EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000003958 (Gene tree)
Gene ID: 102351903
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 26568 bases
Position: chrJH128638.1:102725-129292
Accession: 102351903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004448	zf-U11-48K	PF05253.12	3.2e-08	1	1
ENSLACP00000022865	zf-U11-48K	PF05253.12	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000025792	SNRNP48-201	1885	XM_006009580	ENSLACP00000022865	344 (aa)	XP_006009642	M3XJF9
ENSLACT00000004487	SNRNP48-202	1023	-	ENSLACP00000004448	341 (aa)	-	H3A477

Gene Model

Click here to download ENSLACG00000003958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003958's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003958	SNRNP48	98	52.187	ENSG00000168566	SNRNP48	96	53.593	Homo_sapiens
ENSLACG00000003958	SNRNP48	83	51.220	ENSAPOG00000021430	snrnp48	91	48.503	Acanthochromis_polyacanthus
ENSLACG00000003958	SNRNP48	98	51.906	ENSAMEG00000017349	SNRNP48	96	52.507	Ailuropoda_melanoleuca
ENSLACG00000003958	SNRNP48	89	49.196	ENSACIG00000002032	snrnp48	94	46.307	Amphilophus_citrinellus
ENSLACG00000003958	SNRNP48	83	50.871	ENSAOCG00000010562	snrnp48	91	48.204	Amphiprion_ocellaris
ENSLACG00000003958	SNRNP48	83	49.823	ENSAPEG00000003231	snrnp48	91	48.297	Amphiprion_percula
ENSLACG00000003958	SNRNP48	74	52.778	ENSATEG00000020210	snrnp48	99	47.989	Anabas_testudineus
ENSLACG00000003958	SNRNP48	88	57.285	ENSACAG00000002811	SNRNP48	91	57.285	Anolis_carolinensis
ENSLACG00000003958	SNRNP48	98	53.061	ENSANAG00000033538	SNRNP48	96	54.491	Aotus_nancymaae
ENSLACG00000003958	SNRNP48	94	47.840	ENSAMXG00000015309	snrnp48	92	47.840	Astyanax_mexicanus
ENSLACG00000003958	SNRNP48	94	53.211	ENSBTAG00000001123	SNRNP48	96	53.636	Bos_taurus
ENSLACG00000003958	SNRNP48	98	52.478	ENSCJAG00000021330	SNRNP48	96	53.892	Callithrix_jacchus
ENSLACG00000003958	SNRNP48	98	52.187	ENSCAFG00000009574	SNRNP48	85	51.714	Canis_familiaris
ENSLACG00000003958	SNRNP48	98	52.478	ENSCAFG00020013203	SNRNP48	96	53.593	Canis_lupus_dingo
ENSLACG00000003958	SNRNP48	94	53.517	ENSCHIG00000015216	SNRNP48	96	53.939	Capra_hircus
ENSLACG00000003958	SNRNP48	98	50.292	ENSTSYG00000000698	SNRNP48	96	52.395	Carlito_syrichta
ENSLACG00000003958	SNRNP48	91	52.830	ENSCAPG00000006768	SNRNP48	99	53.871	Cavia_aperea
ENSLACG00000003958	SNRNP48	98	52.339	ENSCPOG00000007910	SNRNP48	96	53.293	Cavia_porcellus
ENSLACG00000003958	SNRNP48	99	51.594	ENSCCAG00000035652	SNRNP48	98	53.412	Cebus_capucinus
ENSLACG00000003958	SNRNP48	98	52.187	ENSCATG00000033947	SNRNP48	96	53.593	Cercocebus_atys
ENSLACG00000003958	SNRNP48	99	51.594	ENSCLAG00000003765	SNRNP48	98	52.819	Chinchilla_lanigera
ENSLACG00000003958	SNRNP48	98	53.061	ENSCSAG00000007409	SNRNP48	96	54.192	Chlorocebus_sabaeus
ENSLACG00000003958	SNRNP48	88	58.766	ENSCPBG00000019146	SNRNP48	91	60.269	Chrysemys_picta_bellii
ENSLACG00000003958	SNRNP48	68	30.290	ENSCING00000004121	-	69	30.290	Ciona_intestinalis
ENSLACG00000003958	SNRNP48	98	52.770	ENSCANG00000030017	SNRNP48	96	54.192	Colobus_angolensis_palliatus
