	61.453	Panthera_pardus
ENSLACG00000003376	APTX	100	62.535	ENSPTIG00000020000	APTX	100	61.453	Panthera_tigris_altaica
ENSLACG00000003376	APTX	99	61.932	ENSPTRG00000020850	APTX	97	74.419	Pan_troglodytes
ENSLACG00000003376	APTX	99	61.127	ENSPANG00000025301	APTX	92	74.419	Papio_anubis
ENSLACG00000003376	APTX	100	62.745	ENSPKIG00000013601	aptx	100	61.905	Paramormyrops_kingsleyae
ENSLACG00000003376	APTX	100	62.079	ENSPSIG00000010521	APTX	99	60.215	Pelodiscus_sinensis
ENSLACG00000003376	APTX	99	55.807	ENSPMGG00000018649	aptx	100	55.807	Periophthalmus_magnuspinnatus
ENSLACG00000003376	APTX	99	60.623	ENSPEMG00000007747	Aptx	99	72.778	Peromyscus_maniculatus_bairdii
ENSLACG00000003376	APTX	99	46.111	ENSPMAG00000008417	aptx	97	46.133	Petromyzon_marinus
ENSLACG00000003376	APTX	99	59.155	ENSPCIG00000029852	APTX	99	58.873	Phascolarctos_cinereus
ENSLACG00000003376	APTX	100	58.028	ENSPFOG00000004992	aptx	100	58.310	Poecilia_formosa
ENSLACG00000003376	APTX	100	58.028	ENSPFOG00000005131	-	99	58.310	Poecilia_formosa
ENSLACG00000003376	APTX	100	58.028	ENSPLAG00000007960	APTX	100	58.310	Poecilia_latipinna
ENSLACG00000003376	APTX	100	58.028	ENSPLAG00000007906	aptx	100	58.310	Poecilia_latipinna
ENSLACG00000003376	APTX	100	58.310	ENSPMEG00000019789	APTX	100	58.592	Poecilia_mexicana
ENSLACG00000003376	APTX	100	58.310	ENSPMEG00000018504	aptx	100	58.592	Poecilia_mexicana
ENSLACG00000003376	APTX	100	53.239	ENSPREG00000004375	aptx	100	52.676	Poecilia_reticulata
ENSLACG00000003376	APTX	99	62.500	ENSPPYG00000019142	APTX	95	61.864	Pongo_abelii
ENSLACG00000003376	APTX	100	51.549	ENSPCAG00000010014	APTX	99	51.268	Procavia_capensis
ENSLACG00000003376	APTX	99	62.216	ENSPCOG00000016780	APTX	99	61.582	Propithecus_coquereli
ENSLACG00000003376	APTX	100	58.543	ENSPVAG00000011468	APTX	97	57.260	Pteropus_vampyrus
ENSLACG00000003376	APTX	99	58.310	ENSPNYG00000007675	aptx	100	58.310	Pundamilia_nyererei
ENSLACG00000003376	APTX	99	56.215	ENSPNAG00000015984	aptx	99	55.899	Pygocentrus_nattereri
ENSLACG00000003376	APTX	99	60.511	ENSRNOG00000006582	Aptx	99	59.091	Rattus_norvegicus
ENSLACG00000003376	APTX	99	62.216	ENSRBIG00000042913	APTX	99	60.845	Rhinopithecus_bieti
ENSLACG00000003376	APTX	99	60.845	ENSRROG00000035395	APTX	92	74.419	Rhinopithecus_roxellana
ENSLACG00000003376	APTX	99	62.784	ENSSBOG00000025215	APTX	99	61.127	Saimiri_boliviensis_boliviensis
ENSLACG00000003376	APTX	98	58.739	ENSSHAG00000012205	APTX	99	55.946	Sarcophilus_harrisii
ENSLACG00000003376	APTX	100	63.288	ENSSFOG00015009267	aptx	100	63.014	Scleropages_formosus
ENSLACG00000003376	APTX	100	58.172	ENSSMAG00000008839	aptx	100	58.708	Scophthalmus_maximus
ENSLACG00000003376	APTX	100	57.143	ENSSDUG00000001989	aptx	100	57.465	Seriola_dumerili
ENSLACG00000003376	APTX	100	56.303	ENSSLDG00000004915	aptx	100	56.461	Seriola_lalandi_dorsalis
ENSLACG00000003376	APTX	100	63.788	ENSSPUG00000008994	APTX	89	61.394	Sphenodon_punctatus
ENSLACG00000003376	APTX	100	57.618	ENSSPAG00000020373	aptx	100	58.146	Stegastes_partitus
ENSLACG00000003376	APTX	99	60.452	ENSSSCG00000011001	APTX	100	59.497	Sus_scrofa
ENSLACG00000003376	APTX	100	58.939	ENSTGUG00000001441	APTX	100	58.449	Taeniopygia_guttata
ENSLACG00000003376	APTX	99	54.802	ENSTRUG00000009794	aptx	99	55.085	Takifugu_rubripes
ENSLACG00000003376	APTX	99	57.062	ENSTNIG00000010570	aptx	99	57.345	Tetraodon_nigroviridis
ENSLACG00000003376	APTX	99	55.966	ENSTBEG00000008504	APTX	97	55.372	Tupaia_belangeri
ENSLACG00000003376	APTX	93	56.495	ENSTTRG00000007384	APTX	96	55.821	Tursiops_truncatus
ENSLACG00000003376	APTX	99	61.864	ENSUAMG00000003700	APTX	97	61.299	Ursus_americanus
ENSLACG00000003376	APTX	99	61.864	ENSUMAG00000005837	APTX	99	61.299	Ursus_maritimus
ENSLACG00000003376	APTX	79	67.442	ENSVPAG00000001297	APTX	79	67.442	Vicugna_pacos
ENSLACG00000003376	APTX	100	61.127	ENSVVUG00000021130	APTX	100	60.056	Vulpes_vulpes
ENSLACG00000003376	APTX	99	58.757	ENSXETG00000024143	aptx	99	58.659	Xenopus_tropicalis
ENSLACG00000003376	APTX	100	57.022	ENSXCOG00000005020	aptx	100	57.022	Xiphophorus_couchianus
ENSLACG00000003376	APTX	100	57.746	ENSXMAG00000022086	aptx	97	57.584	Xiphophorus_maculatus