EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000003434 (Gene tree)
Gene ID: 102351823
Gene Symbol: PRPF19
Alias: NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 17352 bases
Position: chrJH129400.1:83592-100943
Accession: 102351823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000003857	Prp19	PF08606.11	2.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000003892	PRPF19-201	3021	XM_006011647	ENSLACP00000003857	504 (aa)	XP_006011709	H3A2I6

Gene Model

Click here to download ENSLACG00000003434's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG
lcm04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000003434	PRPF19	56	31.206	ENSLACG00000018788	POC1A	82	31.206

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003434	PRPF19	100	90.079	ENSG00000110107	PRPF19	100	90.385	Homo_sapiens
ENSLACG00000003434	PRPF19	100	85.743	ENSAPOG00000017823	prpf19	100	85.743	Acanthochromis_polyacanthus
ENSLACG00000003434	PRPF19	100	89.940	ENSAMEG00000007375	PRPF19	99	89.940	Ailuropoda_melanoleuca
ENSLACG00000003434	PRPF19	99	84.493	ENSACIG00000015876	prpf19	99	84.493	Amphilophus_citrinellus
ENSLACG00000003434	PRPF19	100	85.743	ENSAOCG00000020444	prpf19	100	85.743	Amphiprion_ocellaris
ENSLACG00000003434	PRPF19	100	85.743	ENSAPEG00000016076	prpf19	100	85.743	Amphiprion_percula
ENSLACG00000003434	PRPF19	100	85.545	ENSATEG00000008840	prpf19	100	85.545	Anabas_testudineus
ENSLACG00000003434	PRPF19	100	89.881	ENSACAG00000017797	PRPF19	100	89.881	Anolis_carolinensis
ENSLACG00000003434	PRPF19	100	90.278	ENSANAG00000021762	PRPF19	100	90.278	Aotus_nancymaae
ENSLACG00000003434	PRPF19	100	85.149	ENSACLG00000009416	prpf19	100	85.149	Astatotilapia_calliptera
ENSLACG00000003434	PRPF19	100	84.752	ENSAMXG00000011547	prpf19	100	84.752	Astyanax_mexicanus
ENSLACG00000003434	PRPF19	100	89.881	ENSBTAG00000014366	PRPF19	100	89.881	Bos_taurus
ENSLACG00000003434	PRPF19	100	51.670	WBGene00020423	prp-19	100	51.670	Caenorhabditis_elegans
ENSLACG00000003434	PRPF19	100	90.079	ENSCJAG00000016509	PRPF19	100	90.079	Callithrix_jacchus
ENSLACG00000003434	PRPF19	100	89.881	ENSCAFG00000016438	PRPF19	98	89.881	Canis_familiaris
ENSLACG00000003434	PRPF19	60	30.328	ENSCAFG00020013444	WDR36	52	30.328	Canis_lupus_dingo
ENSLACG00000003434	PRPF19	100	89.881	ENSCAFG00020012565	PRPF19	100	89.881	Canis_lupus_dingo
ENSLACG00000003434	PRPF19	100	89.881	ENSCHIG00000018281	PRPF19	100	89.881	Capra_hircus
ENSLACG00000003434	PRPF19	99	89.759	ENSTSYG00000006860	PRPF19	99	89.759	Carlito_syrichta
ENSLACG00000003434	PRPF19	99	89.980	ENSCAPG00000016225	PRPF19	100	89.980	Cavia_aperea
ENSLACG00000003434	PRPF19	100	90.278	ENSCPOG00000020688	PRPF19	100	90.278	Cavia_porcellus
ENSLACG00000003434	PRPF19	100	90.079	ENSCCAG00000025839	PRPF19	100	90.079	Cebus_capucinus