ENSLACG00000003958	SNRNP48	99	52.035	ENSCGRG00001001076	-	98	53.134	Cricetulus_griseus_chok1gshd
ENSLACG00000003958	SNRNP48	93	41.975	ENSCGRG00001008805	-	92	43.770	Cricetulus_griseus_chok1gshd
ENSLACG00000003958	SNRNP48	99	52.035	ENSCGRG00000007781	Snrnp48	98	53.134	Cricetulus_griseus_crigri
ENSLACG00000003958	SNRNP48	75	50.584	ENSCSEG00000000722	snrnp48	91	45.536	Cynoglossus_semilaevis
ENSLACG00000003958	SNRNP48	96	48.943	ENSCVAG00000019829	snrnp48	83	47.147	Cyprinodon_variegatus
ENSLACG00000003958	SNRNP48	85	49.147	ENSDARG00000039989	snrnp48	93	48.485	Danio_rerio
ENSLACG00000003958	SNRNP48	98	52.326	ENSDNOG00000014978	SNRNP48	96	53.731	Dasypus_novemcinctus
ENSLACG00000003958	SNRNP48	96	52.959	ENSDORG00000015140	Snrnp48	94	54.154	Dipodomys_ordii
ENSLACG00000003958	SNRNP48	98	52.187	ENSEASG00005012021	SNRNP48	95	53.939	Equus_asinus_asinus
ENSLACG00000003958	SNRNP48	98	52.478	ENSECAG00000026937	SNRNP48	96	53.593	Equus_caballus
ENSLACG00000003958	SNRNP48	98	40.351	ENSEEUG00000015437	SNRNP48	96	41.141	Erinaceus_europaeus
ENSLACG00000003958	SNRNP48	90	51.290	ENSELUG00000009766	snrnp48	93	49.138	Esox_lucius
ENSLACG00000003958	SNRNP48	98	53.061	ENSFCAG00000018853	SNRNP48	96	54.192	Felis_catus
ENSLACG00000003958	SNRNP48	94	55.385	ENSFALG00000007797	SNRNP48	98	55.692	Ficedula_albicollis
ENSLACG00000003958	SNRNP48	98	52.464	ENSFDAG00000009231	SNRNP48	95	53.636	Fukomys_damarensis
ENSLACG00000003958	SNRNP48	60	56.098	ENSFHEG00000014647	snrnp48	92	51.254	Fundulus_heteroclitus
ENSLACG00000003958	SNRNP48	74	49.206	ENSGMOG00000018599	-	99	44.681	Gadus_morhua
ENSLACG00000003958	SNRNP48	80	60.650	ENSGALG00000013005	SNRNP48	91	60.650	Gallus_gallus
ENSLACG00000003958	SNRNP48	80	52.381	ENSGAFG00000021639	snrnp48	97	47.688	Gambusia_affinis
ENSLACG00000003958	SNRNP48	73	55.200	ENSGACG00000017756	-	94	50.926	Gasterosteus_aculeatus
ENSLACG00000003958	SNRNP48	87	58.361	ENSGAGG00000000865	SNRNP48	97	58.361	Gopherus_agassizii
ENSLACG00000003958	SNRNP48	98	52.478	ENSGGOG00000013220	SNRNP48	96	53.892	Gorilla_gorilla
ENSLACG00000003958	SNRNP48	73	51.600	ENSHBUG00000017066	snrnp48	88	47.273	Haplochromis_burtoni
ENSLACG00000003958	SNRNP48	98	52.339	ENSHGLG00000015241	SNRNP48	95	53.939	Heterocephalus_glaber_female
ENSLACG00000003958	SNRNP48	98	52.339	ENSHGLG00100010027	SNRNP48	95	53.939	Heterocephalus_glaber_male
ENSLACG00000003958	SNRNP48	73	51.600	ENSHCOG00000014066	snrnp48	97	47.181	Hippocampus_comes
ENSLACG00000003958	SNRNP48	99	52.601	ENSSTOG00000014635	SNRNP48	98	53.709	Ictidomys_tridecemlineatus
ENSLACG00000003958	SNRNP48	95	53.659	ENSJJAG00000011495	Snrnp48	95	53.659	Jaculus_jaculus
ENSLACG00000003958	SNRNP48	93	47.649	ENSKMAG00000016514	snrnp48	96	47.126	Kryptolebias_marmoratus
ENSLACG00000003958	SNRNP48	78	51.698	ENSLBEG00000026249	snrnp48	91	48.955	Labrus_bergylta
ENSLACG00000003958	SNRNP48	87	56.000	ENSLOCG00000004187	snrnp48	96	53.488	Lepisosteus_oculatus
ENSLACG00000003958	SNRNP48	98	53.353	ENSLAFG00000011152	SNRNP48	96	55.224	Loxodonta_africana
ENSLACG00000003958	SNRNP48	98	52.770	ENSMFAG00000045216	SNRNP48	96	54.192	Macaca_fascicularis
