EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000003931 (Gene tree)
Gene ID: 102354614
Gene Symbol: POLR2F
Alias: HRBP14.4|RPB6
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 7084 bases
Position: chrJH127309.1:101958-109041
Accession: 102354614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004420	RNA_pol_Rpb6	PF01192.22	3.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004458	POLR2F-201	1784	XM_006001946	ENSLACP00000004420	127 (aa)	XP_006002008	H3A449

Gene Model

Click here to download ENSLACG00000003931's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03020	RNA polymerase	KEGG
lcm04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003931's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003931	POLR2F	100	94.488	ENSG00000100142	POLR2F	100	94.488	Homo_sapiens
ENSLACG00000003931	POLR2F	100	91.339	ENSAPOG00000002902	polr2f	100	91.339	Acanthochromis_polyacanthus
ENSLACG00000003931	POLR2F	100	93.701	ENSAMEG00000010331	POLR2F	100	93.701	Ailuropoda_melanoleuca
ENSLACG00000003931	POLR2F	100	91.339	ENSACIG00000000923	polr2f	100	91.339	Amphilophus_citrinellus
ENSLACG00000003931	POLR2F	100	92.126	ENSAOCG00000003182	polr2f	100	92.126	Amphiprion_ocellaris
ENSLACG00000003931	POLR2F	100	92.126	ENSAPEG00000012999	polr2f	100	92.126	Amphiprion_percula
ENSLACG00000003931	POLR2F	100	91.339	ENSATEG00000008929	polr2f	100	91.339	Anabas_testudineus
ENSLACG00000003931	POLR2F	80	94.059	ENSAPLG00000015235	POLR2F	85	92.453	Anas_platyrhynchos
ENSLACG00000003931	POLR2F	100	95.276	ENSACAG00000015288	POLR2F	100	95.276	Anolis_carolinensis
ENSLACG00000003931	POLR2F	100	94.488	ENSANAG00000020840	POLR2F	100	94.488	Aotus_nancymaae
ENSLACG00000003931	POLR2F	100	92.126	ENSACLG00000016129	polr2f	100	92.126	Astatotilapia_calliptera
ENSLACG00000003931	POLR2F	100	92.126	ENSAMXG00000012812	polr2f	100	92.126	Astyanax_mexicanus
ENSLACG00000003931	POLR2F	100	94.488	ENSBTAG00000004820	POLR2F	100	94.488	Bos_taurus
ENSLACG00000003931	POLR2F	63	77.500	WBGene00007355	rpb-6	76	66.667	Caenorhabditis_elegans
ENSLACG00000003931	POLR2F	100	94.488	ENSCJAG00000048241	POLR2F	100	94.488	Callithrix_jacchus
ENSLACG00000003931	POLR2F	100	93.701	ENSCAFG00000001437	POLR2F	100	93.701	Canis_familiaris
ENSLACG00000003931	POLR2F	83	93.396	ENSCHIG00000012907	POLR2F	83	93.396	Capra_hircus
ENSLACG00000003931	POLR2F	100	93.701	ENSTSYG00000008187	POLR2F	100	93.701	Carlito_syrichta
ENSLACG00000003931	POLR2F	83	93.396	ENSCAPG00000013419	POLR2F	83	93.396	Cavia_aperea
ENSLACG00000003931	POLR2F	100	94.488	ENSCPOG00000034094	POLR2F	100	94.488	Cavia_porcellus
ENSLACG00000003931	POLR2F	100	94.488	ENSCCAG00000036489	POLR2F	100	94.488	Cebus_capucinus