ENSLACG00000003434	PRPF19	100	90.079	ENSCATG00000041921	PRPF19	100	90.079	Cercocebus_atys
ENSLACG00000003434	PRPF19	99	90.342	ENSCLAG00000003338	PRPF19	100	90.342	Chinchilla_lanigera
ENSLACG00000003434	PRPF19	100	90.079	ENSCSAG00000006254	PRPF19	100	90.079	Chlorocebus_sabaeus
ENSLACG00000003434	PRPF19	62	79.421	ENSCHOG00000005840	PRPF19	100	79.421	Choloepus_hoffmanni
ENSLACG00000003434	PRPF19	100	89.619	ENSCPBG00000027061	PRPF19	100	89.286	Chrysemys_picta_bellii
ENSLACG00000003434	PRPF19	99	68.807	ENSCING00000016625	-	99	68.807	Ciona_intestinalis
ENSLACG00000003434	PRPF19	99	70.659	ENSCSAVG00000002027	-	99	69.643	Ciona_savignyi
ENSLACG00000003434	PRPF19	99	90.850	ENSCANG00000027155	PRPF19	99	42.610	Colobus_angolensis_palliatus
ENSLACG00000003434	PRPF19	100	89.881	ENSCGRG00001002699	Prpf19	100	89.881	Cricetulus_griseus_chok1gshd
ENSLACG00000003434	PRPF19	100	89.286	ENSCGRG00000008964	Prpf19	100	89.286	Cricetulus_griseus_crigri
ENSLACG00000003434	PRPF19	100	85.347	ENSCSEG00000010411	prpf19	100	85.347	Cynoglossus_semilaevis
ENSLACG00000003434	PRPF19	100	83.762	ENSCVAG00000012011	prpf19	100	83.762	Cyprinodon_variegatus
ENSLACG00000003434	PRPF19	100	84.158	ENSDARG00000015239	prpf19	100	84.158	Danio_rerio
ENSLACG00000003434	PRPF19	100	90.079	ENSDNOG00000005797	PRPF19	100	90.079	Dasypus_novemcinctus
ENSLACG00000003434	PRPF19	100	90.079	ENSDORG00000006906	Prpf19	100	90.079	Dipodomys_ordii
ENSLACG00000003434	PRPF19	100	66.535	FBgn0261119	Prp19	99	66.535	Drosophila_melanogaster
ENSLACG00000003434	PRPF19	100	78.571	ENSETEG00000012295	PRPF19	100	78.571	Echinops_telfairi
ENSLACG00000003434	PRPF19	83	76.905	ENSEBUG00000013075	prpf19	100	76.905	Eptatretus_burgeri
ENSLACG00000003434	PRPF19	100	89.706	ENSEASG00005008056	PRPF19	98	89.706	Equus_asinus_asinus
ENSLACG00000003434	PRPF19	100	89.683	ENSECAG00000007322	PRPF19	100	89.683	Equus_caballus
ENSLACG00000003434	PRPF19	100	83.929	ENSELUG00000020276	-	100	83.929	Esox_lucius
ENSLACG00000003434	PRPF19	100	78.175	ENSELUG00000004578	prpf19	100	78.175	Esox_lucius
ENSLACG00000003434	PRPF19	100	89.881	ENSFCAG00000013668	PRPF19	100	89.881	Felis_catus
ENSLACG00000003434	PRPF19	100	89.286	ENSFALG00000012084	PRPF19	100	89.286	Ficedula_albicollis
ENSLACG00000003434	PRPF19	84	90.047	ENSFDAG00000009420	PRPF19	96	90.047	Fukomys_damarensis
ENSLACG00000003434	PRPF19	100	84.554	ENSFHEG00000022135	prpf19	100	84.554	Fundulus_heteroclitus
ENSLACG00000003434	PRPF19	100	86.139	ENSGMOG00000014756	prpf19	100	86.139	Gadus_morhua
ENSLACG00000003434	PRPF19	100	89.484	ENSGALG00000036530	PRPF19	100	89.484	Gallus_gallus
ENSLACG00000003434	PRPF19	100	83.366	ENSGAFG00000008931	prpf19	100	83.366	Gambusia_affinis
ENSLACG00000003434	PRPF19	100	84.554	ENSGACG00000017976	prpf19	100	84.554	Gasterosteus_aculeatus
ENSLACG00000003434	PRPF19	100	89.484	ENSGAGG00000013328	PRPF19	100	89.484	Gopherus_agassizii
