EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000003849 (Gene tree)
Gene ID: 102351233
Gene Symbol: LSM14B
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 29327 bases
Position: chrJH126883.1:98852-128178
Accession: 102351233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004327	FDF	PF09532.10	4.7e-22	1	1
ENSLACP00000004326	FDF	PF09532.10	5e-22	1	1
ENSLACP00000004327	SM-ATX	PF14438.6	2.7e-08	1	1
ENSLACP00000004326	SM-ATX	PF14438.6	2.7e-08	1	1
ENSLACP00000004327	LSM14	PF12701.7	1e-32	1	1
ENSLACP00000004326	LSM14	PF12701.7	1.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004365	LSM14B-202	1263	-	ENSLACP00000004327	420 (aa)	-	H3A3V6
ENSLACT00000004364	LSM14B-201	5321	XM_005996633	ENSLACP00000004326	433 (aa)	XP_014344209	H3A3V5

Gene Model

Click here to download ENSLACG00000003849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000003849	LSM14B	92	51.435	ENSLACG00000000166	LSM14A	86	54.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003849	LSM14B	99	67.529	ENSG00000149657	LSM14B	99	67.529	Homo_sapiens
ENSLACG00000003849	LSM14B	91	50.750	ENSAPOG00000001780	lsm14b	91	50.750	Acanthochromis_polyacanthus
ENSLACG00000003849	LSM14B	99	70.258	ENSAMEG00000013430	LSM14B	100	70.492	Ailuropoda_melanoleuca
ENSLACG00000003849	LSM14B	91	49.872	ENSACIG00000012266	lsm14b	89	74.286	Amphilophus_citrinellus
ENSLACG00000003849	LSM14B	100	45.805	ENSAOCG00000006667	LSM14B	91	62.590	Amphiprion_ocellaris
ENSLACG00000003849	LSM14B	91	50.500	ENSAOCG00000012380	lsm14b	91	50.500	Amphiprion_ocellaris
ENSLACG00000003849	LSM14B	91	47.804	ENSAPEG00000023633	lsm14b	90	46.565	Amphiprion_percula
ENSLACG00000003849	LSM14B	70	40.924	ENSATEG00000015895	LSM14B	89	38.095	Anabas_testudineus
ENSLACG00000003849	LSM14B	93	47.700	ENSATEG00000016603	lsm14b	91	49.626	Anabas_testudineus
ENSLACG00000003849	LSM14B	92	70.529	ENSAPLG00000013203	LSM14B	100	70.781	Anas_platyrhynchos
ENSLACG00000003849	LSM14B	100	66.589	ENSACAG00000016195	LSM14B	99	67.290	Anolis_carolinensis
ENSLACG00000003849	LSM14B	99	70.824	ENSANAG00000037915	LSM14B	99	70.588	Aotus_nancymaae
ENSLACG00000003849	LSM14B	91	47.727	ENSACLG00000019663	lsm14b	91	48.010	Astatotilapia_calliptera
ENSLACG00000003849	LSM14B	57	37.255	ENSACLG00000013004	-	76	36.170	Astatotilapia_calliptera
ENSLACG00000003849	LSM14B	100	57.306	ENSAMXG00000002865	lsm14b	91	56.683	Astyanax_mexicanus
ENSLACG00000003849	LSM14B	99	71.059	ENSBTAG00000021558	LSM14B	99	71.294	Bos_taurus
ENSLACG00000003849	LSM14B	99	71.059	ENSCJAG00000014434	LSM14B	99	70.588	Callithrix_jacchus
