EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000003900 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 959 bases
Position: chrJH129669.1:100759-101717
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004387	RVT_1	PF00078.27	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004425	-	879	-	ENSLACP00000004387	293 (aa)	-	H3A416

Gene Model

Click here to download ENSLACG00000003900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003900's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000003900	-	61	30.348	ENSLACG00000000714	-	91	30.348
ENSLACG00000003900	-	66	30.516	ENSLACG00000010373	-	83	30.516
ENSLACG00000003900	-	77	30.040	ENSLACG00000002249	-	94	30.040
ENSLACG00000003900	-	58	32.065	ENSLACG00000016284	-	83	30.978
ENSLACG00000003900	-	60	31.795	ENSLACG00000000029	-	52	31.795
ENSLACG00000003900	-	75	30.417	ENSLACG00000010227	-	97	30.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003900	-	99	48.903	ENSAPOG00000008925	-	88	48.903	Acanthochromis_polyacanthus
ENSLACG00000003900	-	86	39.785	ENSAPEG00000005752	-	76	38.700	Amphiprion_percula
ENSLACG00000003900	-	82	35.156	ENSACLG00000013289	-	73	35.156	Astatotilapia_calliptera
ENSLACG00000003900	-	100	35.913	ENSACLG00000001380	-	54	35.913	Astatotilapia_calliptera
ENSLACG00000003900	-	99	34.169	ENSACLG00000009861	-	64	34.169	Astatotilapia_calliptera
ENSLACG00000003900	-	82	34.926	ENSACLG00000010403	-	87	34.926	Astatotilapia_calliptera
ENSLACG00000003900	-	87	35.336	ENSACLG00000013847	-	64	35.336	Astatotilapia_calliptera
ENSLACG00000003900	-	100	34.985	ENSAMXG00000038502	-	65	34.985	Astyanax_mexicanus
ENSLACG00000003900	-	94	35.762	ENSAMXG00000031032	-	79	35.762	Astyanax_mexicanus
ENSLACG00000003900	-	99	32.188	ENSAMXG00000043469	-	68	32.188	Astyanax_mexicanus
ENSLACG00000003900	-	86	36.462	ENSAMXG00000039106	-	61	35.625	Astyanax_mexicanus
ENSLACG00000003900	-	100	32.298	ENSCPBG00000001119	-	70	32.609	Chrysemys_picta_bellii
ENSLACG00000003900	-	82	30.258	ENSCPBG00000001687	-	88	30.258	Chrysemys_picta_bellii
ENSLACG00000003900	-	82	31.227	ENSCVAG00000001415	-	70	31.227	Cyprinodon_variegatus
ENSLACG00000003900	-	82	32.103	ENSGAGG00000022131	-	88	32.103	Gopherus_agassizii
ENSLACG00000003900	-	99	34.579	ENSGAGG00000007173	-	50	34.579	Gopherus_agassizii
ENSLACG00000003900	-	95	34.853	ENSHBUG00000009088	-	83	34.853	Haplochromis_burtoni
ENSLACG00000003900	-	89	34.483	ENSHCOG00000019997	-	51	34.483	Hippocampus_comes
ENSLACG00000003900	-	97	32.595	ENSIPUG00000003645	-	64	32.595	Ictalurus_punctatus
ENSLACG00000003900	-	100	35.202	ENSKMAG00000007574	-	62	35.202	Kryptolebias_marmoratus
ENSLACG00000003900	-	100	49.375	ENSLBEG00000003912	-	82	49.375	Labrus_bergylta
ENSLACG00000003900	-	81	31.873	ENSLOCG00000017292	-	76	31.873	Lepisosteus_oculatus
ENSLACG00000003900	-	82	30.627	ENSMAMG00000004646	-	56	30.627	Mastacembelus_armatus
ENSLACG00000003900	-	100	32.919	ENSMAMG00000019918	-	52	32.919	Mastacembelus_armatus
ENSLACG00000003900	-	100	34.783	ENSMZEG00005023829	-	64	34.783	Maylandia_zebra
ENSLACG00000003900	-	89	31.010	ENSMALG00000005075	-	89	31.010	Monopterus_albus
ENSLACG00000003900	-	84	30.797	ENSMALG00000020245	-	99	30.797	Monopterus_albus
ENSLACG00000003900	-	94	33.115	ENSNBRG00000002791	-	98	33.115	Neolamprologus_brichardi
ENSLACG00000003900	-	100	36.957	ENSNBRG00000002477	-	94	36.957	Neolamprologus_brichardi
