EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000003722 (Gene tree)
Gene ID: 102367105
Gene Symbol: rabl2
Alias: si:dkeyp-1h4.2
Full Name: RAB%2C member of RAS oncogene family like 2A
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 20673 bases
Position: chrJH129115.1:93808-114480
Accession: 102367105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004187	MMR_HSR1	PF01926.23	9.7e-05	1	1
ENSLACP00000004186	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004222	-	955	XM_006011011	ENSLACP00000004186	224 (aa)	XP_006011073	H3A3G5
ENSLACT00000004223	-	678	-	ENSLACP00000004187	225 (aa)	-	H3A3G6

Gene Model

Click here to download ENSLACG00000003722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003722's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000003722	rabl2	76	32.759	ENSLACG00000006407	RAB30	86	32.759
ENSLACG00000003722	rabl2	67	39.355	ENSLACG00000012869	RAB1A	75	39.355
ENSLACG00000003722	rabl2	69	36.076	ENSLACG00000011181	RAB14	73	36.076
ENSLACG00000003722	rabl2	51	39.024	ENSLACG00000002523	RAB29	58	39.024
ENSLACG00000003722	rabl2	69	30.625	ENSLACG00000016074	RAB39B	75	30.625
ENSLACG00000003722	rabl2	83	32.124	ENSLACG00000013571	RAB33B	83	32.124
ENSLACG00000003722	rabl2	90	34.928	ENSLACG00000011557	zgc:101559	84	34.928
ENSLACG00000003722	rabl2	69	31.646	ENSLACG00000012521	RAB2A	75	31.646
ENSLACG00000003722	rabl2	67	35.256	ENSLACG00000007092	RAB22A	79	35.256
ENSLACG00000003722	rabl2	74	31.638	ENSLACG00000012755	-	83	31.638
ENSLACG00000003722	rabl2	71	34.756	ENSLACG00000010461	RAB12	66	34.756
ENSLACG00000003722	rabl2	67	38.065	ENSLACG00000009310	rab18a	74	38.065
ENSLACG00000003722	rabl2	67	34.641	ENSLACG00000011157	RAB25	71	34.641
ENSLACG00000003722	rabl2	67	35.897	ENSLACG00000012674	si:dkey-34d22.5	74	35.897
ENSLACG00000003722	rabl2	69	32.515	ENSLACG00000017891	RAB9B	77	32.515
ENSLACG00000003722	rabl2	69	36.478	ENSLACG00000011380	rab11al	72	36.478
ENSLACG00000003722	rabl2	61	32.847	ENSLACG00000018793	RAN	93	32.847
ENSLACG00000003722	rabl2	67	40.000	ENSLACG00000012717	RAB1B	76	40.000
ENSLACG00000003722	rabl2	68	32.484	ENSLACG00000008103	-	88	32.484
ENSLACG00000003722	rabl2	67	33.766	ENSLACG00000005168	RAB6A	75	32.903
ENSLACG00000003722	rabl2	63	38.889	ENSLACG00000011256	rab18b	70	38.889
ENSLACG00000003722	rabl2	76	34.615	ENSLACG00000016857	-	79	34.615
ENSLACG00000003722	rabl2	69	35.503	ENSLACG00000015770	RAB7A	81	35.503
ENSLACG00000003722	rabl2	76	33.149	ENSLACG00000008809	zgc:100918	88	33.149
ENSLACG00000003722	rabl2	67	37.179	ENSLACG00000012184	RAB11A	73	37.500
ENSLACG00000003722	rabl2	72	36.364	ENSLACG00000004663	RAB5A	74	36.364
ENSLACG00000003722	rabl2	64	30.921	ENSLACG00000001081	RAB34	59	30.921
ENSLACG00000003722	rabl2	67	32.468	ENSLACG00000013980	rab41	73	32.468
ENSLACG00000003722	rabl2	71	30.675	ENSLACG00000022111	-	82	30.675
ENSLACG00000003722	rabl2	69	31.646	ENSLACG00000014446	RAB2B	96	31.646
ENSLACG00000003722	rabl2	68	36.306	ENSLACG00000016974	RAB11B	91	36.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003722	rabl2	96	78.241	ENSG00000144134	RABL2A	100	80.702	Homo_sapiens
ENSLACG00000003722	rabl2	96	78.241	ENSG00000079974	RABL2B	100	80.808	Homo_sapiens
