EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000003399 (Gene tree)
Gene ID: -
Gene Symbol: gpkow
Alias: mp:zf637-1-001655|si:dz150f13.5|t54l|wu:fb38d03|zf637-1-001655|zgc:152714
Full Name: G patch domain and KOW motifs
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 12836 bases
Position: chrJH130884.1:81934-94769
Accession: ZDB-GENE-030616-159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000003814	KOW	PF00467.29	3.3e-05	1	1
ENSLACP00000003814	G-patch	PF01585.23	4.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000003849	-	964	-	ENSLACP00000003814	273 (aa)	-	H3A2E3

Gene Model

Click here to download ENSLACG00000003399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003399	gpkow	91	52.590	ENSG00000068394	GPKOW	53	52.590	Homo_sapiens
ENSLACG00000003399	gpkow	99	58.667	ENSAPOG00000004970	gpkow	58	57.616	Acanthochromis_polyacanthus
ENSLACG00000003399	gpkow	91	50.189	ENSAMEG00000012303	GPKOW	53	50.775	Ailuropoda_melanoleuca
ENSLACG00000003399	gpkow	100	59.477	ENSACIG00000010755	gpkow	59	60.000	Amphilophus_citrinellus
ENSLACG00000003399	gpkow	99	58.389	ENSAOCG00000022818	gpkow	57	57.667	Amphiprion_ocellaris
ENSLACG00000003399	gpkow	99	57.667	ENSAPEG00000021416	gpkow	58	56.954	Amphiprion_percula
ENSLACG00000003399	gpkow	100	60.726	ENSATEG00000023744	gpkow	58	59.076	Anabas_testudineus
ENSLACG00000003399	gpkow	100	59.722	ENSACAG00000016598	GPKOW	58	60.627	Anolis_carolinensis
ENSLACG00000003399	gpkow	98	43.416	ENSANAG00000033498	-	55	42.701	Aotus_nancymaae
ENSLACG00000003399	gpkow	91	52.778	ENSANAG00000030473	-	52	52.000	Aotus_nancymaae
ENSLACG00000003399	gpkow	91	52.381	ENSANAG00000036571	-	62	51.600	Aotus_nancymaae
ENSLACG00000003399	gpkow	91	50.752	ENSBTAG00000002568	GPKOW	54	49.421	Bos_taurus
ENSLACG00000003399	gpkow	91	52.381	ENSCJAG00000002656	GPKOW	52	51.600	Callithrix_jacchus
ENSLACG00000003399	gpkow	91	50.189	ENSCAFG00000015794	GPKOW	53	50.000	Canis_familiaris
ENSLACG00000003399	gpkow	91	50.189	ENSCAFG00020020258	GPKOW	53	50.000	Canis_lupus_dingo
ENSLACG00000003399	gpkow	91	53.125	ENSCHIG00000013277	GPKOW	54	50.385	Capra_hircus
ENSLACG00000003399	gpkow	94	50.951	ENSTSYG00000033182	-	55	50.951	Carlito_syrichta
ENSLACG00000003399	gpkow	91	49.603	ENSTSYG00000029374	-	53	49.603	Carlito_syrichta
ENSLACG00000003399	gpkow	91	50.584	ENSCAPG00000011329	GPKOW	67	50.769	Cavia_aperea
ENSLACG00000003399	gpkow	91	50.973	ENSCPOG00000013270	GPKOW	53	51.154	Cavia_porcellus
ENSLACG00000003399	gpkow	87	52.479	ENSCCAG00000034660	-	52	51.667	Cebus_capucinus
ENSLACG00000003399	gpkow	91	49.206	ENSCCAG00000022161	-	50	48.400	Cebus_capucinus
ENSLACG00000003399	gpkow	91	52.590	ENSCATG00000041433	GPKOW	53	52.590	Cercocebus_atys
ENSLACG00000003399	gpkow	91	50.000	ENSCLAG00000002220	-	53	50.000	Chinchilla_lanigera
ENSLACG00000003399	gpkow	91	46.538	ENSCLAG00000007117	-	51	46.538	Chinchilla_lanigera
ENSLACG00000003399	gpkow	91	52.590	ENSCSAG00000012926	GPKOW	53	52.590	Chlorocebus_sabaeus