ENSLACG00000003931	POLR2F	100	94.488	ENSCATG00000041014	POLR2F	100	94.488	Cercocebus_atys
ENSLACG00000003931	POLR2F	100	94.488	ENSCLAG00000017167	POLR2F	100	94.488	Chinchilla_lanigera
ENSLACG00000003931	POLR2F	100	94.488	ENSCSAG00000006862	POLR2F	100	94.488	Chlorocebus_sabaeus
ENSLACG00000003931	POLR2F	83	94.340	ENSCPBG00000023030	POLR2F	54	94.340	Chrysemys_picta_bellii
ENSLACG00000003931	POLR2F	81	76.923	ENSCING00000019359	-	71	78.000	Ciona_intestinalis
ENSLACG00000003931	POLR2F	100	94.488	ENSCANG00000041884	POLR2F	100	94.488	Colobus_angolensis_palliatus
ENSLACG00000003931	POLR2F	100	94.488	ENSCGRG00001023541	POLR2F	100	94.488	Cricetulus_griseus_chok1gshd
ENSLACG00000003931	POLR2F	100	94.488	ENSCGRG00000011921	POLR2F	100	94.488	Cricetulus_griseus_crigri
ENSLACG00000003931	POLR2F	83	93.396	ENSCSEG00000006848	polr2f	83	93.396	Cynoglossus_semilaevis
ENSLACG00000003931	POLR2F	100	90.551	ENSCVAG00000010437	polr2f	100	90.551	Cyprinodon_variegatus
ENSLACG00000003931	POLR2F	100	89.764	ENSDARG00000036625	polr2f	100	89.764	Danio_rerio
ENSLACG00000003931	POLR2F	100	94.488	ENSDNOG00000005884	POLR2F	100	94.488	Dasypus_novemcinctus
ENSLACG00000003931	POLR2F	100	94.488	ENSDORG00000024789	Polr2f	100	94.488	Dipodomys_ordii
ENSLACG00000003931	POLR2F	78	72.549	FBgn0003275	RpII18	82	72.897	Drosophila_melanogaster
ENSLACG00000003931	POLR2F	79	65.000	ENSEBUG00000002842	-	90	63.462	Eptatretus_burgeri
ENSLACG00000003931	POLR2F	56	83.099	ENSEBUG00000008509	polr2f	73	83.099	Eptatretus_burgeri
ENSLACG00000003931	POLR2F	66	90.476	ENSEASG00005018802	-	76	90.476	Equus_asinus_asinus
ENSLACG00000003931	POLR2F	100	92.126	ENSEEUG00000011014	POLR2F	100	92.126	Erinaceus_europaeus
ENSLACG00000003931	POLR2F	100	88.976	ENSELUG00000000319	polr2f	100	88.976	Esox_lucius
ENSLACG00000003931	POLR2F	100	93.701	ENSFCAG00000002806	POLR2F	100	93.701	Felis_catus
ENSLACG00000003931	POLR2F	100	94.488	ENSFDAG00000009926	POLR2F	100	94.488	Fukomys_damarensis
ENSLACG00000003931	POLR2F	88	92.857	ENSFHEG00000005448	polr2f	84	93.396	Fundulus_heteroclitus
ENSLACG00000003931	POLR2F	100	85.827	ENSGMOG00000009967	polr2f	100	85.827	Gadus_morhua
ENSLACG00000003931	POLR2F	100	93.701	ENSGALG00000012291	POLR2F	100	93.701	Gallus_gallus
ENSLACG00000003931	POLR2F	100	89.764	ENSGAFG00000017573	polr2f	100	89.764	Gambusia_affinis
ENSLACG00000003931	POLR2F	100	88.976	ENSGACG00000007322	polr2f	100	88.976	Gasterosteus_aculeatus
ENSLACG00000003931	POLR2F	100	95.276	ENSGAGG00000021757	POLR2F	100	95.276	Gopherus_agassizii
ENSLACG00000003931	POLR2F	100	94.488	ENSGGOG00000005213	POLR2F	100	94.488	Gorilla_gorilla
ENSLACG00000003931	POLR2F	100	92.126	ENSHBUG00000022089	polr2f	100	92.126	Haplochromis_burtoni