ENSLACG00000003722	rabl2	95	79.812	ENSAPOG00000023708	rabl2	96	79.812	Acanthochromis_polyacanthus
ENSLACG00000003722	rabl2	94	78.972	ENSAMEG00000003173	-	95	78.972	Ailuropoda_melanoleuca
ENSLACG00000003722	rabl2	95	77.830	ENSACIG00000000670	rabl2	95	77.830	Amphilophus_citrinellus
ENSLACG00000003722	rabl2	95	79.343	ENSAOCG00000008069	rabl2	96	79.343	Amphiprion_ocellaris
ENSLACG00000003722	rabl2	95	79.812	ENSAPEG00000003164	rabl2	96	79.812	Amphiprion_percula
ENSLACG00000003722	rabl2	96	79.907	ENSATEG00000001111	rabl2	96	79.907	Anabas_testudineus
ENSLACG00000003722	rabl2	73	85.976	ENSACAG00000000418	-	93	85.976	Anolis_carolinensis
ENSLACG00000003722	rabl2	97	76.147	ENSANAG00000021001	-	95	76.147	Aotus_nancymaae
ENSLACG00000003722	rabl2	95	79.245	ENSACLG00000025632	rabl2	95	79.245	Astatotilapia_calliptera
ENSLACG00000003722	rabl2	98	82.353	ENSAMXG00000040611	rabl2	99	82.353	Astyanax_mexicanus
ENSLACG00000003722	rabl2	90	81.683	ENSBTAG00000004876	RABL2B	99	76.000	Bos_taurus
ENSLACG00000003722	rabl2	94	79.717	ENSCJAG00000018414	-	93	79.717	Callithrix_jacchus
ENSLACG00000003722	rabl2	99	75.225	ENSCAFG00020006938	-	99	75.225	Canis_lupus_dingo
ENSLACG00000003722	rabl2	90	81.188	ENSCHIG00000000591	-	93	77.674	Capra_hircus
ENSLACG00000003722	rabl2	92	79.227	ENSTSYG00000004323	-	90	79.227	Carlito_syrichta
ENSLACG00000003722	rabl2	94	79.717	ENSCPOG00000026899	-	95	79.717	Cavia_porcellus
ENSLACG00000003722	rabl2	97	77.523	ENSCCAG00000025944	-	95	77.523	Cebus_capucinus
ENSLACG00000003722	rabl2	95	78.972	ENSCATG00000034307	-	93	78.972	Cercocebus_atys
ENSLACG00000003722	rabl2	92	81.951	ENSCLAG00000017218	-	92	81.951	Chinchilla_lanigera
ENSLACG00000003722	rabl2	99	77.477	ENSCSAG00000004698	-	96	77.477	Chlorocebus_sabaeus
ENSLACG00000003722	rabl2	99	79.372	ENSCPBG00000011715	-	98	79.372	Chrysemys_picta_bellii
ENSLACG00000003722	rabl2	86	68.750	ENSCING00000004961	-	90	68.750	Ciona_intestinalis
ENSLACG00000003722	rabl2	86	69.792	ENSCSAVG00000006042	-	92	69.792	Ciona_savignyi
ENSLACG00000003722	rabl2	95	78.037	ENSCANG00000030879	-	93	78.037	Colobus_angolensis_palliatus
ENSLACG00000003722	rabl2	99	75.225	ENSCGRG00001021894	Rabl2	99	75.225	Cricetulus_griseus_chok1gshd
ENSLACG00000003722	rabl2	90	81.683	ENSCSEG00000005479	rabl2	96	78.972	Cynoglossus_semilaevis
ENSLACG00000003722	rabl2	92	81.068	ENSCVAG00000011432	rabl2	94	81.068	Cyprinodon_variegatus
ENSLACG00000003722	rabl2	96	82.791	ENSDARG00000063321	rabl2	97	82.791	Danio_rerio
ENSLACG00000003722	rabl2	99	78.733	ENSDNOG00000035151	-	99	78.733	Dasypus_novemcinctus
ENSLACG00000003722	rabl2	100	76.889	ENSDORG00000000003	Rabl2	100	76.889	Dipodomys_ordii
ENSLACG00000003722	rabl2	94	80.189	ENSEASG00005008239	-	95	80.189	Equus_asinus_asinus
ENSLACG00000003722	rabl2	94	80.189	ENSECAG00000026942	-	95	80.189	Equus_caballus
ENSLACG00000003722	rabl2	92	81.951	ENSFCAG00000033642	-	92	81.951	Felis_catus
ENSLACG00000003722	rabl2	99	75.785	ENSFDAG00000002113	-	100	75.785	Fukomys_damarensis
ENSLACG00000003722	rabl2	100	76.889	ENSFHEG00000015015	rabl2	85	76.889	Fundulus_heteroclitus
ENSLACG00000003722	rabl2	88	80.203	ENSGMOG00000018928	rabl2	100	80.203	Gadus_morhua
