EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000003556 (Gene tree)
Gene ID: 102354875
Gene Symbol: SALL1
Alias: Hsal1|TBS|ZNF794
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 16857 bases
Position: chrJH127347.1:87528-104384
Accession: 102354875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000003993	zf-C2H2	PF00096.26	8.1e-34	1	6
ENSLACP00000003993	zf-C2H2	PF00096.26	8.1e-34	2	6
ENSLACP00000003993	zf-C2H2	PF00096.26	8.1e-34	3	6
ENSLACP00000003993	zf-C2H2	PF00096.26	8.1e-34	4	6
ENSLACP00000003993	zf-C2H2	PF00096.26	8.1e-34	5	6
ENSLACP00000003993	zf-C2H2	PF00096.26	8.1e-34	6	6
ENSLACP00000003993	zf-met	PF12874.7	2.9e-24	1	5
ENSLACP00000003993	zf-met	PF12874.7	2.9e-24	2	5
ENSLACP00000003993	zf-met	PF12874.7	2.9e-24	3	5
ENSLACP00000003993	zf-met	PF12874.7	2.9e-24	4	5
ENSLACP00000003993	zf-met	PF12874.7	2.9e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004029	SALL1-201	5229	XM_006002286	ENSLACP00000003993	1306 (aa)	XP_006002348	H3A2X2

Gene Model

Click here to download ENSLACG00000003556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000003556	SALL1	60	41.457	ENSLACG00000014018	-	70	43.595
ENSLACG00000003556	SALL1	97	48.454	ENSLACG00000013898	SALL4	81	48.454
ENSLACG00000003556	SALL1	57	56.863	ENSLACG00000017381	-	98	50.000
ENSLACG00000003556	SALL1	58	49.091	ENSLACG00000014708	-	59	49.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003556	SALL1	99	78.231	ENSG00000103449	SALL1	100	78.510	Homo_sapiens
ENSLACG00000003556	SALL1	100	69.225	ENSAPOG00000022764	sall1a	100	68.971	Acanthochromis_polyacanthus
ENSLACG00000003556	SALL1	99	77.304	ENSAMEG00000006817	SALL1	100	77.542	Ailuropoda_melanoleuca
ENSLACG00000003556	SALL1	100	68.877	ENSACIG00000004231	sall1a	100	68.350	Amphilophus_citrinellus
ENSLACG00000003556	SALL1	100	69.300	ENSAOCG00000002800	sall1a	100	69.046	Amphiprion_ocellaris
ENSLACG00000003556	SALL1	100	69.300	ENSAPEG00000010179	sall1a	100	69.046	Amphiprion_percula
ENSLACG00000003556	SALL1	99	69.127	ENSATEG00000003006	sall1a	100	68.532	Anabas_testudineus
ENSLACG00000003556	SALL1	100	83.193	ENSAPLG00000003356	SALL1	100	83.193	Anas_platyrhynchos
ENSLACG00000003556	SALL1	98	77.709	ENSACAG00000014399	SALL1	96	77.632	Anolis_carolinensis
ENSLACG00000003556	SALL1	99	78.491	ENSANAG00000027238	SALL1	100	78.507	Aotus_nancymaae
ENSLACG00000003556	SALL1	100	69.329	ENSACLG00000017148	sall1a	100	68.726	Astatotilapia_calliptera
ENSLACG00000003556	SALL1	100	69.670	ENSAMXG00000018599	sall1a	100	69.497	Astyanax_mexicanus
ENSLACG00000003556	SALL1	99	52.197	ENSAMXG00000017702	sall1b	99	52.242	Astyanax_mexicanus
ENSLACG00000003556	SALL1	100	77.584	ENSBTAG00000008544	SALL1	100	77.736	Bos_taurus
ENSLACG00000003556	SALL1	99	78.425	ENSCJAG00000001740	SALL1	100	78.669	Callithrix_jacchus
ENSLACG00000003556	SALL1	99	76.946	ENSCAFG00000009755	SALL1	100	77.417	Canis_familiaris
ENSLACG00000003556	SALL1	99	76.946	ENSCAFG00020002842	SALL1	100	77.417	Canis_lupus_dingo