ENSLACG00000003434	PRPF19	100	90.079	ENSGGOG00000008648	PRPF19	100	90.079	Gorilla_gorilla
ENSLACG00000003434	PRPF19	100	85.149	ENSHBUG00000008394	prpf19	100	85.149	Haplochromis_burtoni
ENSLACG00000003434	PRPF19	100	90.278	ENSHGLG00000003934	PRPF19	100	90.278	Heterocephalus_glaber_female
ENSLACG00000003434	PRPF19	99	74.224	ENSHGLG00100010649	PRPF19	100	73.441	Heterocephalus_glaber_male
ENSLACG00000003434	PRPF19	100	83.762	ENSHCOG00000016720	prpf19	100	83.762	Hippocampus_comes
ENSLACG00000003434	PRPF19	100	84.752	ENSIPUG00000013084	prpf19	100	84.752	Ictalurus_punctatus
ENSLACG00000003434	PRPF19	100	89.881	ENSSTOG00000001598	PRPF19	100	89.881	Ictidomys_tridecemlineatus
ENSLACG00000003434	PRPF19	100	89.683	ENSJJAG00000020609	Prpf19	100	89.683	Jaculus_jaculus
ENSLACG00000003434	PRPF19	100	84.554	ENSKMAG00000010257	prpf19	100	84.554	Kryptolebias_marmoratus
ENSLACG00000003434	PRPF19	100	84.752	ENSLBEG00000027436	prpf19	100	84.752	Labrus_bergylta
ENSLACG00000003434	PRPF19	91	72.708	ENSLOCG00000008123	prpf19	100	72.863	Lepisosteus_oculatus
ENSLACG00000003434	PRPF19	100	86.756	ENSLAFG00000002644	PRPF19	100	86.756	Loxodonta_africana
ENSLACG00000003434	PRPF19	100	90.079	ENSMFAG00000036743	PRPF19	100	90.079	Macaca_fascicularis
ENSLACG00000003434	PRPF19	100	90.079	ENSMMUG00000014530	PRPF19	100	90.079	Macaca_mulatta
ENSLACG00000003434	PRPF19	100	90.079	ENSMNEG00000044485	PRPF19	100	90.079	Macaca_nemestrina
ENSLACG00000003434	PRPF19	61	30.328	ENSMLEG00000041259	WDR36	50	30.328	Mandrillus_leucophaeus
ENSLACG00000003434	PRPF19	100	90.079	ENSMLEG00000043312	PRPF19	100	90.079	Mandrillus_leucophaeus
ENSLACG00000003434	PRPF19	100	84.950	ENSMAMG00000006843	prpf19	100	84.950	Mastacembelus_armatus
ENSLACG00000003434	PRPF19	100	85.149	ENSMZEG00005013356	prpf19	100	85.149	Maylandia_zebra
ENSLACG00000003434	PRPF19	98	83.367	ENSMGAG00000003180	PRPF19	100	83.367	Meleagris_gallopavo
ENSLACG00000003434	PRPF19	100	89.087	ENSMAUG00000012585	Prpf19	100	89.087	Mesocricetus_auratus
ENSLACG00000003434	PRPF19	100	90.079	ENSMICG00000011236	PRPF19	100	90.079	Microcebus_murinus
ENSLACG00000003434	PRPF19	100	89.881	ENSMOCG00000010383	Prpf19	100	89.881	Microtus_ochrogaster
ENSLACG00000003434	PRPF19	100	84.325	ENSMMOG00000003138	prpf19	100	84.325	Mola_mola
ENSLACG00000003434	PRPF19	100	90.278	ENSMODG00000020338	PRPF19	100	90.278	Monodelphis_domestica
ENSLACG00000003434	PRPF19	99	77.778	ENSMALG00000010981	prpf19	99	77.778	Monopterus_albus
ENSLACG00000003434	PRPF19	100	89.881	MGP_CAROLIEiJ_G0022704	Prpf19	100	89.881	Mus_caroli
ENSLACG00000003434	PRPF19	100	89.881	ENSMUSG00000024735	Prpf19	100	89.881	Mus_musculus
ENSLACG00000003434	PRPF19	100	89.881	MGP_PahariEiJ_G0014198	Prpf19	100	89.881	Mus_pahari
ENSLACG00000003434	PRPF19	100	89.881	MGP_SPRETEiJ_G0023618	Prpf19	100	89.881	Mus_spretus
