EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004025 (Gene tree)
Gene ID: 102362093
Gene Symbol: RAB23
Alias: -
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 41115 bases
Position: chrJH128391.1:105707-146821
Accession: 102362093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004523	MMR_HSR1	PF01926.23	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004562	RAB23-201	917	XM_006008627	ENSLACP00000004523	237 (aa)	XP_006008689	H3A4F2

Gene Model

Click here to download ENSLACG00000004025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004025	RAB23	70	35.503	ENSLACG00000002332	-	74	35.669
ENSLACG00000004025	RAB23	73	33.908	ENSLACG00000013122	RRAS2	94	35.185
ENSLACG00000004025	RAB23	68	35.185	ENSLACG00000011380	rab11al	65	35.664
ENSLACG00000004025	RAB23	79	34.211	ENSLACG00000011157	RAB25	89	34.211
ENSLACG00000004025	RAB23	57	30.657	ENSLACG00000010885	-	96	30.405
ENSLACG00000004025	RAB23	65	37.013	ENSLACG00000014446	RAB2B	86	37.324
ENSLACG00000004025	RAB23	70	34.884	ENSLACG00000008809	zgc:100918	76	34.395
ENSLACG00000004025	RAB23	83	34.500	ENSLACG00000006407	RAB30	99	34.500
ENSLACG00000004025	RAB23	77	32.979	ENSLACG00000011181	RAB14	82	32.955
ENSLACG00000004025	RAB23	64	37.662	ENSLACG00000012088	rheb	77	37.762
ENSLACG00000004025	RAB23	84	32.500	ENSLACG00000012869	RAB1A	88	33.889
ENSLACG00000004025	RAB23	77	38.710	ENSLACG00000017799	RAB36	64	36.571
ENSLACG00000004025	RAB23	66	39.241	ENSLACG00000005168	RAB6A	70	39.041
ENSLACG00000004025	RAB23	68	32.727	ENSLACG00000017464	KRAS	86	32.727
ENSLACG00000004025	RAB23	76	35.912	ENSLACG00000016857	-	74	36.420
ENSLACG00000004025	RAB23	65	30.380	ENSLACG00000003581	rasd3	70	30.612
ENSLACG00000004025	RAB23	67	36.250	ENSLACG00000004663	RAB5A	69	35.135
ENSLACG00000004025	RAB23	64	39.873	ENSLACG00000002523	RAB29	70	39.041
ENSLACG00000004025	RAB23	61	31.507	ENSLACG00000018427	HRAS	77	31.293
ENSLACG00000004025	RAB23	67	30.247	ENSLACG00000018428	NRAS	85	30.247
ENSLACG00000004025	RAB23	69	38.095	ENSLACG00000010461	RAB12	62	38.462
ENSLACG00000004025	RAB23	72	35.465	ENSLACG00000009310	rab18a	83	35.465
ENSLACG00000004025	RAB23	67	33.939	ENSLACG00000013571	RAB33B	67	33.333
ENSLACG00000004025	RAB23	66	37.975	ENSLACG00000013980	rab41	69	37.671
ENSLACG00000004025	RAB23	59	31.469	ENSLACG00000014985	RAP2B	78	31.250
ENSLACG00000004025	RAB23	70	34.524	ENSLACG00000012755	-	74	35.256
ENSLACG00000004025	RAB23	66	39.375	ENSLACG00000001081	RAB34	58	37.584
ENSLACG00000004025	RAB23	66	36.478	ENSLACG00000016074	RAB39B	69	36.735
ENSLACG00000004025	RAB23	65	39.130	ENSLACG00000017891	RAB9B	69	38.776
ENSLACG00000004025	RAB23	67	33.728	ENSLACG00000011557	zgc:101559	66	32.484