ENSLACG00000003556	SALL1	100	77.373	ENSCHIG00000026074	SALL1	100	77.297	Capra_hircus
ENSLACG00000003556	SALL1	99	79.224	ENSTSYG00000029464	SALL1	100	79.163	Carlito_syrichta
ENSLACG00000003556	SALL1	98	78.460	ENSCPOG00000006564	SALL1	100	78.166	Cavia_porcellus
ENSLACG00000003556	SALL1	99	76.115	ENSCCAG00000001639	SALL1	100	76.360	Cebus_capucinus
ENSLACG00000003556	SALL1	99	78.756	ENSCATG00000004982	SALL1	100	78.848	Cercocebus_atys
ENSLACG00000003556	SALL1	99	78.659	ENSCLAG00000006380	SALL1	100	78.294	Chinchilla_lanigera
ENSLACG00000003556	SALL1	99	77.803	ENSCSAG00000005319	SALL1	100	78.047	Chlorocebus_sabaeus
ENSLACG00000003556	SALL1	64	80.632	ENSCHOG00000000800	-	69	80.632	Choloepus_hoffmanni
ENSLACG00000003556	SALL1	100	82.735	ENSCPBG00000015924	SALL1	100	82.756	Chrysemys_picta_bellii
ENSLACG00000003556	SALL1	99	78.740	ENSCANG00000036664	SALL1	100	79.115	Colobus_angolensis_palliatus
ENSLACG00000003556	SALL1	99	77.011	ENSCGRG00001023314	-	100	76.801	Cricetulus_griseus_chok1gshd
ENSLACG00000003556	SALL1	98	77.012	ENSCGRG00000009496	Sall1	100	76.798	Cricetulus_griseus_crigri
ENSLACG00000003556	SALL1	99	67.640	ENSCSEG00000009349	sall1a	99	68.114	Cynoglossus_semilaevis
ENSLACG00000003556	SALL1	90	67.821	ENSCVAG00000020513	sall1a	99	67.483	Cyprinodon_variegatus
ENSLACG00000003556	SALL1	99	47.187	ENSDARG00000075891	sall1b	69	50.866	Danio_rerio
ENSLACG00000003556	SALL1	100	68.464	ENSDARG00000074319	sall1a	100	68.437	Danio_rerio
ENSLACG00000003556	SALL1	99	78.387	ENSDNOG00000016413	SALL1	100	78.175	Dasypus_novemcinctus
ENSLACG00000003556	SALL1	98	78.227	ENSETEG00000015150	SALL1	100	78.166	Echinops_telfairi
ENSLACG00000003556	SALL1	96	37.110	ENSEBUG00000008798	SALL1	68	42.605	Eptatretus_burgeri
ENSLACG00000003556	SALL1	90	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSLACG00000003556	SALL1	99	78.277	ENSEASG00005014602	SALL1	100	78.370	Equus_asinus_asinus
ENSLACG00000003556	SALL1	91	76.703	ENSECAG00000011334	SALL1	99	76.955	Equus_caballus
ENSLACG00000003556	SALL1	98	77.417	ENSEEUG00000002014	SALL1	100	77.202	Erinaceus_europaeus
ENSLACG00000003556	SALL1	100	51.448	ENSELUG00000017774	-	100	51.488	Esox_lucius
ENSLACG00000003556	SALL1	100	65.932	ENSELUG00000006159	sall1a	100	65.862	Esox_lucius
ENSLACG00000003556	SALL1	99	76.976	ENSFCAG00000024654	SALL1	100	77.238	Felis_catus
ENSLACG00000003556	SALL1	100	82.582	ENSFALG00000000074	SALL1	100	82.582	Ficedula_albicollis
ENSLACG00000003556	SALL1	98	61.538	ENSFHEG00000008424	-	92	61.538	Fundulus_heteroclitus
ENSLACG00000003556	SALL1	100	68.322	ENSFHEG00000012579	sall1a	100	68.021	Fundulus_heteroclitus
ENSLACG00000003556	SALL1	98	42.424	ENSGMOG00000013383	-	71	48.237	Gadus_morhua
ENSLACG00000003556	SALL1	100	67.092	ENSGMOG00000006103	sall1a	100	66.792	Gadus_morhua
ENSLACG00000003556	SALL1	100	82.888	ENSGALG00000039238	SALL1	100	82.888	Gallus_gallus
