EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000003798 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1832 bases
Position: chrJH129603.1:97376-99207
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004265	Exo_endo_phos	PF03372.23	1.2e-06	1	1
ENSLACP00000004266	Exo_endo_phos	PF03372.23	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004304	-	807	-	ENSLACP00000004266	269 (aa)	-	H3A3P5
ENSLACT00000004303	-	534	-	ENSLACP00000004265	178 (aa)	-	H3A3P4
ENSLACT00000004302	-	804	-	ENSLACP00000004264	268 (aa)	-	H3A3P3

Gene Model

Click here to download ENSLACG00000003798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000003798	-	74	37.405	ENSLACG00000002589	-	68	37.405
ENSLACG00000003798	-	97	34.884	ENSLACG00000013797	-	68	33.205
ENSLACG00000003798	-	97	43.931	ENSLACG00000005942	-	61	35.606
ENSLACG00000003798	-	96	32.941	ENSLACG00000007576	-	74	32.950
ENSLACG00000003798	-	97	38.372	ENSLACG00000009787	-	74	34.599
ENSLACG00000003798	-	98	66.667	ENSLACG00000009073	-	73	60.837
ENSLACG00000003798	-	97	42.197	ENSLACG00000010026	-	56	34.848
ENSLACG00000003798	-	97	38.372	ENSLACG00000008451	-	57	34.701
ENSLACG00000003798	-	92	31.707	ENSLACG00000004402	-	58	31.720
ENSLACG00000003798	-	94	40.476	ENSLACG00000002295	-	76	36.719
ENSLACG00000003798	-	97	37.791	ENSLACG00000004872	-	59	32.453
ENSLACG00000003798	-	97	45.349	ENSLACG00000004681	-	62	37.453
ENSLACG00000003798	-	94	33.929	ENSLACG00000002807	-	57	31.679
ENSLACG00000003798	-	98	35.632	ENSLACG00000001984	-	69	31.801

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003798	-	97	34.483	ENSAPOG00000016904	-	63	31.641	Acanthochromis_polyacanthus
ENSLACG00000003798	-	97	41.714	ENSAPOG00000021898	-	56	36.822	Acanthochromis_polyacanthus
ENSLACG00000003798	-	93	31.515	ENSAPOG00000012457	-	61	31.559	Acanthochromis_polyacanthus
ENSLACG00000003798	-	98	35.632	ENSAPOG00000010713	-	67	33.585	Acanthochromis_polyacanthus
ENSLACG00000003798	-	97	38.372	ENSACIG00000019184	-	63	34.363	Amphilophus_citrinellus
ENSLACG00000003798	-	98	35.632	ENSACIG00000008906	-	59	32.061	Amphilophus_citrinellus
ENSLACG00000003798	-	97	37.791	ENSACIG00000012844	-	64	34.091	Amphilophus_citrinellus
ENSLACG00000003798	-	95	33.898	ENSACAG00000022260	-	59	30.147	Anolis_carolinensis
ENSLACG00000003798	-	97	32.955	ENSACAG00000023537	-	64	30.980	Anolis_carolinensis
ENSLACG00000003798	-	98	33.143	ENSACAG00000023828	-	75	31.276	Anolis_carolinensis
ENSLACG00000003798	-	94	37.059	ENSACAG00000027405	-	56	33.716	Anolis_carolinensis
ENSLACG00000003798	-	97	35.955	ENSACAG00000027158	-	53	32.353	Anolis_carolinensis
ENSLACG00000003798	-	97	35.838	ENSACAG00000024104	-	73	34.715	Anolis_carolinensis
ENSLACG00000003798	-	98	30.387	ENSACAG00000017345	-	64	30.522	Anolis_carolinensis
ENSLACG00000003798	-	95	38.012	ENSACAG00000023809	-	54	33.462	Anolis_carolinensis
ENSLACG00000003798	-	94	32.370	ENSACAG00000022781	-	54	30.645	Anolis_carolinensis