ENSLACG00000004025	RAB23	68	37.267	ENSLACG00000016974	RAB11B	83	36.620
ENSLACG00000004025	RAB23	66	36.875	ENSLACG00000012674	si:dkey-34d22.5	70	37.838
ENSLACG00000004025	RAB23	70	33.533	ENSLACG00000012521	RAB2A	73	33.548
ENSLACG00000004025	RAB23	77	33.152	ENSLACG00000022111	-	76	33.553
ENSLACG00000004025	RAB23	70	35.673	ENSLACG00000008103	-	88	35.849
ENSLACG00000004025	RAB23	77	34.021	ENSLACG00000012184	RAB11A	84	33.143
ENSLACG00000004025	RAB23	61	32.192	ENSLACG00000017138	RRAS	83	32.192
ENSLACG00000004025	RAB23	73	35.196	ENSLACG00000015770	RAB7A	78	34.756
ENSLACG00000004025	RAB23	73	33.526	ENSLACG00000012717	RAB1B	76	34.641
ENSLACG00000004025	RAB23	72	35.465	ENSLACG00000011256	rab18b	83	35.465
ENSLACG00000004025	RAB23	65	31.818	ENSLACG00000007092	RAB22A	73	30.986
ENSLACG00000004025	RAB23	52	35.484	ENSLACG00000018793	RAN	74	33.945

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004025	RAB23	99	88.559	ENSG00000112210	RAB23	99	88.559	Homo_sapiens
ENSLACG00000004025	RAB23	100	85.232	ENSAPOG00000008892	rab23	100	85.232	Acanthochromis_polyacanthus
ENSLACG00000004025	RAB23	99	88.559	ENSAMEG00000006825	RAB23	99	88.559	Ailuropoda_melanoleuca
ENSLACG00000004025	RAB23	100	75.105	ENSACIG00000020496	rab23	100	75.105	Amphilophus_citrinellus
ENSLACG00000004025	RAB23	100	85.654	ENSAOCG00000004234	rab23	100	85.654	Amphiprion_ocellaris
ENSLACG00000004025	RAB23	100	85.654	ENSAPEG00000019758	rab23	100	85.654	Amphiprion_percula
ENSLACG00000004025	RAB23	100	85.654	ENSATEG00000020913	rab23	100	85.654	Anabas_testudineus
ENSLACG00000004025	RAB23	75	94.350	ENSAPLG00000003715	RAB23	100	94.350	Anas_platyrhynchos
ENSLACG00000004025	RAB23	99	87.764	ENSACAG00000006656	RAB23	99	87.764	Anolis_carolinensis
ENSLACG00000004025	RAB23	99	88.136	ENSANAG00000027052	-	99	88.136	Aotus_nancymaae
ENSLACG00000004025	RAB23	100	86.076	ENSACLG00000002819	rab23	100	86.076	Astatotilapia_calliptera
ENSLACG00000004025	RAB23	100	84.810	ENSAMXG00000014960	rab23	100	84.810	Astyanax_mexicanus
ENSLACG00000004025	RAB23	99	86.864	ENSBTAG00000005362	RAB23	99	86.864	Bos_taurus
ENSLACG00000004025	RAB23	99	88.136	ENSCJAG00000010247	RAB23	99	88.136	Callithrix_jacchus
ENSLACG00000004025	RAB23	99	88.559	ENSCAFG00000002459	RAB23	99	88.559	Canis_familiaris
ENSLACG00000004025	RAB23	99	88.559	ENSCAFG00020015900	RAB23	99	88.559	Canis_lupus_dingo
ENSLACG00000004025	RAB23	99	86.864	ENSCHIG00000009815	RAB23	99	86.864	Capra_hircus
ENSLACG00000004025	RAB23	100	88.608	ENSTSYG00000029126	RAB23	100	88.608	Carlito_syrichta
ENSLACG00000004025	RAB23	99	83.898	ENSCPOG00000030218	RAB23	99	83.898	Cavia_porcellus