ENSLACG00000003399	gpkow	100	59.794	ENSCPBG00000016609	GPKOW	58	64.605	Chrysemys_picta_bellii
ENSLACG00000003399	gpkow	91	52.191	ENSCANG00000037595	GPKOW	53	52.191	Colobus_angolensis_palliatus
ENSLACG00000003399	gpkow	91	48.679	ENSCGRG00001016210	Gpkow	56	47.601	Cricetulus_griseus_chok1gshd
ENSLACG00000003399	gpkow	91	48.679	ENSCGRG00000013835	Gpkow	56	47.601	Cricetulus_griseus_crigri
ENSLACG00000003399	gpkow	100	55.482	ENSCSEG00000020569	gpkow	59	56.811	Cynoglossus_semilaevis
ENSLACG00000003399	gpkow	100	59.524	ENSCVAG00000017066	gpkow	57	59.524	Cyprinodon_variegatus
ENSLACG00000003399	gpkow	100	60.339	ENSDARG00000029612	gpkow	58	60.000	Danio_rerio
ENSLACG00000003399	gpkow	91	49.612	ENSDNOG00000016647	GPKOW	60	50.000	Dasypus_novemcinctus
ENSLACG00000003399	gpkow	99	47.552	ENSDORG00000013663	Gpkow	57	47.143	Dipodomys_ordii
ENSLACG00000003399	gpkow	92	49.819	ENSEBUG00000001912	gpkow	64	49.819	Eptatretus_burgeri
ENSLACG00000003399	gpkow	91	51.793	ENSEASG00005019852	GPKOW	56	51.793	Equus_asinus_asinus
ENSLACG00000003399	gpkow	91	50.000	ENSECAG00000018251	GPKOW	53	50.000	Equus_caballus
ENSLACG00000003399	gpkow	94	46.512	ENSEEUG00000008839	GPKOW	56	45.353	Erinaceus_europaeus
ENSLACG00000003399	gpkow	100	57.679	ENSELUG00000022223	gpkow	57	56.566	Esox_lucius
ENSLACG00000003399	gpkow	91	53.175	ENSFCAG00000003818	GPKOW	53	53.175	Felis_catus
ENSLACG00000003399	gpkow	94	46.667	ENSFDAG00000001669	GPKOW	56	46.667	Fukomys_damarensis
ENSLACG00000003399	gpkow	99	62.069	ENSFHEG00000022349	gpkow	56	61.246	Fundulus_heteroclitus
ENSLACG00000003399	gpkow	100	58.608	ENSGMOG00000019661	gpkow	54	58.608	Gadus_morhua
ENSLACG00000003399	gpkow	55	59.732	ENSGAFG00000000934	gpkow	67	59.732	Gambusia_affinis
ENSLACG00000003399	gpkow	99	55.705	ENSGACG00000012127	gpkow	52	69.591	Gasterosteus_aculeatus
ENSLACG00000003399	gpkow	92	65.079	ENSGAGG00000006302	GPKOW	64	65.476	Gopherus_agassizii
ENSLACG00000003399	gpkow	91	52.191	ENSGGOG00000013685	GPKOW	53	52.191	Gorilla_gorilla
ENSLACG00000003399	gpkow	100	60.458	ENSHBUG00000010655	gpkow	54	60.458	Haplochromis_burtoni
ENSLACG00000003399	gpkow	91	48.249	ENSHGLG00000002746	GPKOW	53	48.249	Heterocephalus_glaber_female
ENSLACG00000003399	gpkow	91	48.249	ENSHGLG00100014283	GPKOW	54	48.249	Heterocephalus_glaber_male
ENSLACG00000003399	gpkow	91	50.000	ENSSTOG00000014593	GPKOW	53	50.000	Ictidomys_tridecemlineatus
ENSLACG00000003399	gpkow	91	48.134	ENSJJAG00000013397	Gpkow	57	46.429	Jaculus_jaculus
ENSLACG00000003399	gpkow	100	57.190	ENSKMAG00000006241	gpkow	58	57.190	Kryptolebias_marmoratus
ENSLACG00000003399	gpkow	99	57.566	ENSLBEG00000013238	gpkow	58	57.333	Labrus_bergylta
ENSLACG00000003399	gpkow	99	58.528	ENSLOCG00000014776	gpkow	58	57.426	Lepisosteus_oculatus
ENSLACG00000003399	gpkow	91	52.326	ENSLAFG00000005896	GPKOW	56	49.814	Loxodonta_africana
ENSLACG00000003399	gpkow	91	52.988	ENSMFAG00000035346	GPKOW	53	52.988	Macaca_fascicularis