ENSLACG00000003722	rabl2	92	79.327	ENSGALG00000032458	RABL2B	92	79.327	Gallus_gallus
ENSLACG00000003722	rabl2	90	80.100	ENSGAFG00000005188	rabl2	96	78.037	Gambusia_affinis
ENSLACG00000003722	rabl2	100	73.333	ENSGACG00000012474	rabl2	100	73.333	Gasterosteus_aculeatus
ENSLACG00000003722	rabl2	95	79.245	ENSHBUG00000010964	rabl2	95	79.245	Haplochromis_burtoni
ENSLACG00000003722	rabl2	99	77.130	ENSHGLG00000005750	-	99	77.130	Heterocephalus_glaber_female
ENSLACG00000003722	rabl2	99	77.130	ENSHGLG00100016281	-	99	77.130	Heterocephalus_glaber_male
ENSLACG00000003722	rabl2	100	76.444	ENSSTOG00000002723	-	100	76.444	Ictidomys_tridecemlineatus
ENSLACG00000003722	rabl2	99	74.775	ENSJJAG00000010792	Rabl2	99	74.775	Jaculus_jaculus
ENSLACG00000003722	rabl2	95	78.873	ENSKMAG00000012723	rabl2	96	78.873	Kryptolebias_marmoratus
ENSLACG00000003722	rabl2	95	78.873	ENSLBEG00000003644	rabl2	96	78.873	Labrus_bergylta
ENSLACG00000003722	rabl2	95	85.849	ENSLOCG00000016767	rabl2	94	85.849	Lepisosteus_oculatus
ENSLACG00000003722	rabl2	95	79.439	ENSMFAG00000044775	-	93	79.439	Macaca_fascicularis
ENSLACG00000003722	rabl2	95	79.439	ENSMMUG00000022914	RABL2B	93	79.439	Macaca_mulatta
ENSLACG00000003722	rabl2	95	78.972	ENSMNEG00000028460	-	93	78.972	Macaca_nemestrina
ENSLACG00000003722	rabl2	95	78.505	ENSMLEG00000032621	-	93	78.505	Mandrillus_leucophaeus
ENSLACG00000003722	rabl2	99	79.730	ENSMAMG00000008168	rabl2	99	79.730	Mastacembelus_armatus
ENSLACG00000003722	rabl2	96	76.636	ENSMZEG00005019758	rabl2	99	76.636	Maylandia_zebra
ENSLACG00000003722	rabl2	96	76.852	ENSMAUG00000010955	Rabl2	96	76.852	Mesocricetus_auratus
ENSLACG00000003722	rabl2	96	78.704	ENSMICG00000031301	-	93	78.704	Microcebus_murinus
ENSLACG00000003722	rabl2	99	74.324	ENSMOCG00000002775	Rabl2	99	74.324	Microtus_ochrogaster
ENSLACG00000003722	rabl2	92	82.039	ENSMODG00000010838	-	94	82.039	Monodelphis_domestica
ENSLACG00000003722	rabl2	99	77.130	ENSMALG00000005944	rabl2	97	77.130	Monopterus_albus
ENSLACG00000003722	rabl2	99	74.324	MGP_CAROLIEiJ_G0020176	Rabl2	98	74.324	Mus_caroli
ENSLACG00000003722	rabl2	99	74.775	ENSMUSG00000022621	Rabl2	99	74.775	Mus_musculus
ENSLACG00000003722	rabl2	96	76.279	MGP_PahariEiJ_G0020181	Rabl2	96	76.279	Mus_pahari
ENSLACG00000003722	rabl2	99	74.775	MGP_SPRETEiJ_G0021073	Rabl2	99	74.775	Mus_spretus
ENSLACG00000003722	rabl2	92	81.463	ENSMPUG00000001806	-	92	81.463	Mustela_putorius_furo
ENSLACG00000003722	rabl2	99	74.324	ENSNGAG00000012843	Rabl2	96	74.324	Nannospalax_galili
ENSLACG00000003722	rabl2	95	79.245	ENSNBRG00000000489	rabl2	95	79.245	Neolamprologus_brichardi
ENSLACG00000003722	rabl2	96	77.778	ENSNLEG00000030435	-	93	77.778	Nomascus_leucogenys
ENSLACG00000003722	rabl2	99	77.376	ENSODEG00000015650	-	97	77.376	Octodon_degus
ENSLACG00000003722	rabl2	95	79.717	ENSONIG00000014885	rabl2	95	79.717	Oreochromis_niloticus
ENSLACG00000003722	rabl2	94	77.251	ENSORLG00000009874	rabl2	93	77.251	Oryzias_latipes
ENSLACG00000003722	rabl2	94	77.251	ENSORLG00020001721	rabl2	93	77.251	Oryzias_latipes_hni
ENSLACG00000003722	rabl2	94	77.251	ENSORLG00015014268	rabl2	93	77.251	Oryzias_latipes_hsok