ENSLACG00000003556	SALL1	100	68.820	ENSGAFG00000009964	sall1a	100	68.520	Gambusia_affinis
ENSLACG00000003556	SALL1	99	67.997	ENSGACG00000016702	sall1a	99	67.620	Gasterosteus_aculeatus
ENSLACG00000003556	SALL1	100	82.277	ENSGAGG00000013979	SALL1	100	82.277	Gopherus_agassizii
ENSLACG00000003556	SALL1	99	78.382	ENSGGOG00000000663	SALL1	100	78.550	Gorilla_gorilla
ENSLACG00000003556	SALL1	100	69.179	ENSHBUG00000022005	sall1a	100	68.576	Haplochromis_burtoni
ENSLACG00000003556	SALL1	99	78.354	ENSHGLG00000004288	-	100	78.294	Heterocephalus_glaber_female
ENSLACG00000003556	SALL1	99	78.354	ENSHGLG00100017496	SALL1	100	78.294	Heterocephalus_glaber_male
ENSLACG00000003556	SALL1	100	66.992	ENSHCOG00000000974	sall1a	100	66.667	Hippocampus_comes
ENSLACG00000003556	SALL1	99	49.887	ENSIPUG00000022928	sall1b	99	50.075	Ictalurus_punctatus
ENSLACG00000003556	SALL1	100	69.115	ENSIPUG00000016265	SALL1	100	69.046	Ictalurus_punctatus
ENSLACG00000003556	SALL1	99	77.736	ENSSTOG00000020885	SALL1	100	77.677	Ictidomys_tridecemlineatus
ENSLACG00000003556	SALL1	100	69.074	ENSKMAG00000016681	sall1a	100	68.849	Kryptolebias_marmoratus
ENSLACG00000003556	SALL1	97	67.852	ENSLBEG00000012207	sall1a	95	67.465	Labrus_bergylta
ENSLACG00000003556	SALL1	100	74.307	ENSLOCG00000007283	sall1b	100	74.007	Lepisosteus_oculatus
ENSLACG00000003556	SALL1	98	78.106	ENSLAFG00000015251	SALL1	100	78.200	Loxodonta_africana
ENSLACG00000003556	SALL1	99	78.593	ENSMFAG00000003298	SALL1	100	78.836	Macaca_fascicularis
ENSLACG00000003556	SALL1	93	78.531	ENSMMUG00000017200	SALL1	100	78.793	Macaca_mulatta
ENSLACG00000003556	SALL1	93	78.385	ENSMNEG00000034770	SALL1	100	78.647	Macaca_nemestrina
ENSLACG00000003556	SALL1	99	78.815	ENSMLEG00000036406	SALL1	100	79.135	Mandrillus_leucophaeus
ENSLACG00000003556	SALL1	99	69.421	ENSMAMG00000004164	sall1a	100	68.689	Mastacembelus_armatus
ENSLACG00000003556	SALL1	100	69.329	ENSMZEG00005006479	sall1a	100	68.726	Maylandia_zebra
ENSLACG00000003556	SALL1	98	82.866	ENSMGAG00000004704	SALL1	100	82.866	Meleagris_gallopavo
ENSLACG00000003556	SALL1	99	77.356	ENSMAUG00000019093	Sall1	100	77.069	Mesocricetus_auratus
ENSLACG00000003556	SALL1	100	77.871	ENSMICG00000036486	SALL1	100	78.023	Microcebus_murinus
ENSLACG00000003556	SALL1	99	68.698	ENSMMOG00000016400	sall1a	99	68.350	Mola_mola
ENSLACG00000003556	SALL1	99	80.825	ENSMODG00000013114	SALL1	99	80.825	Monodelphis_domestica
ENSLACG00000003556	SALL1	99	69.202	ENSMALG00000013400	sall1a	100	68.999	Monopterus_albus
ENSLACG00000003556	SALL1	99	76.568	MGP_CAROLIEiJ_G0031362	Sall1	100	76.417	Mus_caroli
ENSLACG00000003556	SALL1	99	76.417	ENSMUSG00000031665	Sall1	100	76.133	Mus_musculus
ENSLACG00000003556	SALL1	99	76.435	MGP_PahariEiJ_G0022961	Sall1	100	76.000	Mus_pahari
ENSLACG00000003556	SALL1	99	76.568	MGP_SPRETEiJ_G0032480	Sall1	100	76.284	Mus_spretus
ENSLACG00000003556	SALL1	99	76.893	ENSMPUG00000003265	SALL1	96	76.893	Mustela_putorius_furo
