EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000003989 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 3887 bases
Position: chrJH129211.1:104267-108153
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004483	RVT_1	PF00078.27	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004522	-	2361	-	ENSLACP00000004483	787 (aa)	-	H3A4B2

Gene Model

Click here to download ENSLACG00000003989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000003989's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000003989	-	57	83.652	ENSLACG00000008451	-	100	83.652
ENSLACG00000003989	-	53	31.264	ENSLACG00000005942	-	99	31.264
ENSLACG00000003989	-	55	44.170	ENSLACG00000002807	-	98	44.170
ENSLACG00000003989	-	53	30.645	ENSLACG00000004872	-	99	30.645
ENSLACG00000003989	-	51	30.288	ENSLACG00000010332	-	96	30.288
ENSLACG00000003989	-	56	30.670	ENSLACG00000010026	-	97	30.670
ENSLACG00000003989	-	52	32.388	ENSLACG00000004681	-	98	32.388

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000003989	-	97	35.135	ENSAPEG00000024005	-	63	35.135	Amphiprion_percula
ENSLACG00000003989	-	68	33.712	ENSACAG00000029468	-	53	33.712	Anolis_carolinensis
ENSLACG00000003989	-	74	32.342	ENSACAG00000029072	-	56	32.342	Anolis_carolinensis
ENSLACG00000003989	-	98	35.811	ENSACLG00000023207	-	64	35.811	Astatotilapia_calliptera
ENSLACG00000003989	-	97	34.363	ENSACLG00000019734	-	64	34.363	Astatotilapia_calliptera
ENSLACG00000003989	-	96	37.500	ENSACLG00000010059	-	87	37.500	Astatotilapia_calliptera
ENSLACG00000003989	-	99	35.690	ENSACLG00000002299	-	65	35.690	Astatotilapia_calliptera
ENSLACG00000003989	-	98	36.486	ENSACLG00000009410	-	85	36.486	Astatotilapia_calliptera
ENSLACG00000003989	-	98	35.811	ENSACLG00000012503	-	64	35.811	Astatotilapia_calliptera
ENSLACG00000003989	-	99	35.354	ENSACLG00000007947	-	75	35.354	Astatotilapia_calliptera
ENSLACG00000003989	-	94	35.472	ENSAMXG00000042337	-	89	35.472	Astyanax_mexicanus
ENSLACG00000003989	-	97	32.558	ENSAMXG00000036080	-	70	32.558	Astyanax_mexicanus
ENSLACG00000003989	-	95	34.875	ENSDARG00000100065	CU467837.1	62	34.875	Danio_rerio
ENSLACG00000003989	-	83	35.766	ENSDARG00000112132	BX470182.1	59	35.766	Danio_rerio
ENSLACG00000003989	-	97	33.117	ENSDNOG00000032631	-	71	33.117	Dasypus_novemcinctus
ENSLACG00000003989	-	90	33.333	ENSEASG00005018086	-	73	33.333	Equus_asinus_asinus
ENSLACG00000003989	-	97	33.657	ENSEASG00005022910	-	72	33.657	Equus_asinus_asinus
ENSLACG00000003989	-	97	33.657	ENSEASG00005016911	-	63	33.657	Equus_asinus_asinus
ENSLACG00000003989	-	86	33.657	ENSEASG00005016304	-	87	33.657	Equus_asinus_asinus
ENSLACG00000003989	-	77	33.657	ENSEASG00005020069	-	71	33.657	Equus_asinus_asinus
ENSLACG00000003989	-	75	33.649	ENSECAG00000012123	-	87	33.649	Equus_caballus
ENSLACG00000003989	-	86	36.715	ENSECAG00000017913	-	85	36.715	Equus_caballus
ENSLACG00000003989	-	67	32.468	ENSFCAG00000044938	-	56	32.468	Felis_catus
ENSLACG00000003989	-	97	34.343	ENSKMAG00000002570	-	62	34.343	Kryptolebias_marmoratus
ENSLACG00000003989	-	96	35.439	ENSKMAG00000009901	-	62	35.439	Kryptolebias_marmoratus
ENSLACG00000003989	-	98	34.333	ENSKMAG00000000374	-	75	34.333	Kryptolebias_marmoratus
ENSLACG00000003989	-	98	34.667	ENSKMAG00000016041	-	71	34.667	Kryptolebias_marmoratus
ENSLACG00000003989	-	97	31.818	ENSMFAG00000027683	-	66	31.818	Macaca_fascicularis
ENSLACG00000003989	-	90	31.169	ENSMFAG00000021158	-	61	31.169	Macaca_fascicularis
ENSLACG00000003989	-	97	30.421	ENSMFAG00000016983	-	64	30.421	Macaca_fascicularis
ENSLACG00000003989	-	97	32.143	ENSMMUG00000039574	-	73	32.143	Macaca_mulatta
ENSLACG00000003989	-	97	32.468	ENSMMUG00000043159	-	75	32.468	Macaca_mulatta
ENSLACG00000003989	-	86	32.143	ENSMMUG00000047485	-	67	32.143	Macaca_mulatta
ENSLACG00000003989	-	52	33.333	ENSMMUG00000047716	-	60	32.867	Macaca_mulatta
ENSLACG00000003989	-	97	36.486	ENSORLG00000022093	-	78	36.486	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000026409	-	65	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000030319	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000025057	-	65	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000029348	-	66	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000026574	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	36.027	ENSORLG00000026117	-	63	36.027	Oryzias_latipes