ENSLACG00000003399	gpkow	91	52.988	ENSMMUG00000020557	GPKOW	51	52.988	Macaca_mulatta
ENSLACG00000003399	gpkow	91	52.590	ENSMNEG00000004803	GPKOW	53	52.590	Macaca_nemestrina
ENSLACG00000003399	gpkow	91	52.590	ENSMLEG00000033293	GPKOW	53	52.590	Mandrillus_leucophaeus
ENSLACG00000003399	gpkow	99	60.000	ENSMAMG00000024235	gpkow	57	58.621	Mastacembelus_armatus
ENSLACG00000003399	gpkow	100	60.131	ENSMZEG00005026357	gpkow	54	60.131	Maylandia_zebra
ENSLACG00000003399	gpkow	91	51.793	ENSMICG00000045083	GPKOW	53	51.793	Microcebus_murinus
ENSLACG00000003399	gpkow	91	48.855	ENSMOCG00000019251	Gpkow	54	50.382	Microtus_ochrogaster
ENSLACG00000003399	gpkow	92	50.199	ENSMODG00000011443	-	58	51.394	Monodelphis_domestica
ENSLACG00000003399	gpkow	92	50.598	ENSMODG00000023705	-	51	51.793	Monodelphis_domestica
ENSLACG00000003399	gpkow	100	52.349	ENSMALG00000015148	gpkow	57	53.082	Monopterus_albus
ENSLACG00000003399	gpkow	90	50.192	MGP_CAROLIEiJ_G0032893	Gpkow	100	42.197	Mus_caroli
ENSLACG00000003399	gpkow	90	50.000	ENSMUSG00000031148	Gpkow	85	41.520	Mus_musculus
ENSLACG00000003399	gpkow	90	50.385	MGP_PahariEiJ_G0031441	Gpkow	85	42.690	Mus_pahari
ENSLACG00000003399	gpkow	63	41.618	MGP_SPRETEiJ_G0034041	-	100	41.618	Mus_spretus
ENSLACG00000003399	gpkow	99	49.643	ENSMPUG00000013808	GPKOW	57	49.643	Mustela_putorius_furo
ENSLACG00000003399	gpkow	56	51.613	ENSMLUG00000009281	-	50	51.613	Myotis_lucifugus
ENSLACG00000003399	gpkow	91	50.379	ENSNGAG00000005382	Gpkow	54	50.379	Nannospalax_galili
ENSLACG00000003399	gpkow	100	60.458	ENSNBRG00000008941	gpkow	61	60.458	Neolamprologus_brichardi
ENSLACG00000003399	gpkow	91	52.988	ENSNLEG00000007998	GPKOW	53	52.988	Nomascus_leucogenys
ENSLACG00000003399	gpkow	89	47.347	ENSMEUG00000007467	-	80	48.571	Notamacropus_eugenii
ENSLACG00000003399	gpkow	91	45.136	ENSOPRG00000016412	-	52	45.946	Ochotona_princeps
ENSLACG00000003399	gpkow	100	60.458	ENSONIG00000016834	gpkow	54	60.458	Oreochromis_niloticus
ENSLACG00000003399	gpkow	91	44.776	ENSOCUG00000010422	GPKOW	54	44.776	Oryctolagus_cuniculus
ENSLACG00000003399	gpkow	99	56.667	ENSORLG00000014442	gpkow	58	56.291	Oryzias_latipes
ENSLACG00000003399	gpkow	99	56.667	ENSORLG00020012795	gpkow	58	56.291	Oryzias_latipes_hni
ENSLACG00000003399	gpkow	99	56.667	ENSORLG00015006852	gpkow	58	56.291	Oryzias_latipes_hsok
ENSLACG00000003399	gpkow	99	56.333	ENSOMEG00000003236	gpkow	62	57.823	Oryzias_melastigma
ENSLACG00000003399	gpkow	91	42.460	ENSOGAG00000003644	GPKOW	53	42.460	Otolemur_garnettii
ENSLACG00000003399	gpkow	91	50.752	ENSOARG00000010927	GPKOW	54	50.385	Ovis_aries
ENSLACG00000003399	gpkow	91	52.988	ENSPPAG00000040116	GPKOW	53	52.988	Pan_paniscus
ENSLACG00000003399	gpkow	91	52.381	ENSPPRG00000016972	GPKOW	53	52.381	Panthera_pardus
ENSLACG00000003399	gpkow	91	49.434	ENSPTIG00000008398	GPKOW	53	50.579	Panthera_tigris_altaica
ENSLACG00000003399	gpkow	91	52.988	ENSPTRG00000047603	GPKOW	53	52.988	Pan_troglodytes
ENSLACG00000003399	gpkow	91	52.590	ENSPANG00000013477	GPKOW	53	52.590	Papio_anubis