ENSLACG00000003931	POLR2F	100	94.488	ENSHGLG00000018942	POLR2F	100	94.488	Heterocephalus_glaber_female
ENSLACG00000003931	POLR2F	100	94.488	ENSHGLG00100012851	POLR2F	100	94.488	Heterocephalus_glaber_male
ENSLACG00000003931	POLR2F	100	88.976	ENSHCOG00000006149	polr2f	100	88.976	Hippocampus_comes
ENSLACG00000003931	POLR2F	76	95.876	ENSIPUG00000000814	polr2f	100	95.876	Ictalurus_punctatus
ENSLACG00000003931	POLR2F	100	94.488	ENSSTOG00000025722	POLR2F	100	94.488	Ictidomys_tridecemlineatus
ENSLACG00000003931	POLR2F	100	94.488	ENSJJAG00000008097	Polr2f	100	94.488	Jaculus_jaculus
ENSLACG00000003931	POLR2F	100	93.701	ENSKMAG00000014230	polr2f	100	93.701	Kryptolebias_marmoratus
ENSLACG00000003931	POLR2F	83	91.509	ENSLBEG00000008383	polr2f	88	91.509	Labrus_bergylta
ENSLACG00000003931	POLR2F	100	90.769	ENSLOCG00000011827	polr2f	100	90.769	Lepisosteus_oculatus
ENSLACG00000003931	POLR2F	100	94.488	ENSLAFG00000012632	POLR2F	100	94.488	Loxodonta_africana
ENSLACG00000003931	POLR2F	100	94.488	ENSMFAG00000033687	POLR2F	100	94.488	Macaca_fascicularis
ENSLACG00000003931	POLR2F	83	93.396	ENSMMUG00000038231	POLR2F	87	93.396	Macaca_mulatta
ENSLACG00000003931	POLR2F	100	94.488	ENSMNEG00000044365	POLR2F	100	94.488	Macaca_nemestrina
ENSLACG00000003931	POLR2F	100	94.488	ENSMLEG00000033077	POLR2F	100	94.488	Mandrillus_leucophaeus
ENSLACG00000003931	POLR2F	100	92.126	ENSMAMG00000008056	polr2f	100	92.126	Mastacembelus_armatus
ENSLACG00000003931	POLR2F	100	92.126	ENSMZEG00005005705	polr2f	100	92.126	Maylandia_zebra
ENSLACG00000003931	POLR2F	100	93.701	ENSMGAG00000012504	POLR2F	100	93.701	Meleagris_gallopavo
ENSLACG00000003931	POLR2F	100	94.488	ENSMAUG00000018586	Polr2f	100	94.488	Mesocricetus_auratus
ENSLACG00000003931	POLR2F	100	94.488	ENSMICG00000013128	POLR2F	100	94.488	Microcebus_murinus
ENSLACG00000003931	POLR2F	100	94.488	ENSMOCG00000000237	Polr2f	100	94.488	Microtus_ochrogaster
ENSLACG00000003931	POLR2F	100	92.126	ENSMMOG00000005106	polr2f	100	92.126	Mola_mola
ENSLACG00000003931	POLR2F	100	93.701	ENSMODG00000019063	POLR2F	100	93.701	Monodelphis_domestica
ENSLACG00000003931	POLR2F	100	91.339	ENSMALG00000001444	polr2f	100	91.339	Monopterus_albus
ENSLACG00000003931	POLR2F	100	93.701	MGP_CAROLIEiJ_G0020006	Polr2f	100	93.701	Mus_caroli
ENSLACG00000003931	POLR2F	100	93.701	ENSMUSG00000033020	Polr2f	100	93.701	Mus_musculus
ENSLACG00000003931	POLR2F	100	93.701	MGP_PahariEiJ_G0020008	Polr2f	100	93.701	Mus_pahari
ENSLACG00000003931	POLR2F	100	93.701	MGP_SPRETEiJ_G0020904	Polr2f	100	93.701	Mus_spretus
ENSLACG00000003931	POLR2F	100	93.701	ENSMPUG00000012997	POLR2F	100	93.701	Mustela_putorius_furo
