EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLACG00000003948 (Gene tree)
Gene ID
102356288
Gene Symbol
si:dkey-37o8.1
Alias
-
Full Name
elongation factor 1-alpha-like
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Minus strand
Length
14163 bases
Position
chrJH126694.1:102618-116780
Accession
102356288
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000004439GTP_EFTUPF00009.275e-5411
ENSLACP00000004439MMR_HSR1PF01926.235.1e-0711
ENSLACP00000004439GTP_EFTU_D2PF03144.259.9e-1211
ENSLACP00000004439GTP_EFTU_D3PF03143.175.6e-3411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000004477-2022XM_005992647ENSLACP00000004439460 (aa)XP_005992709H3A468
Gene Model
Click here to download ENSLACG00000003948's gene model file
Pathways
Pathway IDPathway NameSource
lcm03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003948's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLACG00000003948si:dkey-37o8.18440.052ENSLACG00000004528HBS1L7740.052
ENSLACG00000003948si:dkey-37o8.19873.556ENSLACG00000015342eef1a1l19573.556
ENSLACG00000003948si:dkey-37o8.18771.642ENSLACG00000015392-10070.944
ENSLACG00000003948si:dkey-37o8.19960.738ENSLACG00000004296EEF1A29760.738
ENSLACG00000003948si:dkey-37o8.19870.217ENSLACG00000002952-10070.217
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000003948si:dkey-37o8.19677.652ENSAPOG00000016459si:dkey-37o8.19777.652Acanthochromis_polyacanthus
ENSLACG00000003948si:dkey-37o8.19573.684ENSACIG00000020985si:dkey-37o8.18273.684Amphilophus_citrinellus
ENSLACG00000003948si:dkey-37o8.19975.991ENSAOCG00000002663si:dkey-37o8.19975.991Amphiprion_ocellaris
ENSLACG00000003948si:dkey-37o8.19975.991ENSAPEG00000012670si:dkey-37o8.19975.991Amphiprion_percula
ENSLACG00000003948si:dkey-37o8.19277.251ENSATEG00000002217si:dkey-37o8.19977.251Anabas_testudineus
ENSLACG00000003948si:dkey-37o8.19677.201ENSACLG00000003519si:dkey-37o8.19777.201Astatotilapia_calliptera
ENSLACG00000003948si:dkey-37o8.19978.681ENSAMXG00000002728si:dkey-37o8.19978.681Astyanax_mexicanus
ENSLACG00000003948si:dkey-37o8.19978.194ENSCPBG00000020570-9077.899Chrysemys_picta_bellii
ENSLACG00000003948si:dkey-37o8.19871.302ENSCSEG00000019807si:dkey-37o8.19771.333Cynoglossus_semilaevis
ENSLACG00000003948si:dkey-37o8.19975.330ENSCVAG00000009828si:dkey-37o8.19975.330Cyprinodon_variegatus
ENSLACG00000003948si:dkey-37o8.19977.143ENSDARG00000071727si:dkey-37o8.19477.143Danio_rerio
ENSLACG00000003948si:dkey-37o8.19977.802ENSELUG00000007495si:dkey-37o8.19977.802Esox_lucius
ENSLACG00000003948si:dkey-37o8.19975.991ENSFHEG00000017452si:dkey-37o8.19975.991Fundulus_heteroclitus
ENSLACG00000003948si:dkey-37o8.19972.026ENSGMOG00000006122si:dkey-37o8.110072.026Gadus_morhua
ENSLACG00000003948si:dkey-37o8.19771.622ENSGAFG00000000367si:dkey-37o8.19971.622Gambusia_affinis
ENSLACG00000003948si:dkey-37o8.19974.670ENSGACG00000004505si:dkey-37o8.19974.670Gasterosteus_aculeatus
ENSLACG00000003948si:dkey-37o8.19978.556ENSGAGG00000007724-9879.439Gopherus_agassizii
ENSLACG00000003948si:dkey-37o8.19677.427ENSHBUG00000015515si:dkey-37o8.19777.427Haplochromis_burtoni
ENSLACG00000003948si:dkey-37o8.19770.495ENSHCOG00000001215si:dkey-37o8.19870.495Hippocampus_comes
ENSLACG00000003948si:dkey-37o8.19977.363ENSIPUG00000004067si:dkey-37o8.19977.363Ictalurus_punctatus