ENSLACG00000003900	-	87	33.798	ENSORLG00000023794	-	52	33.798	Oryzias_latipes
ENSLACG00000003900	-	67	35.071	ENSORLG00000026658	-	86	35.071	Oryzias_latipes
ENSLACG00000003900	-	97	33.119	ENSORLG00000027869	-	67	33.119	Oryzias_latipes
ENSLACG00000003900	-	100	36.196	ENSORLG00000027231	-	60	36.196	Oryzias_latipes
ENSLACG00000003900	-	95	35.161	ENSORLG00000022411	-	84	35.161	Oryzias_latipes
ENSLACG00000003900	-	92	31.544	ENSORLG00020021288	-	90	31.544	Oryzias_latipes_hni
ENSLACG00000003900	-	97	34.185	ENSORLG00020012706	-	78	34.185	Oryzias_latipes_hni
ENSLACG00000003900	-	82	30.855	ENSORLG00020002705	-	83	30.855	Oryzias_latipes_hni
ENSLACG00000003900	-	100	34.675	ENSORLG00020002002	-	50	34.675	Oryzias_latipes_hni
ENSLACG00000003900	-	100	33.022	ENSORLG00020009127	-	62	33.022	Oryzias_latipes_hni
ENSLACG00000003900	-	75	34.454	ENSORLG00020016252	-	61	34.454	Oryzias_latipes_hni
ENSLACG00000003900	-	100	32.407	ENSORLG00020016924	-	75	32.407	Oryzias_latipes_hni
ENSLACG00000003900	-	79	36.032	ENSORLG00020000154	-	60	36.032	Oryzias_latipes_hni
ENSLACG00000003900	-	85	38.182	ENSORLG00015021822	-	72	37.993	Oryzias_latipes_hsok
ENSLACG00000003900	-	100	31.481	ENSORLG00015008138	-	60	31.481	Oryzias_latipes_hsok
ENSLACG00000003900	-	81	34.661	ENSORLG00015009803	-	52	34.661	Oryzias_latipes_hsok
ENSLACG00000003900	-	99	34.700	ENSOMEG00000013073	-	50	34.700	Oryzias_melastigma
ENSLACG00000003900	-	82	30.566	ENSOMEG00000007764	-	89	30.566	Oryzias_melastigma
ENSLACG00000003900	-	99	33.333	ENSPKIG00000005406	-	53	33.333	Paramormyrops_kingsleyae
ENSLACG00000003900	-	86	37.410	ENSPKIG00000007140	-	73	36.646	Paramormyrops_kingsleyae
ENSLACG00000003900	-	77	31.837	ENSPKIG00000019619	-	85	31.837	Paramormyrops_kingsleyae
ENSLACG00000003900	-	58	30.526	ENSPSIG00000001531	-	98	30.526	Pelodiscus_sinensis
ENSLACG00000003900	-	67	38.028	ENSPSIG00000000007	-	53	38.028	Pelodiscus_sinensis
ENSLACG00000003900	-	100	32.716	ENSPSIG00000000193	-	63	32.716	Pelodiscus_sinensis
ENSLACG00000003900	-	79	31.746	ENSPSIG00000000367	-	56	31.746	Pelodiscus_sinensis
ENSLACG00000003900	-	99	32.508	ENSPSIG00000001197	-	77	32.508	Pelodiscus_sinensis
ENSLACG00000003900	-	87	33.684	ENSPSIG00000002033	-	86	33.684	Pelodiscus_sinensis
ENSLACG00000003900	-	78	31.984	ENSPSIG00000001800	-	54	31.984	Pelodiscus_sinensis
ENSLACG00000003900	-	100	30.368	ENSPSIG00000001205	-	68	30.368	Pelodiscus_sinensis
ENSLACG00000003900	-	87	32.867	ENSPMEG00000019465	-	63	32.867	Poecilia_mexicana
ENSLACG00000003900	-	97	32.803	ENSPMEG00000018862	-	62	32.803	Poecilia_mexicana
ENSLACG00000003900	-	81	35.039	ENSPREG00000022349	-	54	35.039	Poecilia_reticulata
ENSLACG00000003900	-	68	37.500	ENSPNYG00000004598	-	71	37.500	Pundamilia_nyererei
ENSLACG00000003900	-	99	31.875	ENSPNAG00000010299	-	62	31.875	Pygocentrus_nattereri
ENSLACG00000003900	-	99	32.198	ENSPNAG00000009058	-	63	32.198	Pygocentrus_nattereri
ENSLACG00000003900	-	86	35.357	ENSPNAG00000015949	-	71	35.357	Pygocentrus_nattereri
ENSLACG00000003900	-	66	32.536	ENSPNAG00000001979	-	80	32.536	Pygocentrus_nattereri
ENSLACG00000003900	-	92	32.107	ENSSFOG00015015399	-	84	32.107	Scleropages_formosus
ENSLACG00000003900	-	87	33.916	ENSSFOG00015016168	-	65	33.916	Scleropages_formosus
ENSLACG00000003900	-	100	35.604	ENSXMAG00000025957	-	56	35.604	Xiphophorus_maculatus
ENSLACG00000003900	-	98	32.075	ENSXMAG00000023507	-	61	32.075	Xiphophorus_maculatus