ENSLACG00000003798	-	94	38.596	ENSACAG00000024977	-	51	33.460	Anolis_carolinensis
ENSLACG00000003798	-	97	33.333	ENSACAG00000024244	-	53	31.481	Anolis_carolinensis
ENSLACG00000003798	-	94	34.320	ENSACAG00000022659	-	72	31.047	Anolis_carolinensis
ENSLACG00000003798	-	94	37.427	ENSACAG00000024455	-	63	32.824	Anolis_carolinensis
ENSLACG00000003798	-	94	37.714	ENSACAG00000026859	-	69	33.955	Anolis_carolinensis
ENSLACG00000003798	-	97	37.778	ENSACAG00000022930	-	57	33.824	Anolis_carolinensis
ENSLACG00000003798	-	94	38.596	ENSACAG00000023710	-	62	35.833	Anolis_carolinensis
ENSLACG00000003798	-	94	35.882	ENSACAG00000025708	-	71	30.651	Anolis_carolinensis
ENSLACG00000003798	-	97	33.908	ENSACAG00000022131	-	70	30.827	Anolis_carolinensis
ENSLACG00000003798	-	94	36.842	ENSACAG00000001859	-	51	33.209	Anolis_carolinensis
ENSLACG00000003798	-	97	39.665	ENSACAG00000026942	-	55	35.606	Anolis_carolinensis
ENSLACG00000003798	-	95	36.842	ENSACAG00000010540	-	63	33.846	Anolis_carolinensis
ENSLACG00000003798	-	97	37.500	ENSACAG00000026784	-	72	33.955	Anolis_carolinensis
ENSLACG00000003798	-	94	37.427	ENSACAG00000022384	-	70	34.351	Anolis_carolinensis
ENSLACG00000003798	-	96	40.351	ENSACLG00000005243	-	70	40.556	Astatotilapia_calliptera
ENSLACG00000003798	-	97	39.535	ENSACLG00000004195	-	64	35.338	Astatotilapia_calliptera
ENSLACG00000003798	-	97	38.372	ENSACLG00000023741	-	56	35.741	Astatotilapia_calliptera
ENSLACG00000003798	-	97	39.114	ENSACLG00000001544	-	74	39.114	Astatotilapia_calliptera
ENSLACG00000003798	-	97	37.931	ENSACLG00000027777	-	71	35.644	Astatotilapia_calliptera
ENSLACG00000003798	-	94	37.500	ENSACLG00000003105	-	58	36.187	Astatotilapia_calliptera
ENSLACG00000003798	-	97	39.535	ENSACLG00000001415	-	60	35.338	Astatotilapia_calliptera
ENSLACG00000003798	-	96	38.824	ENSACLG00000003399	-	70	31.698	Astatotilapia_calliptera
ENSLACG00000003798	-	97	44.186	ENSCVAG00000008582	-	60	37.453	Cyprinodon_variegatus
ENSLACG00000003798	-	97	35.227	ENSECAG00000007429	-	64	35.196	Equus_caballus
ENSLACG00000003798	-	97	34.270	ENSECAG00000022540	-	72	34.270	Equus_caballus
ENSLACG00000003798	-	99	37.017	ENSECAG00000034796	-	60	37.017	Equus_caballus
ENSLACG00000003798	-	97	38.372	ENSFHEG00000007794	-	57	33.077	Fundulus_heteroclitus
ENSLACG00000003798	-	99	30.726	ENSHGLG00000020596	-	69	30.726	Heterocephalus_glaber_female
ENSLACG00000003798	-	97	47.093	ENSKMAG00000002817	-	57	40.075	Kryptolebias_marmoratus
ENSLACG00000003798	-	97	38.068	ENSMMUG00000029743	-	72	35.000	Macaca_mulatta
ENSLACG00000003798	-	97	38.068	ENSMMUG00000039873	-	81	35.039	Macaca_mulatta
ENSLACG00000003798	-	97	37.500	ENSMMUG00000041234	-	74	35.874	Macaca_mulatta
ENSLACG00000003798	-	97	38.068	ENSMMUG00000040023	-	75	37.681	Macaca_mulatta
ENSLACG00000003798	-	85	38.158	ENSMZEG00005019175	-	66	38.158	Maylandia_zebra
ENSLACG00000003798	-	97	39.535	ENSMZEG00005017035	-	70	35.338	Maylandia_zebra
ENSLACG00000003798	-	97	40.116	ENSMZEG00005016749	-	61	36.863	Maylandia_zebra