ENSLACG00000004025	RAB23	99	87.712	ENSCCAG00000020364	RAB23	99	87.712	Cebus_capucinus
ENSLACG00000004025	RAB23	99	88.983	ENSCATG00000027876	RAB23	99	88.983	Cercocebus_atys
ENSLACG00000004025	RAB23	99	86.017	ENSCLAG00000000797	RAB23	99	86.017	Chinchilla_lanigera
ENSLACG00000004025	RAB23	99	88.983	ENSCSAG00000013438	RAB23	99	88.983	Chlorocebus_sabaeus
ENSLACG00000004025	RAB23	99	90.678	ENSCPBG00000022640	RAB23	99	90.678	Chrysemys_picta_bellii
ENSLACG00000004025	RAB23	100	65.021	ENSCING00000001155	-	100	65.021	Ciona_intestinalis
ENSLACG00000004025	RAB23	100	63.071	ENSCSAVG00000001356	-	100	64.463	Ciona_savignyi
ENSLACG00000004025	RAB23	99	88.559	ENSCANG00000031065	RAB23	99	88.559	Colobus_angolensis_palliatus
ENSLACG00000004025	RAB23	99	87.288	ENSCGRG00001008994	Rab23	99	87.288	Cricetulus_griseus_chok1gshd
ENSLACG00000004025	RAB23	99	86.383	ENSCGRG00000013630	Rab23	99	86.383	Cricetulus_griseus_crigri
ENSLACG00000004025	RAB23	100	73.840	ENSCSEG00000010565	rab23	100	73.840	Cynoglossus_semilaevis
ENSLACG00000004025	RAB23	100	84.810	ENSCVAG00000020501	rab23	100	84.810	Cyprinodon_variegatus
ENSLACG00000004025	RAB23	100	84.388	ENSDARG00000004151	rab23	100	84.388	Danio_rerio
ENSLACG00000004025	RAB23	99	85.593	ENSDNOG00000015501	RAB23	99	85.593	Dasypus_novemcinctus
ENSLACG00000004025	RAB23	100	86.498	ENSDORG00000028344	Rab23	100	86.498	Dipodomys_ordii
ENSLACG00000004025	RAB23	100	57.200	FBgn0037364	Rab23	90	57.200	Drosophila_melanogaster
ENSLACG00000004025	RAB23	96	65.086	ENSEBUG00000010861	-	91	65.086	Eptatretus_burgeri
ENSLACG00000004025	RAB23	99	88.136	ENSEASG00005003529	RAB23	99	88.136	Equus_asinus_asinus
ENSLACG00000004025	RAB23	99	88.559	ENSECAG00000013427	RAB23	99	88.559	Equus_caballus
ENSLACG00000004025	RAB23	100	86.076	ENSEEUG00000015045	RAB23	100	86.076	Erinaceus_europaeus
ENSLACG00000004025	RAB23	100	83.122	ENSELUG00000020788	rab23	100	84.388	Esox_lucius
ENSLACG00000004025	RAB23	99	89.407	ENSFCAG00000044358	RAB23	99	89.407	Felis_catus
ENSLACG00000004025	RAB23	99	90.254	ENSFALG00000001708	RAB23	99	90.254	Ficedula_albicollis
ENSLACG00000004025	RAB23	99	86.017	ENSFDAG00000014834	RAB23	99	86.017	Fukomys_damarensis
ENSLACG00000004025	RAB23	100	84.388	ENSFHEG00000023069	rab23	100	84.810	Fundulus_heteroclitus
ENSLACG00000004025	RAB23	100	83.966	ENSGMOG00000005102	rab23	100	83.966	Gadus_morhua
ENSLACG00000004025	RAB23	99	89.831	ENSGALG00000016279	RAB23	99	89.831	Gallus_gallus
ENSLACG00000004025	RAB23	100	83.122	ENSGAFG00000007684	rab23	100	83.122	Gambusia_affinis
ENSLACG00000004025	RAB23	100	83.122	ENSGACG00000006151	rab23	100	83.122	Gasterosteus_aculeatus
ENSLACG00000004025	RAB23	99	91.102	ENSGAGG00000012709	RAB23	99	91.102	Gopherus_agassizii