ENSLACG00000003556	SALL1	98	72.657	ENSMLUG00000015541	SALL1	100	73.579	Myotis_lucifugus
ENSLACG00000003556	SALL1	100	69.254	ENSNBRG00000009307	sall1a	100	68.651	Neolamprologus_brichardi
ENSLACG00000003556	SALL1	93	84.916	ENSNLEG00000001008	SALL1	99	84.444	Nomascus_leucogenys
ENSLACG00000003556	SALL1	99	80.901	ENSMEUG00000012206	SALL1	99	80.672	Notamacropus_eugenii
ENSLACG00000003556	SALL1	77	83.208	ENSOPRG00000005645	SALL1	72	83.084	Ochotona_princeps
ENSLACG00000003556	SALL1	99	78.354	ENSODEG00000003685	SALL1	100	78.218	Octodon_degus
ENSLACG00000003556	SALL1	100	69.103	ENSONIG00000002831	sall1a	100	68.500	Oreochromis_niloticus
ENSLACG00000003556	SALL1	89	81.439	ENSOANG00000013399	SALL1	96	81.439	Ornithorhynchus_anatinus
ENSLACG00000003556	SALL1	100	68.774	ENSORLG00000013827	sall1a	100	68.740	Oryzias_latipes
ENSLACG00000003556	SALL1	100	68.698	ENSORLG00020020570	sall1a	100	68.473	Oryzias_latipes_hni
ENSLACG00000003556	SALL1	100	68.774	ENSORLG00015018830	sall1a	100	68.740	Oryzias_latipes_hsok
ENSLACG00000003556	SALL1	100	68.698	ENSOMEG00000016043	sall1a	100	68.548	Oryzias_melastigma
ENSLACG00000003556	SALL1	99	78.056	ENSOGAG00000027316	SALL1	100	77.997	Otolemur_garnettii
ENSLACG00000003556	SALL1	100	72.542	ENSOARG00000017583	SALL1	100	73.071	Ovis_aries
ENSLACG00000003556	SALL1	98	78.489	ENSPPAG00000035657	SALL1	100	78.582	Pan_paniscus
ENSLACG00000003556	SALL1	98	58.637	ENSPPAG00000035136	-	99	59.489	Pan_paniscus
ENSLACG00000003556	SALL1	100	76.614	ENSPPRG00000023283	SALL1	100	76.935	Panthera_pardus
ENSLACG00000003556	SALL1	80	84.291	ENSPTIG00000013539	-	95	84.291	Panthera_tigris_altaica
ENSLACG00000003556	SALL1	96	59.586	ENSPTRG00000045256	-	97	60.461	Pan_troglodytes
ENSLACG00000003556	SALL1	99	78.409	ENSPTRG00000008108	SALL1	100	78.653	Pan_troglodytes
ENSLACG00000003556	SALL1	99	78.815	ENSPANG00000024176	SALL1	100	79.135	Papio_anubis
ENSLACG00000003556	SALL1	100	66.489	ENSPKIG00000005383	-	100	66.489	Paramormyrops_kingsleyae
ENSLACG00000003556	SALL1	100	66.465	ENSPKIG00000022251	sall1a	100	66.616	Paramormyrops_kingsleyae
ENSLACG00000003556	SALL1	100	82.506	ENSPSIG00000008582	SALL1	100	82.506	Pelodiscus_sinensis
ENSLACG00000003556	SALL1	99	65.422	ENSPMGG00000021788	sall1a	100	65.823	Periophthalmus_magnuspinnatus
ENSLACG00000003556	SALL1	99	49.963	ENSPMAG00000008148	sall1b	98	49.925	Petromyzon_marinus
ENSLACG00000003556	SALL1	99	80.825	ENSPCIG00000017840	SALL1	99	80.672	Phascolarctos_cinereus
ENSLACG00000003556	SALL1	98	68.241	ENSPFOG00000015799	sall1a	96	67.936	Poecilia_formosa
ENSLACG00000003556	SALL1	100	68.460	ENSPLAG00000022539	sall1a	100	68.161	Poecilia_latipinna
ENSLACG00000003556	SALL1	100	68.759	ENSPMEG00000020894	sall1a	100	68.460	Poecilia_mexicana
ENSLACG00000003556	SALL1	100	68.896	ENSPREG00000006802	sall1a	100	68.595	Poecilia_reticulata
ENSLACG00000003556	SALL1	90	78.080	ENSPPYG00000007345	SALL1	95	78.335	Pongo_abelii