ENSLACG00000003399	gpkow	100	58.188	ENSPKIG00000008382	gpkow	57	59.582	Paramormyrops_kingsleyae
ENSLACG00000003399	gpkow	100	62.457	ENSPMGG00000010880	gpkow	58	61.433	Periophthalmus_magnuspinnatus
ENSLACG00000003399	gpkow	94	49.265	ENSPEMG00000009966	Gpkow	56	48.897	Peromyscus_maniculatus_bairdii
ENSLACG00000003399	gpkow	99	58.725	ENSPFOG00000003065	gpkow	56	58.904	Poecilia_formosa
ENSLACG00000003399	gpkow	99	58.725	ENSPLAG00000023097	gpkow	56	58.904	Poecilia_latipinna
ENSLACG00000003399	gpkow	99	58.725	ENSPMEG00000002762	gpkow	56	58.562	Poecilia_mexicana
ENSLACG00000003399	gpkow	85	55.426	ENSPREG00000002671	gpkow	78	55.159	Poecilia_reticulata
ENSLACG00000003399	gpkow	91	53.175	ENSPCOG00000008505	GPKOW	53	52.191	Propithecus_coquereli
ENSLACG00000003399	gpkow	100	60.458	ENSPNYG00000014523	gpkow	58	60.458	Pundamilia_nyererei
ENSLACG00000003399	gpkow	100	56.688	ENSPNAG00000008360	gpkow	60	54.777	Pygocentrus_nattereri
ENSLACG00000003399	gpkow	91	49.237	ENSRNOG00000022939	Gpkow	54	48.473	Rattus_norvegicus
ENSLACG00000003399	gpkow	91	51.793	ENSRBIG00000027885	GPKOW	55	51.793	Rhinopithecus_bieti
ENSLACG00000003399	gpkow	91	51.793	ENSRROG00000037604	GPKOW	53	51.793	Rhinopithecus_roxellana
ENSLACG00000003399	gpkow	91	52.778	ENSSBOG00000032042	-	52	52.400	Saimiri_boliviensis_boliviensis
ENSLACG00000003399	gpkow	69	42.857	ENSSHAG00000004719	-	69	42.553	Sarcophilus_harrisii
ENSLACG00000003399	gpkow	100	57.860	ENSSFOG00015009901	gpkow	58	57.525	Scleropages_formosus
ENSLACG00000003399	gpkow	99	56.522	ENSSMAG00000013323	gpkow	59	55.298	Scophthalmus_maximus
ENSLACG00000003399	gpkow	99	58.170	ENSSDUG00000023134	gpkow	59	57.947	Seriola_dumerili
ENSLACG00000003399	gpkow	99	59.667	ENSSLDG00000024756	gpkow	59	54.636	Seriola_lalandi_dorsalis
ENSLACG00000003399	gpkow	91	53.640	ENSSARG00000003351	GPKOW	59	53.937	Sorex_araneus
ENSLACG00000003399	gpkow	99	59.184	ENSSPAG00000015503	gpkow	59	58.784	Stegastes_partitus
ENSLACG00000003399	gpkow	91	51.163	ENSSSCG00000012291	GPKOW	54	51.163	Sus_scrofa
ENSLACG00000003399	gpkow	100	54.266	ENSTRUG00000000616	gpkow	58	53.584	Takifugu_rubripes
ENSLACG00000003399	gpkow	100	56.294	ENSTNIG00000012502	gpkow	59	56.383	Tetraodon_nigroviridis
ENSLACG00000003399	gpkow	91	50.199	ENSTBEG00000004087	GPKOW	52	50.199	Tupaia_belangeri
ENSLACG00000003399	gpkow	91	52.191	ENSTTRG00000008579	GPKOW	53	52.191	Tursiops_truncatus
ENSLACG00000003399	gpkow	91	51.321	ENSUAMG00000026502	GPKOW	59	50.943	Ursus_americanus
ENSLACG00000003399	gpkow	91	51.698	ENSUMAG00000007072	GPKOW	51	51.321	Ursus_maritimus
ENSLACG00000003399	gpkow	91	49.811	ENSVVUG00000017815	GPKOW	53	50.000	Vulpes_vulpes
ENSLACG00000003399	gpkow	100	56.597	ENSXETG00000007727	gpkow	60	56.055	Xenopus_tropicalis
ENSLACG00000003399	gpkow	99	59.396	ENSXCOG00000014306	gpkow	58	59.184	Xiphophorus_couchianus
ENSLACG00000003399	gpkow	99	58.667	ENSXMAG00000018216	gpkow	57	58.844	Xiphophorus_maculatus