ENSLACG00000003958	SNRNP48	98	52.770	ENSMMUG00000014785	SNRNP48	96	54.192	Macaca_mulatta
ENSLACG00000003958	SNRNP48	98	52.770	ENSMNEG00000042269	SNRNP48	96	54.192	Macaca_nemestrina
ENSLACG00000003958	SNRNP48	98	52.770	ENSMLEG00000034004	SNRNP48	96	54.192	Mandrillus_leucophaeus
ENSLACG00000003958	SNRNP48	75	53.101	ENSMAMG00000018673	snrnp48	79	50.633	Mastacembelus_armatus
ENSLACG00000003958	SNRNP48	85	60.000	ENSMGAG00000006037	SNRNP48	99	60.269	Meleagris_gallopavo
ENSLACG00000003958	SNRNP48	99	51.603	ENSMAUG00000011944	Snrnp48	98	52.695	Mesocricetus_auratus
ENSLACG00000003958	SNRNP48	96	54.491	ENSMICG00000012497	SNRNP48	96	54.491	Microcebus_murinus
ENSLACG00000003958	SNRNP48	99	52.187	ENSMOCG00000015555	Snrnp48	98	53.293	Microtus_ochrogaster
ENSLACG00000003958	SNRNP48	57	54.359	ENSMMOG00000003072	-	63	52.239	Mola_mola
ENSLACG00000003958	SNRNP48	86	56.333	ENSMODG00000009996	SNRNP48	92	56.647	Monodelphis_domestica
ENSLACG00000003958	SNRNP48	79	51.481	ENSMALG00000005725	snrnp48	95	48.640	Monopterus_albus
ENSLACG00000003958	SNRNP48	99	51.603	MGP_CAROLIEiJ_G0018441	Snrnp48	98	52.537	Mus_caroli
ENSLACG00000003958	SNRNP48	99	51.603	ENSMUSG00000021431	Snrnp48	98	52.537	Mus_musculus
ENSLACG00000003958	SNRNP48	99	52.035	MGP_PahariEiJ_G0019509	Snrnp48	98	53.134	Mus_pahari
ENSLACG00000003958	SNRNP48	99	51.020	MGP_SPRETEiJ_G0019321	Snrnp48	98	52.239	Mus_spretus
ENSLACG00000003958	SNRNP48	98	53.061	ENSNGAG00000004849	Snrnp48	95	54.848	Nannospalax_galili
ENSLACG00000003958	SNRNP48	73	51.200	ENSNBRG00000012127	snrnp48	93	45.994	Neolamprologus_brichardi
ENSLACG00000003958	SNRNP48	98	52.478	ENSNLEG00000011667	SNRNP48	96	53.892	Nomascus_leucogenys
ENSLACG00000003958	SNRNP48	96	50.453	ENSOPRG00000015471	SNRNP48	98	52.500	Ochotona_princeps
ENSLACG00000003958	SNRNP48	91	47.604	ENSONIG00000001520	snrnp48	93	46.398	Oreochromis_niloticus
ENSLACG00000003958	SNRNP48	54	46.535	ENSOANG00000019888	-	98	48.058	Ornithorhynchus_anatinus
ENSLACG00000003958	SNRNP48	82	55.439	ENSOCUG00000005168	SNRNP48	97	57.143	Oryctolagus_cuniculus
ENSLACG00000003958	SNRNP48	89	49.191	ENSORLG00000015654	snrnp48	92	47.813	Oryzias_latipes
ENSLACG00000003958	SNRNP48	87	47.682	ENSORLG00020015976	snrnp48	80	46.588	Oryzias_latipes_hni
ENSLACG00000003958	SNRNP48	71	53.878	ENSORLG00015022379	snrnp48	79	47.661	Oryzias_latipes_hsok
ENSLACG00000003958	SNRNP48	84	49.828	ENSOMEG00000022007	snrnp48	93	47.181	Oryzias_melastigma
ENSLACG00000003958	SNRNP48	94	51.368	ENSOGAG00000005275	SNRNP48	97	52.308	Otolemur_garnettii
ENSLACG00000003958	SNRNP48	85	54.795	ENSOARG00000017319	SNRNP48	100	54.795	Ovis_aries
ENSLACG00000003958	SNRNP48	98	52.478	ENSPPAG00000032873	SNRNP48	96	53.892	Pan_paniscus
ENSLACG00000003958	SNRNP48	95	54.268	ENSPPRG00000004283	SNRNP48	95	54.268	Panthera_pardus
ENSLACG00000003958	SNRNP48	85	55.137	ENSPTIG00000013502	SNRNP48	100	55.137	Panthera_tigris_altaica
ENSLACG00000003958	SNRNP48	98	52.478	ENSPTRG00000017703	SNRNP48	96	53.892	Pan_troglodytes
ENSLACG00000003958	SNRNP48	98	52.770	ENSPANG00000000771	SNRNP48	96	54.192	Papio_anubis