ENSLACG00000003948si:dkey-37o8.19974.449ENSKMAG00000015910si:dkey-37o8.19974.449Kryptolebias_marmoratus
ENSLACG00000003948si:dkey-37o8.19976.211ENSLBEG00000021334si:dkey-37o8.19076.211Labrus_bergylta
ENSLACG00000003948si:dkey-37o8.19978.431ENSLOCG00000011245si:dkey-37o8.110078.431Lepisosteus_oculatus
ENSLACG00000003948si:dkey-37o8.19669.526ENSMAMG00000009907si:dkey-37o8.19369.526Mastacembelus_armatus
ENSLACG00000003948si:dkey-37o8.19677.201ENSMZEG00005018358si:dkey-37o8.19777.201Maylandia_zebra
ENSLACG00000003948si:dkey-37o8.19676.072ENSMMOG00000004111si:dkey-37o8.19874.528Mola_mola
ENSLACG00000003948si:dkey-37o8.19573.973ENSMALG00000017152si:dkey-37o8.19973.973Monopterus_albus
ENSLACG00000003948si:dkey-37o8.19677.201ENSNBRG00000013552si:dkey-37o8.19777.201Neolamprologus_brichardi
ENSLACG00000003948si:dkey-37o8.19676.749ENSONIG00000006165si:dkey-37o8.19776.749Oreochromis_niloticus
ENSLACG00000003948si:dkey-37o8.19875.610ENSORLG00000019066si:dkey-37o8.19975.610Oryzias_latipes
ENSLACG00000003948si:dkey-37o8.19875.610ENSORLG00020008094si:dkey-37o8.19975.610Oryzias_latipes_hni
ENSLACG00000003948si:dkey-37o8.19875.166ENSORLG00015008410si:dkey-37o8.19975.166Oryzias_latipes_hsok
ENSLACG00000003948si:dkey-37o8.19776.549ENSOMEG00000001868si:dkey-37o8.19976.549Oryzias_melastigma
ENSLACG00000003948si:dkey-37o8.19778.475ENSPKIG00000017246si:dkey-37o8.19778.475Paramormyrops_kingsleyae
ENSLACG00000003948si:dkey-37o8.15974.194ENSPSIG00000008080-9874.194Pelodiscus_sinensis
ENSLACG00000003948si:dkey-37o8.19975.551ENSPFOG00000013173si:dkey-37o8.19975.551Poecilia_formosa
ENSLACG00000003948si:dkey-37o8.19974.890ENSPLAG00000010405si:dkey-37o8.19974.890Poecilia_latipinna
ENSLACG00000003948si:dkey-37o8.19975.771ENSPMEG00000015233si:dkey-37o8.19975.771Poecilia_mexicana
ENSLACG00000003948si:dkey-37o8.19874.945ENSPREG00000006280si:dkey-37o8.19974.945Poecilia_reticulata
ENSLACG00000003948si:dkey-37o8.19676.975ENSPNYG00000002059si:dkey-37o8.19776.975Pundamilia_nyererei
ENSLACG00000003948si:dkey-37o8.19679.458ENSPNAG00000009990si:dkey-37o8.19779.458Pygocentrus_nattereri
ENSLACG00000003948si:dkey-37o8.19681.264ENSSFOG00015019070si:dkey-37o8.19781.264Scleropages_formosus
ENSLACG00000003948si:dkey-37o8.19677.652ENSSMAG00000016143si:dkey-37o8.19777.652Scophthalmus_maximus
ENSLACG00000003948si:dkey-37o8.19677.652ENSSDUG00000009163si:dkey-37o8.19777.652Seriola_dumerili
ENSLACG00000003948si:dkey-37o8.19677.878ENSSLDG00000023761si:dkey-37o8.19777.878Seriola_lalandi_dorsalis
ENSLACG00000003948si:dkey-37o8.19974.620ENSSPUG00000007467-9975.276Sphenodon_punctatus
ENSLACG00000003948si:dkey-37o8.19678.104ENSSPAG00000013856si:dkey-37o8.19778.104Stegastes_partitus
ENSLACG00000003948si:dkey-37o8.19676.364ENSTRUG00000009006si:dkey-37o8.19876.364Takifugu_rubripes
ENSLACG00000003948si:dkey-37o8.19676.298ENSTNIG00000017138si:dkey-37o8.19576.298Tetraodon_nigroviridis
ENSLACG00000003948si:dkey-37o8.19978.242ENSXETG0000001774442Sp509878.242Xenopus_tropicalis
ENSLACG00000003948si:dkey-37o8.19874.723ENSXCOG00000012296si:dkey-37o8.19880.220Xiphophorus_couchianus
ENSLACG00000003948si:dkey-37o8.19974.890ENSXMAG00000001998si:dkey-37o8.19974.890Xiphophorus_maculatus

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