ENSLACG00000003798	-	97	37.288	ENSMZEG00005023757	-	77	31.227	Maylandia_zebra
ENSLACG00000003798	-	97	38.506	ENSMZEG00005015499	-	73	36.634	Maylandia_zebra
ENSLACG00000003798	-	97	37.356	ENSMZEG00005026934	-	81	33.333	Maylandia_zebra
ENSLACG00000003798	-	97	37.269	ENSMZEG00005013453	-	73	37.269	Maylandia_zebra
ENSLACG00000003798	-	97	41.954	ENSMMOG00000005815	-	59	38.735	Mola_mola
ENSLACG00000003798	-	97	30.233	ENSMODG00000028992	-	67	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000029688	-	58	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000028762	-	50	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000029202	-	52	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000028799	-	54	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000029341	-	64	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000027902	-	57	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000029727	-	50	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000029216	-	52	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000028119	-	52	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000028110	-	51	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000028497	-	50	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	30.233	ENSMODG00000029032	-	52	30.233	Monodelphis_domestica
ENSLACG00000003798	-	97	32.000	ENSMUSG00000094472	Gm21897	51	30.116	Mus_musculus
ENSLACG00000003798	-	92	34.146	ENSMUSG00000096463	Gm21750	51	31.274	Mus_musculus
ENSLACG00000003798	-	97	31.429	ENSMUSG00000094030	Gm21833	50	30.159	Mus_musculus
ENSLACG00000003798	-	97	32.000	ENSMUSG00000096808	AC132444.6	51	30.116	Mus_musculus
ENSLACG00000003798	-	92	33.537	ENSMUSG00000090353	Gm17555	69	30.502	Mus_musculus
ENSLACG00000003798	-	94	37.126	ENSMPUG00000018497	-	65	32.836	Mustela_putorius_furo
ENSLACG00000003798	-	98	40.805	ENSNBRG00000020944	-	80	37.175	Neolamprologus_brichardi
ENSLACG00000003798	-	96	34.118	ENSNBRG00000010546	-	67	31.801	Neolamprologus_brichardi
ENSLACG00000003798	-	97	37.931	ENSONIG00000021276	-	80	34.052	Oreochromis_niloticus
ENSLACG00000003798	-	80	36.620	ENSOCUG00000029503	-	63	35.333	Oryctolagus_cuniculus
ENSLACG00000003798	-	98	35.632	ENSORLG00015009902	-	60	36.000	Oryzias_latipes_hsok
ENSLACG00000003798	-	97	39.080	ENSORLG00015005588	-	67	37.500	Oryzias_latipes_hsok
ENSLACG00000003798	-	97	35.465	ENSORLG00015008034	-	59	32.950	Oryzias_latipes_hsok
ENSLACG00000003798	-	94	35.928	ENSOARG00000013322	-	56	31.835	Ovis_aries
ENSLACG00000003798	-	97	38.636	ENSPANG00000033689	-	73	38.298	Papio_anubis
ENSLACG00000003798	-	97	41.618	ENSPMGG00000010085	-	78	38.202	Periophthalmus_magnuspinnatus
ENSLACG00000003798	-	98	42.529	ENSPLAG00000014958	-	52	42.529	Poecilia_latipinna
ENSLACG00000003798	-	97	38.372	ENSPLAG00000019722	-	67	34.470	Poecilia_latipinna
ENSLACG00000003798	-	98	42.529	ENSPMEG00000017446	-	51	42.529	Poecilia_mexicana