ENSLACG00000003849	LSM14B	91	69.588	ENSCAFG00000012518	LSM14B	98	69.845	Canis_familiaris
ENSLACG00000003849	LSM14B	99	71.529	ENSCAFG00020022150	LSM14B	99	88.489	Canis_lupus_dingo
ENSLACG00000003849	LSM14B	99	52.381	ENSCHIG00000022681	-	100	59.559	Capra_hircus
ENSLACG00000003849	LSM14B	99	70.588	ENSCHIG00000010284	-	99	70.824	Capra_hircus
ENSLACG00000003849	LSM14B	90	67.013	ENSTSYG00000031914	LSM14B	89	66.753	Carlito_syrichta
ENSLACG00000003849	LSM14B	90	65.803	ENSCAPG00000013059	LSM14B	100	67.638	Cavia_aperea
ENSLACG00000003849	LSM14B	90	65.974	ENSCPOG00000038080	LSM14B	100	67.961	Cavia_porcellus
ENSLACG00000003849	LSM14B	99	53.066	ENSCCAG00000024900	-	82	58.431	Cebus_capucinus
ENSLACG00000003849	LSM14B	99	67.059	ENSCCAG00000021267	LSM14B	99	67.059	Cebus_capucinus
ENSLACG00000003849	LSM14B	99	70.824	ENSCATG00000036006	LSM14B	99	70.588	Cercocebus_atys
ENSLACG00000003849	LSM14B	90	65.195	ENSCLAG00000003186	LSM14B	100	66.990	Chinchilla_lanigera
ENSLACG00000003849	LSM14B	99	71.294	ENSCSAG00000015729	LSM14B	99	71.059	Chlorocebus_sabaeus
ENSLACG00000003849	LSM14B	73	46.372	ENSCHOG00000006997	-	100	45.513	Choloepus_hoffmanni
ENSLACG00000003849	LSM14B	100	72.535	ENSCPBG00000027065	LSM14B	100	72.535	Chrysemys_picta_bellii
ENSLACG00000003849	LSM14B	90	64.935	ENSCANG00000036986	LSM14B	100	64.935	Colobus_angolensis_palliatus
ENSLACG00000003849	LSM14B	99	67.529	ENSCGRG00001018399	Lsm14b	100	66.667	Cricetulus_griseus_chok1gshd
ENSLACG00000003849	LSM14B	57	63.223	ENSCGRG00000002484	-	100	61.983	Cricetulus_griseus_crigri
ENSLACG00000003849	LSM14B	70	67.333	ENSCGRG00000006111	-	90	65.568	Cricetulus_griseus_crigri
ENSLACG00000003849	LSM14B	96	42.494	ENSCSEG00000020669	LSM14B	93	38.337	Cynoglossus_semilaevis
ENSLACG00000003849	LSM14B	91	49.114	ENSCSEG00000004722	lsm14b	90	49.114	Cynoglossus_semilaevis
ENSLACG00000003849	LSM14B	69	34.448	ENSCVAG00000012433	-	89	32.979	Cyprinodon_variegatus
ENSLACG00000003849	LSM14B	92	52.778	ENSDARG00000025386	lsm14b	91	80.000	Danio_rerio
ENSLACG00000003849	LSM14B	72	69.256	ENSDNOG00000025246	LSM14B	100	68.608	Dasypus_novemcinctus
ENSLACG00000003849	LSM14B	91	65.039	ENSDORG00000016683	Lsm14b	100	66.774	Dipodomys_ordii
ENSLACG00000003849	LSM14B	62	55.682	ENSETEG00000011188	-	100	80.000	Echinops_telfairi
ENSLACG00000003849	LSM14B	99	55.792	ENSETEG00000001869	-	90	53.846	Echinops_telfairi
ENSLACG00000003849	LSM14B	72	66.990	ENSEASG00005023218	LSM14B	100	66.129	Equus_asinus_asinus