ENSLACG00000004025	RAB23	100	75.105	ENSHBUG00000007966	rab23	100	75.105	Haplochromis_burtoni
ENSLACG00000004025	RAB23	99	72.917	ENSHGLG00000009371	-	99	72.083	Heterocephalus_glaber_female
ENSLACG00000004025	RAB23	99	86.864	ENSHGLG00000013030	-	99	86.864	Heterocephalus_glaber_female
ENSLACG00000004025	RAB23	99	72.917	ENSHGLG00100017177	-	99	72.083	Heterocephalus_glaber_male
ENSLACG00000004025	RAB23	99	86.864	ENSHGLG00100005945	-	99	86.864	Heterocephalus_glaber_male
ENSLACG00000004025	RAB23	100	72.996	ENSHCOG00000013919	rab23	100	73.418	Hippocampus_comes
ENSLACG00000004025	RAB23	100	74.262	ENSIPUG00000016494	rab23	100	74.262	Ictalurus_punctatus
ENSLACG00000004025	RAB23	99	88.983	ENSSTOG00000010962	RAB23	99	88.983	Ictidomys_tridecemlineatus
ENSLACG00000004025	RAB23	99	87.712	ENSJJAG00000020094	Rab23	99	87.712	Jaculus_jaculus
ENSLACG00000004025	RAB23	100	85.654	ENSKMAG00000018270	rab23	100	85.654	Kryptolebias_marmoratus
ENSLACG00000004025	RAB23	100	83.966	ENSLBEG00000013176	rab23	100	83.966	Labrus_bergylta
ENSLACG00000004025	RAB23	100	88.750	ENSLOCG00000016999	rab23	100	88.750	Lepisosteus_oculatus
ENSLACG00000004025	RAB23	99	89.407	ENSLAFG00000007209	RAB23	99	89.407	Loxodonta_africana
ENSLACG00000004025	RAB23	99	88.983	ENSMFAG00000032369	RAB23	99	88.983	Macaca_fascicularis
ENSLACG00000004025	RAB23	99	88.983	ENSMMUG00000018003	RAB23	99	88.983	Macaca_mulatta
ENSLACG00000004025	RAB23	99	88.983	ENSMNEG00000037012	RAB23	99	88.983	Macaca_nemestrina
ENSLACG00000004025	RAB23	99	88.983	ENSMLEG00000042429	RAB23	99	88.983	Mandrillus_leucophaeus
ENSLACG00000004025	RAB23	100	85.654	ENSMAMG00000015456	rab23	100	85.654	Mastacembelus_armatus
ENSLACG00000004025	RAB23	100	86.076	ENSMZEG00005005441	rab23	100	86.076	Maylandia_zebra
ENSLACG00000004025	RAB23	99	89.831	ENSMGAG00000013882	RAB23	99	89.831	Meleagris_gallopavo
ENSLACG00000004025	RAB23	99	89.407	ENSMICG00000014037	RAB23	99	89.407	Microcebus_murinus
ENSLACG00000004025	RAB23	99	87.288	ENSMOCG00000000444	Rab23	99	87.288	Microtus_ochrogaster
ENSLACG00000004025	RAB23	100	75.105	ENSMMOG00000007703	rab23	100	75.105	Mola_mola
ENSLACG00000004025	RAB23	99	91.102	ENSMODG00000018720	RAB23	99	91.102	Monodelphis_domestica
ENSLACG00000004025	RAB23	100	84.810	ENSMALG00000002136	rab23	100	84.810	Monopterus_albus
ENSLACG00000004025	RAB23	99	86.017	MGP_CAROLIEiJ_G0014015	Rab23	99	86.017	Mus_caroli
ENSLACG00000004025	RAB23	99	84.746	ENSMUSG00000004768	Rab23	99	84.746	Mus_musculus
ENSLACG00000004025	RAB23	99	85.169	MGP_PahariEiJ_G0027261	Rab23	99	85.169	Mus_pahari
ENSLACG00000004025	RAB23	99	85.169	MGP_SPRETEiJ_G0014820	Rab23	99	85.169	Mus_spretus