ENSLACG00000003958	SNRNP48	100	49.568	ENSPKIG00000013703	snrnp48	72	49.568	Paramormyrops_kingsleyae
ENSLACG00000003958	SNRNP48	86	57.475	ENSPSIG00000002213	SNRNP48	94	58.224	Pelodiscus_sinensis
ENSLACG00000003958	SNRNP48	81	49.638	ENSPMGG00000008120	snrnp48	96	49.638	Periophthalmus_magnuspinnatus
ENSLACG00000003958	SNRNP48	99	52.907	ENSPEMG00000008872	Snrnp48	98	54.030	Peromyscus_maniculatus_bairdii
ENSLACG00000003958	SNRNP48	80	53.114	ENSPFOG00000003578	snrnp48	91	50.746	Poecilia_formosa
ENSLACG00000003958	SNRNP48	72	53.061	ENSPLAG00000002290	snrnp48	83	53.061	Poecilia_latipinna
ENSLACG00000003958	SNRNP48	80	53.846	ENSPMEG00000018033	snrnp48	91	51.343	Poecilia_mexicana
ENSLACG00000003958	SNRNP48	74	55.952	ENSPREG00000018541	snrnp48	91	51.642	Poecilia_reticulata
ENSLACG00000003958	SNRNP48	98	52.478	ENSPPYG00000016209	SNRNP48	96	53.892	Pongo_abelii
ENSLACG00000003958	SNRNP48	72	44.758	ENSPCAG00000011991	SNRNP48	92	45.418	Procavia_capensis
ENSLACG00000003958	SNRNP48	98	51.895	ENSPVAG00000002854	SNRNP48	96	52.994	Pteropus_vampyrus
ENSLACG00000003958	SNRNP48	94	42.105	ENSPNYG00000015399	snrnp48	97	47.879	Pundamilia_nyererei
ENSLACG00000003958	SNRNP48	99	52.907	ENSRNOG00000013756	Snrnp48	98	54.030	Rattus_norvegicus
ENSLACG00000003958	SNRNP48	92	54.232	ENSRBIG00000043856	SNRNP48	95	56.352	Rhinopithecus_bieti
ENSLACG00000003958	SNRNP48	98	52.478	ENSRROG00000043229	SNRNP48	96	53.892	Rhinopithecus_roxellana
ENSLACG00000003958	SNRNP48	98	53.061	ENSSBOG00000019486	SNRNP48	96	54.491	Saimiri_boliviensis_boliviensis
ENSLACG00000003958	SNRNP48	86	55.629	ENSSHAG00000014483	SNRNP48	98	55.780	Sarcophilus_harrisii
ENSLACG00000003958	SNRNP48	74	54.688	ENSSFOG00015006610	snrnp48	78	50.147	Scleropages_formosus
ENSLACG00000003958	SNRNP48	87	50.842	ENSSDUG00000014953	snrnp48	91	50.949	Seriola_dumerili
ENSLACG00000003958	SNRNP48	87	50.336	ENSSLDG00000005989	snrnp48	91	50.473	Seriola_lalandi_dorsalis
ENSLACG00000003958	SNRNP48	80	59.636	ENSSPUG00000006257	SNRNP48	86	59.076	Sphenodon_punctatus
ENSLACG00000003958	SNRNP48	82	51.601	ENSSPAG00000006454	snrnp48	91	50.467	Stegastes_partitus
ENSLACG00000003958	SNRNP48	86	57.807	ENSTGUG00000007575	SNRNP48	93	57.807	Taeniopygia_guttata
ENSLACG00000003958	SNRNP48	74	52.344	ENSTRUG00000007031	snrnp48	97	46.588	Takifugu_rubripes
ENSLACG00000003958	SNRNP48	95	46.012	ENSTNIG00000012977	-	92	46.319	Tetraodon_nigroviridis
ENSLACG00000003958	SNRNP48	75	55.000	ENSTBEG00000015620	SNRNP48	75	55.469	Tupaia_belangeri
ENSLACG00000003958	SNRNP48	96	51.045	ENSTTRG00000016715	SNRNP48	96	52.584	Tursiops_truncatus
ENSLACG00000003958	SNRNP48	98	52.632	ENSUAMG00000003690	SNRNP48	96	53.593	Ursus_americanus
ENSLACG00000003958	SNRNP48	81	54.093	ENSVPAG00000003557	SNRNP48	100	54.608	Vicugna_pacos
ENSLACG00000003958	SNRNP48	98	52.187	ENSVVUG00000004996	SNRNP48	96	53.293	Vulpes_vulpes
ENSLACG00000003958	SNRNP48	88	53.595	ENSXETG00000020447	snrnp48	96	53.824	Xenopus_tropicalis
ENSLACG00000003958	SNRNP48	70	53.556	ENSXCOG00000004478	snrnp48	91	47.222	Xiphophorus_couchianus
ENSLACG00000003958	SNRNP48	80	52.381	ENSXMAG00000013595	snrnp48	91	49.845	Xiphophorus_maculatus