ENSLACG00000003849	LSM14B	99	71.059	ENSECAG00000010659	LSM14B	99	71.294	Equus_caballus
ENSLACG00000003849	LSM14B	54	83.838	ENSEEUG00000007331	LSM14B	80	85.859	Erinaceus_europaeus
ENSLACG00000003849	LSM14B	91	50.378	ENSELUG00000016299	LSM14B	89	71.429	Esox_lucius
ENSLACG00000003849	LSM14B	99	53.991	ENSELUG00000005780	lsm14b	91	55.388	Esox_lucius
ENSLACG00000003849	LSM14B	99	68.235	ENSFCAG00000003248	LSM14B	99	88.489	Felis_catus
ENSLACG00000003849	LSM14B	91	71.465	ENSFALG00000010618	LSM14B	100	71.465	Ficedula_albicollis
ENSLACG00000003849	LSM14B	90	64.935	ENSFDAG00000002214	LSM14B	100	66.343	Fukomys_damarensis
ENSLACG00000003849	LSM14B	79	39.674	ENSFHEG00000003362	LSM14B	79	43.059	Fundulus_heteroclitus
ENSLACG00000003849	LSM14B	93	46.535	ENSFHEG00000006237	lsm14b	89	73.944	Fundulus_heteroclitus
ENSLACG00000003849	LSM14B	86	72.993	ENSGMOG00000017115	lsm14b	87	72.464	Gadus_morhua
ENSLACG00000003849	LSM14B	100	71.528	ENSGALG00000005125	LSM14B	100	72.685	Gallus_gallus
ENSLACG00000003849	LSM14B	69	38.908	ENSGAFG00000013723	LSM14B	86	83.333	Gambusia_affinis
ENSLACG00000003849	LSM14B	66	73.944	ENSGAFG00000020318	lsm14b	61	73.944	Gambusia_affinis
ENSLACG00000003849	LSM14B	92	48.000	ENSGACG00000009973	lsm14b	90	48.843	Gasterosteus_aculeatus
ENSLACG00000003849	LSM14B	57	68.852	ENSGAGG00000004106	LSM14B	94	68.980	Gopherus_agassizii
ENSLACG00000003849	LSM14B	92	64.450	ENSGGOG00000005630	LSM14B	100	66.667	Gorilla_gorilla
ENSLACG00000003849	LSM14B	99	67.294	ENSHGLG00000015055	LSM14B	100	66.667	Heterocephalus_glaber_female
ENSLACG00000003849	LSM14B	90	63.377	ENSHGLG00100015273	LSM14B	100	66.667	Heterocephalus_glaber_male
ENSLACG00000003849	LSM14B	64	37.269	ENSHCOG00000004867	lsm14b	83	35.926	Hippocampus_comes
ENSLACG00000003849	LSM14B	96	46.479	ENSHCOG00000018747	LSM14B	91	47.030	Hippocampus_comes
ENSLACG00000003849	LSM14B	91	57.398	ENSIPUG00000014946	lsm14b	85	57.360	Ictalurus_punctatus
ENSLACG00000003849	LSM14B	90	65.974	ENSSTOG00000020482	LSM14B	100	67.638	Ictidomys_tridecemlineatus
ENSLACG00000003849	LSM14B	99	67.376	ENSJJAG00000012728	Lsm14b	100	66.667	Jaculus_jaculus
ENSLACG00000003849	LSM14B	91	48.139	ENSKMAG00000017524	lsm14b	92	45.729	Kryptolebias_marmoratus
ENSLACG00000003849	LSM14B	100	59.028	ENSLOCG00000003746	lsm14b	90	58.734	Lepisosteus_oculatus
ENSLACG00000003849	LSM14B	91	66.324	ENSLAFG00000007492	LSM14B	100	66.838	Loxodonta_africana
ENSLACG00000003849	LSM14B	99	71.294	ENSMFAG00000041479	LSM14B	99	71.059	Macaca_fascicularis