ENSLACG00000003931	POLR2F	98	87.903	ENSMLUG00000029612	-	98	87.903	Myotis_lucifugus
ENSLACG00000003931	POLR2F	100	92.248	ENSMLUG00000014315	-	100	92.248	Myotis_lucifugus
ENSLACG00000003931	POLR2F	100	94.488	ENSNGAG00000020682	Polr2f	100	94.488	Nannospalax_galili
ENSLACG00000003931	POLR2F	100	91.339	ENSNBRG00000002492	polr2f	100	91.339	Neolamprologus_brichardi
ENSLACG00000003931	POLR2F	100	94.488	ENSNLEG00000014987	-	100	94.488	Nomascus_leucogenys
ENSLACG00000003931	POLR2F	100	94.488	ENSODEG00000014123	POLR2F	100	94.488	Octodon_degus
ENSLACG00000003931	POLR2F	100	91.339	ENSONIG00000008394	polr2f	100	91.339	Oreochromis_niloticus
ENSLACG00000003931	POLR2F	100	95.276	ENSOANG00000014684	POLR2F	100	95.276	Ornithorhynchus_anatinus
ENSLACG00000003931	POLR2F	100	94.488	ENSOCUG00000012064	POLR2F	100	94.488	Oryctolagus_cuniculus
ENSLACG00000003931	POLR2F	100	89.764	ENSORLG00000014580	polr2f	100	89.764	Oryzias_latipes
ENSLACG00000003931	POLR2F	100	90.551	ENSORLG00020006910	polr2f	100	90.551	Oryzias_latipes_hni
ENSLACG00000003931	POLR2F	94	85.000	ENSORLG00015015332	polr2f	77	88.596	Oryzias_latipes_hsok
ENSLACG00000003931	POLR2F	80	88.235	ENSOMEG00000006530	polr2f	65	82.727	Oryzias_melastigma
ENSLACG00000003931	POLR2F	100	94.488	ENSOGAG00000025463	POLR2F	100	94.488	Otolemur_garnettii
ENSLACG00000003931	POLR2F	100	94.488	ENSOARG00000014692	POLR2F	100	94.488	Ovis_aries
ENSLACG00000003931	POLR2F	100	94.488	ENSPPAG00000024276	POLR2F	100	94.488	Pan_paniscus
ENSLACG00000003931	POLR2F	100	93.701	ENSPPRG00000013030	POLR2F	100	93.701	Panthera_pardus
ENSLACG00000003931	POLR2F	82	91.346	ENSPTIG00000000632	POLR2F	85	91.346	Panthera_tigris_altaica
ENSLACG00000003931	POLR2F	100	94.488	ENSPTRG00000014356	POLR2F	100	94.488	Pan_troglodytes
ENSLACG00000003931	POLR2F	100	94.488	ENSPANG00000023979	POLR2F	100	94.488	Papio_anubis
ENSLACG00000003931	POLR2F	100	92.126	ENSPKIG00000002464	polr2f	100	92.126	Paramormyrops_kingsleyae
ENSLACG00000003931	POLR2F	56	98.592	ENSPSIG00000013913	POLR2F	100	98.592	Pelodiscus_sinensis
ENSLACG00000003931	POLR2F	100	92.126	ENSPMGG00000009619	polr2f	100	92.126	Periophthalmus_magnuspinnatus
ENSLACG00000003931	POLR2F	100	94.488	ENSPEMG00000008322	Polr2f	100	94.488	Peromyscus_maniculatus_bairdii
ENSLACG00000003931	POLR2F	100	93.701	ENSPCIG00000012000	-	100	93.701	Phascolarctos_cinereus
ENSLACG00000003931	POLR2F	100	90.551	ENSPFOG00000000139	polr2f	100	90.551	Poecilia_formosa
ENSLACG00000003931	POLR2F	100	90.551	ENSPLAG00000000988	polr2f	100	90.551	Poecilia_latipinna
ENSLACG00000003931	POLR2F	100	90.551	ENSPMEG00000019063	polr2f	100	90.551	Poecilia_mexicana
ENSLACG00000003931	POLR2F	77	90.816	ENSPREG00000016749	polr2f	100	90.816	Poecilia_reticulata