ENSLACG00000003556	SALL1	85	80.247	ENSPCAG00000008162	SALL1	93	80.247	Procavia_capensis
ENSLACG00000003556	SALL1	99	78.311	ENSPCOG00000028192	SALL1	100	78.555	Propithecus_coquereli
ENSLACG00000003556	SALL1	69	78.972	ENSPVAG00000015374	SALL1	100	78.813	Pteropus_vampyrus
ENSLACG00000003556	SALL1	100	69.254	ENSPNYG00000010865	sall1a	100	68.651	Pundamilia_nyererei
ENSLACG00000003556	SALL1	73	63.462	ENSPNAG00000028248	-	68	63.462	Pygocentrus_nattereri
ENSLACG00000003556	SALL1	100	67.393	ENSPNAG00000023644	sall1a	100	67.092	Pygocentrus_nattereri
ENSLACG00000003556	SALL1	99	52.158	ENSPNAG00000007442	sall1b	99	52.388	Pygocentrus_nattereri
ENSLACG00000003556	SALL1	100	76.993	ENSRNOG00000013907	Sall1	100	77.069	Rattus_norvegicus
ENSLACG00000003556	SALL1	93	78.414	ENSRBIG00000015707	SALL1	100	78.676	Rhinopithecus_bieti
ENSLACG00000003556	SALL1	98	78.308	ENSRROG00000035777	SALL1	100	78.694	Rhinopithecus_roxellana
ENSLACG00000003556	SALL1	99	78.442	ENSSBOG00000032186	SALL1	100	78.523	Saimiri_boliviensis_boliviensis
ENSLACG00000003556	SALL1	99	80.275	ENSSHAG00000009477	SALL1	99	79.893	Sarcophilus_harrisii
ENSLACG00000003556	SALL1	100	67.549	ENSSFOG00015020020	sall1a	100	67.776	Scleropages_formosus
ENSLACG00000003556	SALL1	98	66.641	ENSSFOG00015001590	sall1a	99	67.025	Scleropages_formosus
ENSLACG00000003556	SALL1	99	69.051	ENSSMAG00000009160	sall1a	99	68.750	Scophthalmus_maximus
ENSLACG00000003556	SALL1	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSLACG00000003556	SALL1	99	69.654	ENSSDUG00000006507	sall1a	99	69.503	Seriola_dumerili
ENSLACG00000003556	SALL1	52	89.394	ENSSLDG00000014465	-	83	89.394	Seriola_lalandi_dorsalis
ENSLACG00000003556	SALL1	99	69.654	ENSSLDG00000017721	sall1a	99	69.503	Seriola_lalandi_dorsalis
ENSLACG00000003556	SALL1	98	77.916	ENSSARG00000000661	SALL1	99	77.855	Sorex_araneus
ENSLACG00000003556	SALL1	100	81.895	ENSSPUG00000000156	SALL1	100	81.895	Sphenodon_punctatus
ENSLACG00000003556	SALL1	100	68.736	ENSSPAG00000021615	sall1a	100	68.484	Stegastes_partitus
ENSLACG00000003556	SALL1	99	76.755	ENSSSCG00000002836	SALL1	100	77.526	Sus_scrofa
ENSLACG00000003556	SALL1	100	82.735	ENSTGUG00000007514	SALL1	100	82.735	Taeniopygia_guttata
ENSLACG00000003556	SALL1	91	67.519	ENSTRUG00000008950	sall1a	100	67.354	Takifugu_rubripes
ENSLACG00000003556	SALL1	92	66.393	ENSTNIG00000004257	sall1a	100	66.393	Tetraodon_nigroviridis
ENSLACG00000003556	SALL1	72	79.452	ENSTBEG00000002119	-	53	79.452	Tupaia_belangeri
ENSLACG00000003556	SALL1	90	77.257	ENSUAMG00000023379	-	92	77.419	Ursus_americanus
ENSLACG00000003556	SALL1	90	75.973	ENSVVUG00000019383	-	99	76.734	Vulpes_vulpes
ENSLACG00000003556	SALL1	100	73.661	ENSXETG00000018417	sall1	100	73.810	Xenopus_tropicalis
ENSLACG00000003556	SALL1	98	35.545	ENSXETG00000017176	sall2	68	40.226	Xenopus_tropicalis
ENSLACG00000003556	SALL1	100	68.820	ENSXMAG00000016273	sall1a	100	68.520	Xiphophorus_maculatus