ENSLACG00000003989	-	97	34.122	ENSORLG00000023842	-	66	34.122	Oryzias_latipes
ENSLACG00000003989	-	97	34.459	ENSORLG00000027333	-	71	34.459	Oryzias_latipes
ENSLACG00000003989	-	96	35.034	ENSORLG00000029560	-	65	35.034	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000028541	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000026236	-	65	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000024230	-	65	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000028057	-	65	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000029461	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000022925	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	35.354	ENSORLG00000022453	-	65	35.354	Oryzias_latipes
ENSLACG00000003989	-	97	35.354	ENSORLG00000022458	-	65	35.354	Oryzias_latipes
ENSLACG00000003989	-	98	35.135	ENSORLG00000030174	-	63	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000024212	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000025676	-	67	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000028545	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	96	34.459	ENSORLG00000023192	-	64	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000025803	-	65	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000027430	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	35.484	ENSORLG00000027601	-	65	35.484	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000025887	-	69	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000027816	-	77	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000024335	-	65	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000022242	-	65	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000022241	-	66	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000023962	-	65	35.135	Oryzias_latipes
ENSLACG00000003989	-	88	37.561	ENSORLG00000022464	-	86	37.561	Oryzias_latipes
ENSLACG00000003989	-	95	36.071	ENSORLG00000025035	-	64	36.071	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000028439	-	78	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000028129	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	35.017	ENSORLG00000027879	-	65	35.017	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000022848	-	65	35.135	Oryzias_latipes
ENSLACG00000003989	-	97	35.811	ENSORLG00000025984	-	65	35.811	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000023904	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000022264	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	34.797	ENSORLG00000025213	-	65	34.797	Oryzias_latipes
ENSLACG00000003989	-	97	35.135	ENSORLG00000022606	-	65	35.135	Oryzias_latipes
ENSLACG00000003989	-	92	34.182	ENSORLG00000029532	-	62	34.182	Oryzias_latipes
ENSLACG00000003989	-	97	35.354	ENSORLG00020005656	-	65	35.354	Oryzias_latipes_hni
ENSLACG00000003989	-	97	35.354	ENSORLG00020018889	-	65	35.354	Oryzias_latipes_hni
ENSLACG00000003989	-	97	35.811	ENSORLG00020011033	-	65	35.811	Oryzias_latipes_hni
ENSLACG00000003989	-	98	34.857	ENSORLG00020019330	-	63	34.875	Oryzias_latipes_hni
ENSLACG00000003989	-	97	35.354	ENSORLG00020004575	-	65	35.354	Oryzias_latipes_hni
ENSLACG00000003989	-	97	35.354	ENSORLG00020002923	-	65	35.354	Oryzias_latipes_hni
ENSLACG00000003989	-	76	31.419	ENSORLG00015010651	-	57	31.419	Oryzias_latipes_hsok
ENSLACG00000003989	-	88	38.049	ENSORLG00015002019	-	80	38.049	Oryzias_latipes_hsok
ENSLACG00000003989	-	98	35.254	ENSORLG00015003402	-	70	35.254	Oryzias_latipes_hsok
ENSLACG00000003989	-	95	31.469	ENSORLG00015011318	-	67	31.469	Oryzias_latipes_hsok
ENSLACG00000003989	-	97	31.208	ENSOMEG00000007552	-	63	31.208	Oryzias_melastigma
ENSLACG00000003989	-	97	32.468	ENSPTRG00000048756	-	63	32.468	Pan_troglodytes
ENSLACG00000003989	-	97	31.818	ENSPTRG00000046661	-	63	31.818	Pan_troglodytes
ENSLACG00000003989	-	97	32.143	ENSPTRG00000051987	-	64	32.143	Pan_troglodytes
ENSLACG00000003989	-	97	32.468	ENSPTRG00000048435	-	63	32.468	Pan_troglodytes
ENSLACG00000003989	-	97	31.818	ENSPANG00000035291	-	63	31.818	Papio_anubis
ENSLACG00000003989	-	97	31.169	ENSPANG00000035704	-	63	31.169	Papio_anubis
ENSLACG00000003989	-	97	31.494	ENSPANG00000029594	-	63	31.494	Papio_anubis
ENSLACG00000003989	-	96	32.384	ENSPMEG00000017430	-	76	32.384	Poecilia_mexicana
ENSLACG00000003989	-	94	31.558	ENSPMEG00000000819	-	76	31.558	Poecilia_mexicana