ENSLACG00000003849	LSM14B	99	67.529	ENSMMUG00000014084	LSM14B	99	67.529	Macaca_mulatta
ENSLACG00000003849	LSM14B	99	67.529	ENSMNEG00000045573	LSM14B	99	67.529	Macaca_nemestrina
ENSLACG00000003849	LSM14B	90	64.675	ENSMLEG00000040895	LSM14B	100	64.675	Mandrillus_leucophaeus
ENSLACG00000003849	LSM14B	78	74.648	ENSMAMG00000020539	lsm14b	90	74.648	Mastacembelus_armatus
ENSLACG00000003849	LSM14B	96	47.356	ENSMAMG00000024124	LSM14B	91	66.187	Mastacembelus_armatus
ENSLACG00000003849	LSM14B	91	47.727	ENSMZEG00005000987	lsm14b	91	48.010	Maylandia_zebra
ENSLACG00000003849	LSM14B	92	63.342	ENSMGAG00000005300	LSM14B	100	64.838	Meleagris_gallopavo
ENSLACG00000003849	LSM14B	99	67.529	ENSMAUG00000020700	Lsm14b	100	66.343	Mesocricetus_auratus
ENSLACG00000003849	LSM14B	99	72.000	ENSMICG00000014675	LSM14B	99	71.529	Microcebus_murinus
ENSLACG00000003849	LSM14B	65	56.272	ENSMOCG00000005119	-	91	55.678	Microtus_ochrogaster
ENSLACG00000003849	LSM14B	99	67.059	ENSMOCG00000020600	Lsm14b	100	66.343	Microtus_ochrogaster
ENSLACG00000003849	LSM14B	91	47.222	ENSMMOG00000020042	lsm14b	93	48.485	Mola_mola
ENSLACG00000003849	LSM14B	92	46.020	ENSMMOG00000017321	LSM14B	90	45.844	Mola_mola
ENSLACG00000003849	LSM14B	72	70.227	ENSMODG00000016690	LSM14B	100	69.579	Monodelphis_domestica
ENSLACG00000003849	LSM14B	99	48.219	ENSMALG00000004783	lsm14b	90	47.409	Monopterus_albus
ENSLACG00000003849	LSM14B	93	45.610	ENSMALG00000022251	LSM14B	91	45.658	Monopterus_albus
ENSLACG00000003849	LSM14B	99	71.529	MGP_CAROLIEiJ_G0024770	Lsm14b	99	71.059	Mus_caroli
ENSLACG00000003849	LSM14B	99	67.529	ENSMUSG00000039108	Lsm14b	100	66.667	Mus_musculus
ENSLACG00000003849	LSM14B	99	71.059	MGP_PahariEiJ_G0026214	Lsm14b	99	70.588	Mus_pahari
ENSLACG00000003849	LSM14B	99	71.529	MGP_SPRETEiJ_G0025693	Lsm14b	99	71.059	Mus_spretus
ENSLACG00000003849	LSM14B	95	68.966	ENSMPUG00000007584	LSM14B	100	68.719	Mustela_putorius_furo
ENSLACG00000003849	LSM14B	99	67.689	ENSMLUG00000000304	LSM14B	99	67.689	Myotis_lucifugus
ENSLACG00000003849	LSM14B	54	66.379	ENSNGAG00000016550	Lsm14b	100	66.379	Nannospalax_galili
ENSLACG00000003849	LSM14B	90	65.455	ENSNLEG00000015757	LSM14B	100	65.455	Nomascus_leucogenys
ENSLACG00000003849	LSM14B	71	85.714	ENSMEUG00000008267	-	76	88.112	Notamacropus_eugenii
ENSLACG00000003849	LSM14B	99	68.471	ENSODEG00000004099	LSM14B	100	68.285	Octodon_degus
ENSLACG00000003849	LSM14B	91	47.901	ENSONIG00000020318	lsm14b	91	50.498	Oreochromis_niloticus
ENSLACG00000003849	LSM14B	75	60.952	ENSOANG00000003370	LSM14B	98	60.465	Ornithorhynchus_anatinus
