EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004000 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1086 bases
Position: chrJH130628.1:104605-105690
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004494	zf-CCHC	PF00098.23	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004533	-	933	-	ENSLACP00000004494	311 (aa)	-	H3A4C3

Gene Model

Click here to download ENSLACG00000004000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004000	-	85	52.881	ENSLACG00000012908	-	96	52.881
ENSLACG00000004000	-	100	55.556	ENSLACG00000002057	-	96	55.856
ENSLACG00000004000	-	100	47.678	ENSLACG00000002836	-	97	47.678
ENSLACG00000004000	-	99	54.848	ENSLACG00000004689	-	90	54.848
ENSLACG00000004000	-	89	57.823	ENSLACG00000005078	-	96	57.143
ENSLACG00000004000	-	99	77.492	ENSLACG00000002363	-	79	77.492
ENSLACG00000004000	-	100	67.296	ENSLACG00000017942	-	98	67.296
ENSLACG00000004000	-	100	64.465	ENSLACG00000000325	-	96	65.094
ENSLACG00000004000	-	98	59.683	ENSLACG00000006128	-	96	59.683
ENSLACG00000004000	-	69	65.471	ENSLACG00000012373	-	76	66.368
ENSLACG00000004000	-	99	66.032	ENSLACG00000002768	-	83	66.032
ENSLACG00000004000	-	85	53.405	ENSLACG00000010543	-	96	53.405
ENSLACG00000004000	-	99	54.938	ENSLACG00000004531	-	98	54.938
ENSLACG00000004000	-	99	76.997	ENSLACG00000008039	-	96	76.997

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004000	-	69	42.460	ENSCPBG00000028243	-	81	42.460	Chrysemys_picta_bellii
ENSLACG00000004000	-	59	47.264	ENSGAGG00000002892	-	94	47.264	Gopherus_agassizii
ENSLACG00000004000	-	99	47.484	ENSXETG00000006819	-	73	47.484	Xenopus_tropicalis
ENSLACG00000004000	-	99	47.335	ENSXETG00000026538	-	79	47.335	Xenopus_tropicalis
ENSLACG00000004000	-	99	47.170	ENSXETG00000005082	ankrd31	79	47.170	Xenopus_tropicalis
ENSLACG00000004000	-	99	46.440	ENSXETG00000019379	-	80	46.440	Xenopus_tropicalis