ENSLACG00000003722	rabl2	94	79.621	ENSOMEG00000008576	rabl2	97	79.621	Oryzias_melastigma
ENSLACG00000003722	rabl2	97	78.899	ENSOGAG00000009123	-	93	78.899	Otolemur_garnettii
ENSLACG00000003722	rabl2	99	76.000	ENSPPRG00000014642	-	99	76.000	Panthera_pardus
ENSLACG00000003722	rabl2	92	81.951	ENSPTIG00000018747	-	92	81.951	Panthera_tigris_altaica
ENSLACG00000003722	rabl2	99	72.727	ENSPTRG00000014555	-	96	72.727	Pan_troglodytes
ENSLACG00000003722	rabl2	99	72.414	ENSPANG00000036121	-	97	72.414	Papio_anubis
ENSLACG00000003722	rabl2	94	85.714	ENSPKIG00000025372	rabl2	94	85.714	Paramormyrops_kingsleyae
ENSLACG00000003722	rabl2	97	81.651	ENSPSIG00000014041	-	96	81.651	Pelodiscus_sinensis
ENSLACG00000003722	rabl2	88	78.173	ENSPMGG00000012946	rabl2	96	78.173	Periophthalmus_magnuspinnatus
ENSLACG00000003722	rabl2	96	76.389	ENSPEMG00000024045	Rabl2	96	76.389	Peromyscus_maniculatus_bairdii
ENSLACG00000003722	rabl2	87	83.077	ENSPCIG00000012436	-	80	83.077	Phascolarctos_cinereus
ENSLACG00000003722	rabl2	97	76.364	ENSPFOG00000017960	rabl2	99	76.364	Poecilia_formosa
ENSLACG00000003722	rabl2	97	77.064	ENSPLAG00000015685	rabl2	99	77.064	Poecilia_latipinna
ENSLACG00000003722	rabl2	97	77.064	ENSPMEG00000004703	rabl2	99	77.064	Poecilia_mexicana
ENSLACG00000003722	rabl2	88	80.203	ENSPREG00000014761	rabl2	94	83.069	Poecilia_reticulata
ENSLACG00000003722	rabl2	96	78.704	ENSPPYG00000012000	-	93	78.704	Pongo_abelii
ENSLACG00000003722	rabl2	96	81.019	ENSPCOG00000024865	-	93	81.019	Propithecus_coquereli
ENSLACG00000003722	rabl2	92	75.115	ENSPVAG00000004539	-	91	75.115	Pteropus_vampyrus
ENSLACG00000003722	rabl2	95	79.245	ENSPNYG00000004845	rabl2	95	79.245	Pundamilia_nyererei
ENSLACG00000003722	rabl2	90	85.075	ENSPNAG00000024254	rabl2	100	81.696	Pygocentrus_nattereri
ENSLACG00000003722	rabl2	99	75.225	ENSRNOG00000013947	Rabl2	89	75.225	Rattus_norvegicus
ENSLACG00000003722	rabl2	95	78.505	ENSRBIG00000033607	-	93	78.505	Rhinopithecus_bieti
ENSLACG00000003722	rabl2	95	78.972	ENSRROG00000031130	-	93	78.972	Rhinopithecus_roxellana
ENSLACG00000003722	rabl2	92	81.463	ENSSBOG00000033266	-	90	81.463	Saimiri_boliviensis_boliviensis
ENSLACG00000003722	rabl2	91	85.294	ENSSFOG00015020738	rabl2	98	81.735	Scleropages_formosus
ENSLACG00000003722	rabl2	95	78.873	ENSSMAG00000004606	rabl2	96	78.873	Scophthalmus_maximus
ENSLACG00000003722	rabl2	95	79.343	ENSSDUG00000014765	rabl2	96	79.343	Seriola_dumerili
ENSLACG00000003722	rabl2	76	80.588	ENSSSCG00000025041	-	100	80.588	Sus_scrofa
ENSLACG00000003722	rabl2	92	73.558	ENSTGUG00000016028	-	99	73.558	Taeniopygia_guttata
ENSLACG00000003722	rabl2	95	77.934	ENSTRUG00000012454	rabl2	96	77.934	Takifugu_rubripes
ENSLACG00000003722	rabl2	95	78.404	ENSTNIG00000017951	rabl2	96	78.404	Tetraodon_nigroviridis
ENSLACG00000003722	rabl2	90	80.198	ENSUAMG00000015761	-	90	80.198	Ursus_americanus
ENSLACG00000003722	rabl2	92	81.951	ENSUMAG00000017116	-	92	81.951	Ursus_maritimus
ENSLACG00000003722	rabl2	99	75.225	ENSVVUG00000025761	-	99	75.225	Vulpes_vulpes
ENSLACG00000003722	rabl2	100	78.761	ENSXETG00000015712	rabl2b	100	78.761	Xenopus_tropicalis
ENSLACG00000003722	rabl2	91	79.902	ENSXMAG00000004569	rabl2	96	78.505	Xiphophorus_maculatus