ENSLACG00000003931	POLR2F	100	94.488	ENSPPYG00000011809	POLR2F	100	94.488	Pongo_abelii
ENSLACG00000003931	POLR2F	100	94.488	ENSPCOG00000025716	POLR2F	100	94.488	Propithecus_coquereli
ENSLACG00000003931	POLR2F	79	92.000	ENSPVAG00000010107	POLR2F	64	92.000	Pteropus_vampyrus
ENSLACG00000003931	POLR2F	100	92.126	ENSPNYG00000019790	polr2f	100	92.126	Pundamilia_nyererei
ENSLACG00000003931	POLR2F	100	92.913	ENSPNAG00000009017	polr2f	100	92.913	Pygocentrus_nattereri
ENSLACG00000003931	POLR2F	100	93.701	ENSRNOG00000011214	Polr2f	100	93.701	Rattus_norvegicus
ENSLACG00000003931	POLR2F	100	94.488	ENSRBIG00000044878	POLR2F	100	94.488	Rhinopithecus_bieti
ENSLACG00000003931	POLR2F	100	94.488	ENSRROG00000019586	POLR2F	100	94.488	Rhinopithecus_roxellana
ENSLACG00000003931	POLR2F	100	94.488	ENSSBOG00000023340	POLR2F	100	94.488	Saimiri_boliviensis_boliviensis
ENSLACG00000003931	POLR2F	100	93.701	ENSSHAG00000008502	POLR2F	100	93.701	Sarcophilus_harrisii
ENSLACG00000003931	POLR2F	100	92.913	ENSSFOG00015012810	polr2f	100	92.913	Scleropages_formosus
ENSLACG00000003931	POLR2F	100	92.913	ENSSMAG00000005354	polr2f	100	92.913	Scophthalmus_maximus
ENSLACG00000003931	POLR2F	100	92.126	ENSSDUG00000016273	polr2f	100	92.126	Seriola_dumerili
ENSLACG00000003931	POLR2F	100	92.126	ENSSLDG00000024895	polr2f	100	92.126	Seriola_lalandi_dorsalis
ENSLACG00000003931	POLR2F	100	95.276	ENSSPUG00000011343	POLR2F	100	95.276	Sphenodon_punctatus
ENSLACG00000003931	POLR2F	100	92.126	ENSSPAG00000019646	polr2f	100	92.126	Stegastes_partitus
ENSLACG00000003931	POLR2F	100	93.701	ENSSSCG00000000116	POLR2F	100	93.701	Sus_scrofa
ENSLACG00000003931	POLR2F	80	95.050	ENSTGUG00000010476	POLR2F	93	94.488	Taeniopygia_guttata
ENSLACG00000003931	POLR2F	65	91.463	ENSTGUG00000016504	-	93	91.463	Taeniopygia_guttata
ENSLACG00000003931	POLR2F	100	91.339	ENSTRUG00000021130	polr2f	71	91.339	Takifugu_rubripes
ENSLACG00000003931	POLR2F	100	92.126	ENSTNIG00000010827	polr2f	100	92.126	Tetraodon_nigroviridis
ENSLACG00000003931	POLR2F	79	92.000	ENSTTRG00000004817	POLR2F	64	92.000	Tursiops_truncatus
ENSLACG00000003931	POLR2F	100	93.701	ENSUAMG00000020504	POLR2F	100	93.701	Ursus_americanus
ENSLACG00000003931	POLR2F	100	93.701	ENSUMAG00000015052	POLR2F	100	93.701	Ursus_maritimus
ENSLACG00000003931	POLR2F	83	92.453	ENSVVUG00000024021	POLR2F	80	92.453	Vulpes_vulpes
ENSLACG00000003931	POLR2F	100	96.850	ENSXETG00000006346	polr2f	100	96.850	Xenopus_tropicalis
ENSLACG00000003931	POLR2F	100	90.551	ENSXCOG00000015983	polr2f	100	90.551	Xiphophorus_couchianus
ENSLACG00000003931	POLR2F	100	90.551	ENSXMAG00000001559	polr2f	100	90.551	Xiphophorus_maculatus