ENSLACG00000004025	RAB23	99	81.013	ENSMPUG00000002642	RAB23	99	81.013	Mustela_putorius_furo
ENSLACG00000004025	RAB23	99	88.136	ENSMLUG00000004058	RAB23	99	88.136	Myotis_lucifugus
ENSLACG00000004025	RAB23	99	88.136	ENSNGAG00000018038	Rab23	99	88.136	Nannospalax_galili
ENSLACG00000004025	RAB23	100	86.076	ENSNBRG00000013691	rab23	100	86.076	Neolamprologus_brichardi
ENSLACG00000004025	RAB23	99	88.983	ENSNLEG00000027830	RAB23	99	88.983	Nomascus_leucogenys
ENSLACG00000004025	RAB23	99	85.169	ENSODEG00000016056	RAB23	99	85.169	Octodon_degus
ENSLACG00000004025	RAB23	100	85.294	ENSONIG00000009749	rab23	100	85.294	Oreochromis_niloticus
ENSLACG00000004025	RAB23	99	91.525	ENSOANG00000001398	RAB23	99	91.525	Ornithorhynchus_anatinus
ENSLACG00000004025	RAB23	99	88.559	ENSOCUG00000004816	RAB23	99	88.559	Oryctolagus_cuniculus
ENSLACG00000004025	RAB23	100	85.232	ENSORLG00000010115	rab23	100	85.232	Oryzias_latipes
ENSLACG00000004025	RAB23	100	85.232	ENSORLG00020020220	rab23	100	85.232	Oryzias_latipes_hni
ENSLACG00000004025	RAB23	100	85.232	ENSORLG00015004033	rab23	100	85.232	Oryzias_latipes_hsok
ENSLACG00000004025	RAB23	100	84.810	ENSOMEG00000001706	rab23	100	84.810	Oryzias_melastigma
ENSLACG00000004025	RAB23	99	87.712	ENSOGAG00000005675	RAB23	99	87.712	Otolemur_garnettii
ENSLACG00000004025	RAB23	99	86.864	ENSOARG00000005749	RAB23	99	86.864	Ovis_aries
ENSLACG00000004025	RAB23	99	88.559	ENSPPAG00000010023	RAB23	99	88.559	Pan_paniscus
ENSLACG00000004025	RAB23	99	88.983	ENSPPRG00000012453	RAB23	99	88.983	Panthera_pardus
ENSLACG00000004025	RAB23	99	89.407	ENSPTIG00000009435	RAB23	99	89.407	Panthera_tigris_altaica
ENSLACG00000004025	RAB23	99	88.983	ENSPTRG00000043341	RAB23	99	88.983	Pan_troglodytes
ENSLACG00000004025	RAB23	99	88.983	ENSPANG00000017772	RAB23	99	88.983	Papio_anubis
ENSLACG00000004025	RAB23	84	85.000	ENSPKIG00000024310	rab23	98	85.000	Paramormyrops_kingsleyae
ENSLACG00000004025	RAB23	99	90.678	ENSPSIG00000015579	RAB23	99	90.678	Pelodiscus_sinensis
ENSLACG00000004025	RAB23	100	72.152	ENSPMGG00000008577	rab23	100	72.152	Periophthalmus_magnuspinnatus
ENSLACG00000004025	RAB23	99	86.864	ENSPEMG00000023271	Rab23	99	86.864	Peromyscus_maniculatus_bairdii
ENSLACG00000004025	RAB23	100	67.511	ENSPMAG00000006835	-	100	67.511	Petromyzon_marinus
ENSLACG00000004025	RAB23	99	90.254	ENSPCIG00000007267	RAB23	99	90.254	Phascolarctos_cinereus
ENSLACG00000004025	RAB23	100	83.544	ENSPFOG00000011493	rab23	100	83.544	Poecilia_formosa
ENSLACG00000004025	RAB23	100	83.122	ENSPLAG00000011697	rab23	100	83.122	Poecilia_latipinna
ENSLACG00000004025	RAB23	100	83.544	ENSPMEG00000017300	rab23	100	83.544	Poecilia_mexicana