ENSLACG00000003434	PRPF19	100	89.881	ENSMPUG00000014432	PRPF19	100	89.881	Mustela_putorius_furo
ENSLACG00000003434	PRPF19	100	87.091	ENSMLUG00000017597	PRPF19	100	87.091	Myotis_lucifugus
ENSLACG00000003434	PRPF19	100	89.683	ENSNGAG00000012671	Prpf19	100	89.683	Nannospalax_galili
ENSLACG00000003434	PRPF19	100	84.950	ENSNBRG00000000055	prpf19	100	84.950	Neolamprologus_brichardi
ENSLACG00000003434	PRPF19	100	90.079	ENSNLEG00000013618	PRPF19	100	90.079	Nomascus_leucogenys
ENSLACG00000003434	PRPF19	99	86.720	ENSOPRG00000008630	PRPF19	100	86.720	Ochotona_princeps
ENSLACG00000003434	PRPF19	100	90.278	ENSODEG00000004043	PRPF19	100	90.278	Octodon_degus
ENSLACG00000003434	PRPF19	100	84.950	ENSONIG00000004880	prpf19	100	84.950	Oreochromis_niloticus
ENSLACG00000003434	PRPF19	100	86.476	ENSOCUG00000015689	PRPF19	100	86.476	Oryctolagus_cuniculus
ENSLACG00000003434	PRPF19	100	84.752	ENSORLG00000004666	prpf19	100	84.752	Oryzias_latipes
ENSLACG00000003434	PRPF19	100	84.752	ENSORLG00020013561	prpf19	100	84.752	Oryzias_latipes_hni
ENSLACG00000003434	PRPF19	100	84.752	ENSORLG00015022196	prpf19	100	84.752	Oryzias_latipes_hsok
ENSLACG00000003434	PRPF19	100	83.960	ENSOMEG00000004424	prpf19	100	83.960	Oryzias_melastigma
ENSLACG00000003434	PRPF19	100	89.881	ENSOGAG00000016756	PRPF19	100	89.881	Otolemur_garnettii
ENSLACG00000003434	PRPF19	100	89.881	ENSOARG00000015596	PRPF19	100	89.881	Ovis_aries
ENSLACG00000003434	PRPF19	99	88.409	ENSPPAG00000030246	PRPF19	100	88.409	Pan_paniscus
ENSLACG00000003434	PRPF19	100	89.881	ENSPPRG00000002470	PRPF19	100	89.881	Panthera_pardus
ENSLACG00000003434	PRPF19	99	89.940	ENSPTIG00000006541	PRPF19	99	89.940	Panthera_tigris_altaica
ENSLACG00000003434	PRPF19	100	90.079	ENSPTRG00000003724	PRPF19	100	90.079	Pan_troglodytes
ENSLACG00000003434	PRPF19	100	90.079	ENSPANG00000002762	PRPF19	100	90.079	Papio_anubis
ENSLACG00000003434	PRPF19	100	84.356	ENSPKIG00000019715	prpf19	100	84.356	Paramormyrops_kingsleyae
ENSLACG00000003434	PRPF19	83	89.021	ENSPSIG00000007497	PRPF19	100	89.021	Pelodiscus_sinensis
ENSLACG00000003434	PRPF19	100	85.516	ENSPMGG00000017527	prpf19	100	85.516	Periophthalmus_magnuspinnatus
ENSLACG00000003434	PRPF19	100	89.087	ENSPEMG00000019270	Prpf19	100	89.087	Peromyscus_maniculatus_bairdii
ENSLACG00000003434	PRPF19	99	90.364	ENSPCIG00000003485	PRPF19	79	90.364	Phascolarctos_cinereus
ENSLACG00000003434	PRPF19	100	83.564	ENSPFOG00000002558	prpf19	100	83.564	Poecilia_formosa
ENSLACG00000003434	PRPF19	100	83.564	ENSPLAG00000017942	prpf19	100	83.564	Poecilia_latipinna
ENSLACG00000003434	PRPF19	100	83.564	ENSPMEG00000008638	prpf19	100	83.564	Poecilia_mexicana
ENSLACG00000003434	PRPF19	100	85.909	ENSPREG00000002489	prpf19	96	85.909	Poecilia_reticulata
ENSLACG00000003434	PRPF19	100	90.126	ENSPPYG00000003202	PRPF19	91	90.126	Pongo_abelii
