EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000003646 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 5931 bases
Position: chrJH128538.1:90947-96877
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004103	RVT_1	PF00078.27	5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004139	-	2040	-	ENSLACP00000004103	680 (aa)	-	H3A382

Gene Model

Click here to download ENSLACG00000003646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000003646	-	59	34.135	ENSLACG00000004055	-	57	34.135
ENSLACG00000003646	-	55	33.753	ENSLACG00000003785	-	60	33.753
ENSLACG00000003646	-	81	30.584	ENSLACG00000006186	-	72	30.584
ENSLACG00000003646	-	92	34.375	ENSLACG00000013588	-	91	34.375
ENSLACG00000003646	-	92	34.109	ENSLACG00000014320	-	98	34.109
ENSLACG00000003646	-	57	31.830	ENSLACG00000009237	-	99	31.830

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003646	-	57	33.810	ENSAMXG00000036492	-	88	33.810	Astyanax_mexicanus
ENSLACG00000003646	-	56	33.170	ENSBTAG00000050622	-	97	33.170	Bos_taurus
ENSLACG00000003646	-	62	34.157	ENSBTAG00000054421	-	99	34.157	Bos_taurus
ENSLACG00000003646	-	52	34.140	ENSBTAG00000049792	-	99	34.140	Bos_taurus
ENSLACG00000003646	-	68	31.743	ENSBTAG00000051290	-	93	31.008	Bos_taurus
ENSLACG00000003646	-	59	35.225	ENSBTAG00000048394	-	99	33.987	Bos_taurus
ENSLACG00000003646	-	58	35.663	ENSBTAG00000049470	-	98	35.663	Bos_taurus
ENSLACG00000003646	-	68	32.784	ENSBTAG00000050874	-	99	32.784	Bos_taurus
ENSLACG00000003646	-	64	35.637	ENSBTAG00000055274	-	90	35.637	Bos_taurus
ENSLACG00000003646	-	62	34.004	ENSBTAG00000053778	-	98	34.004	Bos_taurus
ENSLACG00000003646	-	68	34.091	ENSBTAG00000052368	-	97	32.717	Bos_taurus
ENSLACG00000003646	-	51	35.890	ENSBTAG00000054710	-	85	35.890	Bos_taurus
ENSLACG00000003646	-	52	34.973	ENSBTAG00000054286	-	99	34.973	Bos_taurus
ENSLACG00000003646	-	50	37.151	ENSBTAG00000053987	-	98	37.151	Bos_taurus
ENSLACG00000003646	-	55	32.737	ENSBTAG00000048643	-	92	32.732	Bos_taurus
ENSLACG00000003646	-	80	33.624	ENSBTAG00000048962	-	98	33.624	Bos_taurus
ENSLACG00000003646	-	65	35.332	ENSBTAG00000053762	-	95	35.332	Bos_taurus
ENSLACG00000003646	-	58	35.561	ENSBTAG00000052411	-	97	35.561	Bos_taurus
ENSLACG00000003646	-	56	32.398	ENSBTAG00000048533	-	93	32.398	Bos_taurus
ENSLACG00000003646	-	68	34.298	ENSBTAG00000049235	-	96	34.298	Bos_taurus
ENSLACG00000003646	-	61	35.308	ENSBTAG00000051396	-	94	35.308	Bos_taurus
ENSLACG00000003646	-	50	33.515	ENSBTAG00000049971	-	94	33.515	Bos_taurus
ENSLACG00000003646	-	58	33.493	ENSBTAG00000051068	-	99	33.493	Bos_taurus
ENSLACG00000003646	-	68	34.908	ENSBTAG00000048654	-	98	34.908	Bos_taurus
ENSLACG00000003646	-	59	35.225	ENSBTAG00000053939	-	96	33.543	Bos_taurus
ENSLACG00000003646	-	59	36.706	ENSBTAG00000051822	-	96	34.874	Bos_taurus
ENSLACG00000003646	-	56	30.808	ENSBTAG00000048821	-	96	31.818	Bos_taurus
ENSLACG00000003646	-	51	34.358	ENSBTAG00000049887	-	99	34.358	Bos_taurus
ENSLACG00000003646	-	55	33.246	ENSLOCG00000010296	-	96	33.246	Lepisosteus_oculatus
ENSLACG00000003646	-	91	31.768	ENSLOCG00000014143	-	98	31.768	Lepisosteus_oculatus
ENSLACG00000003646	-	96	31.287	ENSLOCG00000011035	-	81	31.287	Lepisosteus_oculatus
ENSLACG00000003646	-	50	32.670	ENSLOCG00000017780	-	97	32.670	Lepisosteus_oculatus
ENSLACG00000003646	-	58	35.539	ENSLOCG00000009450	-	58	35.539	Lepisosteus_oculatus