ENSLACG00000004025	RAB23	100	73.418	ENSPREG00000022509	rab23	100	73.418	Poecilia_reticulata
ENSLACG00000004025	RAB23	99	88.983	ENSPPYG00000016739	RAB23	99	88.983	Pongo_abelii
ENSLACG00000004025	RAB23	99	88.983	ENSPCOG00000028471	RAB23	99	88.983	Propithecus_coquereli
ENSLACG00000004025	RAB23	99	80.932	ENSPVAG00000017693	RAB23	99	80.932	Pteropus_vampyrus
ENSLACG00000004025	RAB23	100	86.076	ENSPNYG00000019639	rab23	100	86.076	Pundamilia_nyererei
ENSLACG00000004025	RAB23	100	85.654	ENSPNAG00000024728	rab23	100	85.654	Pygocentrus_nattereri
ENSLACG00000004025	RAB23	99	86.017	ENSRNOG00000012629	Rab23	99	86.017	Rattus_norvegicus
ENSLACG00000004025	RAB23	99	84.647	ENSRBIG00000030547	RAB23	99	84.647	Rhinopithecus_bieti
ENSLACG00000004025	RAB23	99	88.983	ENSRROG00000035920	RAB23	99	88.983	Rhinopithecus_roxellana
ENSLACG00000004025	RAB23	99	87.288	ENSSBOG00000033237	RAB23	99	87.288	Saimiri_boliviensis_boliviensis
ENSLACG00000004025	RAB23	99	89.407	ENSSHAG00000006379	RAB23	99	89.407	Sarcophilus_harrisii
ENSLACG00000004025	RAB23	100	86.498	ENSSFOG00015012604	rab23	100	86.498	Scleropages_formosus
ENSLACG00000004025	RAB23	100	84.388	ENSSMAG00000006341	rab23	100	84.388	Scophthalmus_maximus
ENSLACG00000004025	RAB23	100	85.232	ENSSDUG00000023508	rab23	100	85.232	Seriola_dumerili
ENSLACG00000004025	RAB23	100	85.232	ENSSLDG00000000287	rab23	100	85.232	Seriola_lalandi_dorsalis
ENSLACG00000004025	RAB23	99	87.288	ENSSARG00000013689	RAB23	99	87.288	Sorex_araneus
ENSLACG00000004025	RAB23	99	91.525	ENSSPUG00000006274	RAB23	99	91.525	Sphenodon_punctatus
ENSLACG00000004025	RAB23	100	85.654	ENSSPAG00000010373	rab23	100	85.654	Stegastes_partitus
ENSLACG00000004025	RAB23	99	85.593	ENSSSCG00000029539	RAB23	99	85.593	Sus_scrofa
ENSLACG00000004025	RAB23	99	90.254	ENSTGUG00000012794	RAB23	99	90.254	Taeniopygia_guttata
ENSLACG00000004025	RAB23	100	83.966	ENSTRUG00000015697	rab23	100	83.966	Takifugu_rubripes
ENSLACG00000004025	RAB23	100	84.810	ENSTNIG00000016575	rab23	100	84.810	Tetraodon_nigroviridis
ENSLACG00000004025	RAB23	99	88.983	ENSUAMG00000013367	RAB23	99	88.983	Ursus_americanus
ENSLACG00000004025	RAB23	99	88.983	ENSUMAG00000018629	RAB23	99	88.983	Ursus_maritimus
ENSLACG00000004025	RAB23	81	63.874	ENSVPAG00000006805	RAB23	100	63.874	Vicugna_pacos
ENSLACG00000004025	RAB23	99	88.136	ENSVVUG00000008535	RAB23	99	88.136	Vulpes_vulpes
ENSLACG00000004025	RAB23	100	83.613	ENSXETG00000004449	rab23	100	83.613	Xenopus_tropicalis
ENSLACG00000004025	RAB23	100	82.700	ENSXCOG00000011864	rab23	100	82.700	Xiphophorus_couchianus
ENSLACG00000004025	RAB23	100	83.122	ENSXMAG00000009387	rab23	100	83.122	Xiphophorus_maculatus