ENSLACG00000003434	PRPF19	100	89.881	ENSPCAG00000001930	PRPF19	100	89.881	Procavia_capensis
ENSLACG00000003434	PRPF19	100	90.466	ENSPCOG00000014017	PRPF19	100	90.466	Propithecus_coquereli
ENSLACG00000003434	PRPF19	100	89.683	ENSPVAG00000014669	PRPF19	100	89.683	Pteropus_vampyrus
ENSLACG00000003434	PRPF19	100	85.149	ENSPNYG00000000859	prpf19	100	85.149	Pundamilia_nyererei
ENSLACG00000003434	PRPF19	100	85.347	ENSPNAG00000019245	prpf19	100	85.347	Pygocentrus_nattereri
ENSLACG00000003434	PRPF19	100	89.881	ENSRNOG00000020897	Prpf19	100	89.881	Rattus_norvegicus
ENSLACG00000003434	PRPF19	100	90.079	ENSRBIG00000036672	PRPF19	100	90.079	Rhinopithecus_bieti
ENSLACG00000003434	PRPF19	100	90.079	ENSRROG00000041572	PRPF19	100	90.079	Rhinopithecus_roxellana
ENSLACG00000003434	PRPF19	100	90.079	ENSSBOG00000022840	PRPF19	100	90.079	Saimiri_boliviensis_boliviensis
ENSLACG00000003434	PRPF19	100	90.079	ENSSHAG00000009462	PRPF19	100	90.079	Sarcophilus_harrisii
ENSLACG00000003434	PRPF19	100	84.127	ENSSFOG00015001236	prpf19	100	84.127	Scleropages_formosus
ENSLACG00000003434	PRPF19	100	85.149	ENSSMAG00000002273	prpf19	100	85.149	Scophthalmus_maximus
ENSLACG00000003434	PRPF19	100	85.347	ENSSDUG00000003299	prpf19	100	85.347	Seriola_dumerili
ENSLACG00000003434	PRPF19	100	85.347	ENSSLDG00000003019	prpf19	100	85.347	Seriola_lalandi_dorsalis
ENSLACG00000003434	PRPF19	100	88.690	ENSSPUG00000019328	PRPF19	100	88.690	Sphenodon_punctatus
ENSLACG00000003434	PRPF19	100	85.545	ENSSPAG00000008546	prpf19	100	85.545	Stegastes_partitus
ENSLACG00000003434	PRPF19	100	89.683	ENSSSCG00000013107	PRPF19	100	89.683	Sus_scrofa
ENSLACG00000003434	PRPF19	100	89.683	ENSTGUG00000006319	PRPF19	100	89.683	Taeniopygia_guttata
ENSLACG00000003434	PRPF19	100	84.554	ENSTRUG00000008502	prpf19	100	84.554	Takifugu_rubripes
ENSLACG00000003434	PRPF19	100	68.317	ENSTNIG00000014219	prpf19	100	68.317	Tetraodon_nigroviridis
ENSLACG00000003434	PRPF19	100	89.484	ENSTTRG00000012476	PRPF19	100	89.484	Tursiops_truncatus
ENSLACG00000003434	PRPF19	100	89.881	ENSUAMG00000011280	PRPF19	100	89.881	Ursus_americanus
ENSLACG00000003434	PRPF19	60	30.328	ENSUMAG00000015661	WDR36	51	30.328	Ursus_maritimus
ENSLACG00000003434	PRPF19	84	89.100	ENSUMAG00000011609	PRPF19	83	89.100	Ursus_maritimus
ENSLACG00000003434	PRPF19	99	89.427	ENSVPAG00000010516	PRPF19	100	89.427	Vicugna_pacos
ENSLACG00000003434	PRPF19	100	89.881	ENSVVUG00000005291	PRPF19	100	89.881	Vulpes_vulpes
ENSLACG00000003434	PRPF19	60	30.328	ENSVVUG00000012684	WDR36	52	30.328	Vulpes_vulpes
ENSLACG00000003434	PRPF19	100	83.144	ENSXETG00000011938	prpf19	100	83.144	Xenopus_tropicalis
ENSLACG00000003434	PRPF19	100	83.564	ENSXCOG00000003141	prpf19	100	83.564	Xiphophorus_couchianus
ENSLACG00000003434	PRPF19	100	83.762	ENSXMAG00000008485	prpf19	100	83.762	Xiphophorus_maculatus