ENSLACG00000003849	LSM14B	91	65.116	ENSOCUG00000006279	LSM14B	100	64.858	Oryctolagus_cuniculus
ENSLACG00000003849	LSM14B	91	46.667	ENSORLG00000013525	lsm14b	91	48.485	Oryzias_latipes
ENSLACG00000003849	LSM14B	94	43.165	ENSORLG00000028353	LSM14B	91	58.865	Oryzias_latipes
ENSLACG00000003849	LSM14B	91	46.667	ENSORLG00020020553	lsm14b	91	48.485	Oryzias_latipes_hni
ENSLACG00000003849	LSM14B	66	37.011	ENSORLG00020018191	-	84	35.088	Oryzias_latipes_hni
ENSLACG00000003849	LSM14B	91	46.667	ENSORLG00015016862	lsm14b	91	48.485	Oryzias_latipes_hsok
ENSLACG00000003849	LSM14B	94	42.995	ENSORLG00015013157	LSM14B	91	59.574	Oryzias_latipes_hsok
ENSLACG00000003849	LSM14B	91	46.420	ENSOMEG00000023917	lsm14b	91	48.232	Oryzias_melastigma
ENSLACG00000003849	LSM14B	99	71.127	ENSOGAG00000003915	LSM14B	99	70.892	Otolemur_garnettii
ENSLACG00000003849	LSM14B	92	67.939	ENSOARG00000014706	LSM14B	98	69.171	Ovis_aries
ENSLACG00000003849	LSM14B	92	64.450	ENSPPAG00000035799	LSM14B	95	64.450	Pan_paniscus
ENSLACG00000003849	LSM14B	99	68.235	ENSPPRG00000009197	LSM14B	99	88.489	Panthera_pardus
ENSLACG00000003849	LSM14B	70	68.000	ENSPTIG00000021518	LSM14B	91	66.300	Panthera_tigris_altaica
ENSLACG00000003849	LSM14B	99	67.529	ENSPTRG00000013696	LSM14B	99	67.529	Pan_troglodytes
ENSLACG00000003849	LSM14B	99	67.294	ENSPANG00000011747	LSM14B	99	67.294	Papio_anubis
ENSLACG00000003849	LSM14B	100	57.746	ENSPKIG00000003275	lsm14b	91	86.735	Paramormyrops_kingsleyae
ENSLACG00000003849	LSM14B	91	64.781	ENSPSIG00000014762	LSM14B	100	66.019	Pelodiscus_sinensis
ENSLACG00000003849	LSM14B	99	67.217	ENSPEMG00000017688	Lsm14b	100	66.981	Peromyscus_maniculatus_bairdii
ENSLACG00000003849	LSM14B	99	69.882	ENSPCIG00000013405	LSM14B	99	88.489	Phascolarctos_cinereus
ENSLACG00000003849	LSM14B	100	47.380	ENSPFOG00000005631	lsm14b	91	47.264	Poecilia_formosa
ENSLACG00000003849	LSM14B	100	48.131	ENSPLAG00000002449	lsm14b	91	45.885	Poecilia_latipinna
ENSLACG00000003849	LSM14B	78	64.539	ENSPLAG00000005793	LSM14B	90	65.000	Poecilia_latipinna
ENSLACG00000003849	LSM14B	77	65.000	ENSPMEG00000022953	LSM14B	90	65.000	Poecilia_mexicana
ENSLACG00000003849	LSM14B	93	46.210	ENSPMEG00000000745	lsm14b	91	45.636	Poecilia_mexicana
ENSLACG00000003849	LSM14B	67	36.519	ENSPREG00000007828	LSM14B	86	37.729	Poecilia_reticulata
ENSLACG00000003849	LSM14B	99	61.702	ENSPPYG00000011194	LSM14B	99	62.175	Pongo_abelii
ENSLACG00000003849	LSM14B	99	68.000	ENSPCOG00000013625	LSM14B	99	68.000	Propithecus_coquereli
