EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000003828 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 1915 bases
Position: chrJH127255.1:98198-100112
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004303	AF-4	PF05110.13	1.5e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004341	-	990	-	ENSLACP00000004303	330 (aa)	-	H3A3T2

Gene Model

Click here to download ENSLACG00000003828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000003828	-	95	45.559	ENSLACG00000008183	-	75	44.413

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003828	-	99	38.701	ENSG00000155966	AFF2	80	38.636	Homo_sapiens
ENSLACG00000003828	-	95	50.949	ENSG00000144218	AFF3	82	82.716	Homo_sapiens
ENSLACG00000003828	-	94	55.732	ENSAMEG00000015682	-	99	54.459	Ailuropoda_melanoleuca
ENSLACG00000003828	-	95	55.660	ENSAPLG00000016085	-	97	56.918	Anas_platyrhynchos
ENSLACG00000003828	-	95	49.045	ENSCPOG00000006346	AFF3	83	76.471	Cavia_porcellus
ENSLACG00000003828	-	95	49.682	ENSCLAG00000017100	AFF3	76	80.769	Chinchilla_lanigera
ENSLACG00000003828	-	95	50.794	ENSCGRG00000003408	Aff3	76	79.487	Cricetulus_griseus_crigri
ENSLACG00000003828	-	95	54.747	ENSDNOG00000047074	-	92	53.481	Dasypus_novemcinctus
ENSLACG00000003828	-	95	50.318	ENSDORG00000007294	Aff3	76	82.051	Dipodomys_ordii
ENSLACG00000003828	-	95	50.794	ENSFALG00000003872	-	99	50.794	Ficedula_albicollis
ENSLACG00000003828	-	82	56.934	ENSGAGG00000003871	-	76	56.934	Gopherus_agassizii
ENSLACG00000003828	-	93	40.841	ENSGAGG00000024556	-	92	39.881	Gopherus_agassizii
ENSLACG00000003828	-	93	39.264	ENSGAGG00000025416	-	82	37.609	Gopherus_agassizii
ENSLACG00000003828	-	95	51.111	ENSSTOG00000012140	AFF3	72	83.333	Ictidomys_tridecemlineatus
ENSLACG00000003828	-	92	39.557	ENSSTOG00000026695	AFF4	75	62.366	Ictidomys_tridecemlineatus
ENSLACG00000003828	-	95	50.637	ENSJJAG00000013155	Aff3	76	83.333	Jaculus_jaculus
ENSLACG00000003828	-	98	50.926	ENSMGAG00000014794	-	98	50.920	Meleagris_gallopavo
ENSLACG00000003828	-	82	42.712	ENSMGAG00000008263	-	99	42.321	Meleagris_gallopavo
ENSLACG00000003828	-	95	55.414	ENSMODG00000001458	-	94	55.414	Monodelphis_domestica
ENSLACG00000003828	-	95	50.000	ENSMUSG00000037138	Aff3	65	80.769	Mus_musculus
ENSLACG00000003828	-	95	50.000	ENSMLUG00000015255	AFF3	56	48.726	Myotis_lucifugus
ENSLACG00000003828	-	95	51.911	ENSNGAG00000002408	Aff3	65	82.051	Nannospalax_galili
ENSLACG00000003828	-	95	44.937	ENSOANG00000004624	-	99	44.937	Ornithorhynchus_anatinus
ENSLACG00000003828	-	84	38.944	ENSOANG00000001096	-	99	38.961	Ornithorhynchus_anatinus
ENSLACG00000003828	-	95	55.660	ENSOARG00000013344	-	96	54.403	Ovis_aries
ENSLACG00000003828	-	95	39.514	ENSPTIG00000018890	AFF2	77	38.393	Panthera_tigris_altaica
ENSLACG00000003828	-	95	49.841	ENSPEMG00000014802	Aff3	76	78.205	Peromyscus_maniculatus_bairdii
ENSLACG00000003828	-	93	38.438	ENSRBIG00000040484	-	93	38.438	Rhinopithecus_bieti
ENSLACG00000003828	-	98	41.854	ENSSHAG00000009556	AFF2	95	41.840	Sarcophilus_harrisii
ENSLACG00000003828	-	87	56.667	ENSSHAG00000014244	-	100	58.000	Sarcophilus_harrisii
ENSLACG00000003828	-	85	37.700	ENSSFOG00015009105	-	85	41.433	Scleropages_formosus
ENSLACG00000003828	-	92	36.392	ENSSFOG00015000839	-	75	34.043	Scleropages_formosus
ENSLACG00000003828	-	85	33.962	ENSSMAG00000007062	-	76	32.692	Scophthalmus_maximus
ENSLACG00000003828	-	93	37.462	ENSSDUG00000013932	-	76	35.260	Seriola_dumerili
ENSLACG00000003828	-	94	37.425	ENSSLDG00000022289	-	76	35.244	Seriola_lalandi_dorsalis
ENSLACG00000003828	-	95	51.429	ENSTGUG00000010070	-	86	51.429	Taeniopygia_guttata
ENSLACG00000003828	-	93	54.545	ENSUMAG00000007800	-	89	53.292	Ursus_maritimus