ENSLACG00000003798	-	97	39.535	ENSPMEG00000000053	-	67	35.227	Poecilia_mexicana
ENSLACG00000003798	-	95	37.870	ENSPNYG00000002207	-	79	36.782	Pundamilia_nyererei
ENSLACG00000003798	-	97	39.535	ENSPNAG00000016867	-	63	33.840	Pygocentrus_nattereri
ENSLACG00000003798	-	94	38.372	ENSSDUG00000018238	-	73	34.733	Seriola_dumerili
ENSLACG00000003798	-	95	43.787	ENSSPAG00000002492	-	69	39.464	Stegastes_partitus
ENSLACG00000003798	-	94	34.132	ENSXETG00000010370	-	64	31.496	Xenopus_tropicalis
ENSLACG00000003798	-	94	34.731	ENSXETG00000030935	-	71	34.731	Xenopus_tropicalis
ENSLACG00000003798	-	94	34.731	ENSXETG00000031821	-	70	31.418	Xenopus_tropicalis
ENSLACG00000003798	-	99	35.227	ENSXETG00000031161	-	55	31.939	Xenopus_tropicalis
ENSLACG00000003798	-	95	36.000	ENSXETG00000031335	-	57	33.203	Xenopus_tropicalis
ENSLACG00000003798	-	98	35.057	ENSXETG00000031535	-	61	32.841	Xenopus_tropicalis
ENSLACG00000003798	-	96	30.286	ENSXETG00000033389	-	73	30.286	Xenopus_tropicalis
ENSLACG00000003798	-	96	38.596	ENSXETG00000033886	-	77	33.071	Xenopus_tropicalis
ENSLACG00000003798	-	95	36.095	ENSXETG00000002398	-	68	32.955	Xenopus_tropicalis
ENSLACG00000003798	-	94	36.527	ENSXETG00000031893	-	64	32.046	Xenopus_tropicalis
ENSLACG00000003798	-	99	35.227	ENSXETG00000031921	-	63	31.660	Xenopus_tropicalis
ENSLACG00000003798	-	94	41.317	ENSXETG00000003659	-	64	38.462	Xenopus_tropicalis
ENSLACG00000003798	-	94	33.533	ENSXETG00000030408	-	66	31.783	Xenopus_tropicalis
ENSLACG00000003798	-	99	31.818	ENSXETG00000033835	-	67	30.657	Xenopus_tropicalis
ENSLACG00000003798	-	98	35.955	ENSXETG00000033765	-	62	32.616	Xenopus_tropicalis
ENSLACG00000003798	-	94	35.928	ENSXETG00000033763	-	60	32.661	Xenopus_tropicalis
ENSLACG00000003798	-	98	36.782	ENSXETG00000032168	-	64	33.208	Xenopus_tropicalis
ENSLACG00000003798	-	99	35.227	ENSXETG00000033118	-	55	31.939	Xenopus_tropicalis
ENSLACG00000003798	-	94	32.558	ENSXETG00000020006	-	64	32.955	Xenopus_tropicalis
ENSLACG00000003798	-	97	38.202	ENSXETG00000019951	-	65	34.241	Xenopus_tropicalis
ENSLACG00000003798	-	93	33.939	ENSXETG00000023937	-	64	31.008	Xenopus_tropicalis
ENSLACG00000003798	-	100	34.831	ENSXETG00000032876	-	65	32.558	Xenopus_tropicalis
ENSLACG00000003798	-	80	40.845	ENSXETG00000032871	-	67	35.169	Xenopus_tropicalis
ENSLACG00000003798	-	97	35.429	ENSXETG00000031025	-	68	31.769	Xenopus_tropicalis
ENSLACG00000003798	-	98	37.931	ENSXETG00000031978	-	70	34.483	Xenopus_tropicalis
ENSLACG00000003798	-	63	32.143	ENSXETG00000034278	-	64	32.143	Xenopus_tropicalis
ENSLACG00000003798	-	94	32.335	ENSXETG00000026017	-	71	32.335	Xenopus_tropicalis
ENSLACG00000003798	-	98	33.908	ENSXETG00000030050	-	72	33.086	Xenopus_tropicalis
ENSLACG00000003798	-	98	32.184	ENSXETG00000033289	-	67	30.657	Xenopus_tropicalis
ENSLACG00000003798	-	97	32.759	ENSXETG00000026296	-	61	31.765	Xenopus_tropicalis
ENSLACG00000003798	-	96	30.814	ENSXETG00000031013	-	73	30.814	Xenopus_tropicalis