ENSLACG00000003849	LSM14B	83	59.280	ENSPVAG00000017918	LSM14B	71	83.333	Pteropus_vampyrus
ENSLACG00000003849	LSM14B	100	56.398	ENSPNAG00000012777	lsm14b	100	50.230	Pygocentrus_nattereri
ENSLACG00000003849	LSM14B	99	71.529	ENSRNOG00000054557	Lsm14b	99	71.294	Rattus_norvegicus
ENSLACG00000003849	LSM14B	90	69.171	ENSRBIG00000033461	LSM14B	99	68.653	Rhinopithecus_bieti
ENSLACG00000003849	LSM14B	92	65.561	ENSRROG00000042949	LSM14B	100	66.343	Rhinopithecus_roxellana
ENSLACG00000003849	LSM14B	90	64.675	ENSSBOG00000032820	LSM14B	100	64.416	Saimiri_boliviensis_boliviensis
ENSLACG00000003849	LSM14B	79	85.294	ENSSHAG00000015528	LSM14B	96	87.255	Sarcophilus_harrisii
ENSLACG00000003849	LSM14B	91	57.468	ENSSFOG00015004627	lsm14b	91	58.081	Scleropages_formosus
ENSLACG00000003849	LSM14B	100	47.404	ENSSMAG00000000135	LSM14B	92	65.468	Scophthalmus_maximus
ENSLACG00000003849	LSM14B	91	49.874	ENSSMAG00000012725	lsm14b	89	74.638	Scophthalmus_maximus
ENSLACG00000003849	LSM14B	78	76.087	ENSSDUG00000020977	lsm14b	89	76.087	Seriola_dumerili
ENSLACG00000003849	LSM14B	93	47.202	ENSSDUG00000022770	LSM14B	92	67.832	Seriola_dumerili
ENSLACG00000003849	LSM14B	65	40.484	ENSSLDG00000011354	-	89	39.404	Seriola_lalandi_dorsalis
ENSLACG00000003849	LSM14B	100	71.194	ENSSPUG00000014360	LSM14B	100	71.528	Sphenodon_punctatus
ENSLACG00000003849	LSM14B	91	51.538	ENSSPAG00000020915	lsm14b	89	75.352	Stegastes_partitus
ENSLACG00000003849	LSM14B	69	38.851	ENSSPAG00000018854	-	89	37.589	Stegastes_partitus
ENSLACG00000003849	LSM14B	99	71.294	ENSSSCG00000026052	LSM14B	100	66.990	Sus_scrofa
ENSLACG00000003849	LSM14B	91	66.067	ENSTGUG00000007884	LSM14B	100	66.581	Taeniopygia_guttata
ENSLACG00000003849	LSM14B	93	44.743	ENSTRUG00000001529	LSM14B	91	46.135	Takifugu_rubripes
ENSLACG00000003849	LSM14B	100	49.541	ENSTRUG00000011354	lsm14b	91	49.005	Takifugu_rubripes
ENSLACG00000003849	LSM14B	79	73.944	ENSTNIG00000002445	lsm14b	91	73.944	Tetraodon_nigroviridis
ENSLACG00000003849	LSM14B	85	89.744	ENSTTRG00000011043	LSM14B	99	50.827	Tursiops_truncatus
ENSLACG00000003849	LSM14B	98	65.632	ENSUAMG00000025298	LSM14B	99	70.677	Ursus_americanus
ENSLACG00000003849	LSM14B	98	65.632	ENSUMAG00000000480	LSM14B	99	70.677	Ursus_maritimus
ENSLACG00000003849	LSM14B	91	65.464	ENSVVUG00000015920	LSM14B	100	67.314	Vulpes_vulpes
ENSLACG00000003849	LSM14B	87	70.292	ENSXETG00000001997	lsm14b	100	71.968	Xenopus_tropicalis
ENSLACG00000003849	LSM14B	91	46.250	ENSXMAG00000010013	lsm14b	91	44.096	Xiphophorus_maculatus