ENSLACG00000003798	-	97	39.429	ENSXETG00000030615	-	65	34.470	Xenopus_tropicalis
ENSLACG00000003798	-	99	34.659	ENSXETG00000033336	-	53	31.179	Xenopus_tropicalis
ENSLACG00000003798	-	94	30.409	ENSXETG00000033331	-	69	31.939	Xenopus_tropicalis
ENSLACG00000003798	-	95	35.088	ENSXETG00000031779	-	52	32.157	Xenopus_tropicalis
ENSLACG00000003798	-	94	33.918	ENSXETG00000030588	-	64	33.716	Xenopus_tropicalis
ENSLACG00000003798	-	94	35.673	ENSXETG00000033892	-	71	35.323	Xenopus_tropicalis
ENSLACG00000003798	-	99	35.227	ENSXETG00000030293	-	63	31.660	Xenopus_tropicalis
ENSLACG00000003798	-	79	35.714	ENSXETG00000032507	-	74	34.211	Xenopus_tropicalis
ENSLACG00000003798	-	99	35.227	ENSXETG00000031237	-	55	31.939	Xenopus_tropicalis
ENSLACG00000003798	-	98	35.754	ENSXETG00000034095	-	62	32.500	Xenopus_tropicalis
ENSLACG00000003798	-	95	36.095	ENSXETG00000034113	-	68	32.955	Xenopus_tropicalis
ENSLACG00000003798	-	98	34.483	ENSXETG00000030078	-	66	31.852	Xenopus_tropicalis
ENSLACG00000003798	-	99	35.227	ENSXETG00000032255	-	76	35.227	Xenopus_tropicalis
ENSLACG00000003798	-	94	31.579	ENSXETG00000033739	-	62	32.700	Xenopus_tropicalis
ENSLACG00000003798	-	98	35.057	ENSXETG00000034064	-	61	32.841	Xenopus_tropicalis
ENSLACG00000003798	-	92	30.723	ENSXETG00000034353	-	75	30.723	Xenopus_tropicalis
ENSLACG00000003798	-	99	32.044	ENSXETG00000033395	-	55	31.250	Xenopus_tropicalis
ENSLACG00000003798	-	99	34.659	ENSXETG00000030767	-	62	31.273	Xenopus_tropicalis
ENSLACG00000003798	-	94	32.558	ENSXETG00000025558	-	63	32.700	Xenopus_tropicalis
ENSLACG00000003798	-	97	35.955	ENSXETG00000032017	-	60	30.072	Xenopus_tropicalis
ENSLACG00000003798	-	94	30.409	ENSXETG00000026477	-	64	31.939	Xenopus_tropicalis
ENSLACG00000003798	-	94	32.934	ENSXETG00000023159	-	76	31.452	Xenopus_tropicalis
ENSLACG00000003798	-	99	31.250	ENSXETG00000033292	-	67	30.292	Xenopus_tropicalis
ENSLACG00000003798	-	97	36.416	ENSXETG00000033299	-	66	35.273	Xenopus_tropicalis
ENSLACG00000003798	-	94	32.090	ENSXETG00000030277	-	71	32.090	Xenopus_tropicalis
ENSLACG00000003798	-	98	36.517	ENSXETG00000032834	-	68	33.213	Xenopus_tropicalis
ENSLACG00000003798	-	96	32.955	ENSXETG00000030418	-	59	31.955	Xenopus_tropicalis
ENSLACG00000003798	-	94	34.731	ENSXETG00000031405	-	54	31.496	Xenopus_tropicalis
ENSLACG00000003798	-	99	36.364	ENSXETG00000025636	-	75	36.364	Xenopus_tropicalis
ENSLACG00000003798	-	96	37.427	ENSXETG00000033090	-	66	33.083	Xenopus_tropicalis
ENSLACG00000003798	-	97	37.500	ENSXETG00000027781	-	69	33.579	Xenopus_tropicalis
ENSLACG00000003798	-	96	30.286	ENSXETG00000032028	-	73	30.286	Xenopus_tropicalis
ENSLACG00000003798	-	94	35.329	ENSXETG00000032180	-	69	33.977	Xenopus_tropicalis
ENSLACG00000003798	-	93	38.323	ENSXETG00000008562	-	64	35.547	Xenopus_tropicalis
ENSLACG00000003798	-	97	36.628	ENSXCOG00000009068	-	59	34.733	Xiphophorus_couchianus
ENSLACG00000003798	-	97	35.795	ENSXCOG00000012940	-	67	31.461	Xiphophorus_couchianus