EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004052 (Gene tree)
Gene ID: 102347027
Gene Symbol: SRSF7
Alias: 9G8|AAG3|HSSG1|RBM37|SFRS7|ZCCHC20|ZCRB2
Full Name: serine and arginine rich splicing factor 7
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 22279 bases
Position: chrJH128173.1:106843-129121
Accession: 102347027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004552	RRM_1	PF00076.22	1e-16	1	1
ENSLACP00000004551	RRM_1	PF00076.22	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004590	SRSF7-201	1654	XM_006007773	ENSLACP00000004551	242 (aa)	XP_006007835	H3A4I0
ENSLACT00000004591	SRSF7-202	723	-	ENSLACP00000004552	240 (aa)	-	H3A4I1

Gene Model

Click here to download ENSLACG00000004052's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03040	Spliceosome	KEGG
lcm05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004052	SRSF7	59	30.380	ENSLACG00000006343	zgc:77262	51	34.247

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004052	SRSF7	68	87.273	ENSG00000115875	SRSF7	97	99.219	Homo_sapiens
ENSLACG00000004052	SRSF7	50	91.597	ENSACIG00000009890	srsf7b	92	91.597	Amphilophus_citrinellus
ENSLACG00000004052	SRSF7	50	98.319	ENSACAG00000006082	SRSF7	99	83.193	Anolis_carolinensis
ENSLACG00000004052	SRSF7	99	70.954	ENSANAG00000019399	SRSF7	87	99.160	Aotus_nancymaae
ENSLACG00000004052	SRSF7	50	92.437	ENSAMXG00000007005	srsf7b	56	92.437	Astyanax_mexicanus
ENSLACG00000004052	SRSF7	50	99.160	ENSBTAG00000014891	SRSF7	87	99.160	Bos_taurus
ENSLACG00000004052	SRSF7	68	87.273	ENSCJAG00000015185	SRSF7	87	99.160	Callithrix_jacchus
ENSLACG00000004052	SRSF7	50	99.160	ENSCAFG00000029620	SRSF7	99	82.008	Canis_familiaris
ENSLACG00000004052	SRSF7	50	99.160	ENSCAFG00020022807	SRSF7	87	99.160	Canis_lupus_dingo
ENSLACG00000004052	SRSF7	54	66.412	ENSCAFG00020013547	-	75	68.333	Canis_lupus_dingo
ENSLACG00000004052	SRSF7	50	99.160	ENSCHIG00000019180	SRSF7	87	99.160	Capra_hircus
ENSLACG00000004052	SRSF7	78	82.292	ENSTSYG00000012273	SRSF7	87	99.160	Carlito_syrichta
ENSLACG00000004052	SRSF7	50	99.160	ENSCPOG00000033318	SRSF7	87	99.160	Cavia_porcellus
ENSLACG00000004052	SRSF7	68	87.273	ENSCATG00000031728	SRSF7	87	99.160	Cercocebus_atys
ENSLACG00000004052	SRSF7	50	99.160	ENSCLAG00000005235	SRSF7	87	99.160	Chinchilla_lanigera
ENSLACG00000004052	SRSF7	50	99.160	ENSCSAG00000012296	SRSF7	50	99.160	Chlorocebus_sabaeus
ENSLACG00000004052	SRSF7	50	90.756	ENSCHOG00000002390	-	99	77.824	Choloepus_hoffmanni
ENSLACG00000004052	SRSF7	50	95.798	ENSCPBG00000018252	-	87	95.798	Chrysemys_picta_bellii
ENSLACG00000004052	SRSF7	50	98.319	ENSCPBG00000018247	-	87	98.319	Chrysemys_picta_bellii
ENSLACG00000004052	SRSF7	86	46.606	ENSCING00000023459	-	54	56.452	Ciona_intestinalis
ENSLACG00000004052	SRSF7	84	48.611	ENSCSAVG00000010868	-	55	58.197	Ciona_savignyi
ENSLACG00000004052	SRSF7	68	87.273	ENSCANG00000040757	SRSF7	87	99.160	Colobus_angolensis_palliatus
ENSLACG00000004052	SRSF7	50	99.160	ENSCGRG00001018245	Srsf7	99	82.008	Cricetulus_griseus_chok1gshd
ENSLACG00000004052	SRSF7	52	74.400	ENSCSEG00000006378	srsf7a	78	77.477	Cynoglossus_semilaevis
ENSLACG00000004052	SRSF7	72	41.954	ENSDARG00000100815	srsf3a	70	70.526	Danio_rerio
ENSLACG00000004052	SRSF7	72	41.954	ENSDARG00000025397	srsf3a	70	70.526	Danio_rerio
ENSLACG00000004052	SRSF7	50	91.597	ENSDARG00000101057	srsf7b	78	91.597	Danio_rerio
ENSLACG00000004052	SRSF7	79	68.750	ENSDARG00000035325	srsf7a	97	74.725	Danio_rerio
ENSLACG00000004052	SRSF7	50	99.160	ENSDNOG00000007821	SRSF7	87	99.160	Dasypus_novemcinctus
ENSLACG00000004052	SRSF7	50	99.160	ENSDORG00000008616	Srsf7	99	82.008	Dipodomys_ordii
ENSLACG00000004052	SRSF7	65	50.000	ENSEBUG00000002677	-	56	65.517	Eptatretus_burgeri
ENSLACG00000004052	SRSF7	50	99.160	ENSEASG00005005547	SRSF7	87	99.160	Equus_asinus_asinus
ENSLACG00000004052	SRSF7	50	99.160	ENSECAG00000008664	SRSF7	99	82.008	Equus_caballus
ENSLACG00000004052	SRSF7	99	66.802	ENSEEUG00000014487	SRSF7	99	66.802	Erinaceus_europaeus
ENSLACG00000004052	SRSF7	87	79.245	ENSELUG00000018155	srsf7b	86	86.555	Esox_lucius
ENSLACG00000004052	SRSF7	53	74.046	ENSELUG00000016922	srsf7a	82	75.630	Esox_lucius
ENSLACG00000004052	SRSF7	77	50.000	ENSELUG00000014357	SRSF3	52	69.767	Esox_lucius
ENSLACG00000004052	SRSF7	50	99.160	ENSFCAG00000031143	SRSF7	55	99.160	Felis_catus
ENSLACG00000004052	SRSF7	57	62.143	ENSFCAG00000028644	-	79	61.017	Felis_catus
ENSLACG00000004052	SRSF7	50	99.160	ENSFDAG00000016030	-	87	99.160	Fukomys_damarensis
ENSLACG00000004052	SRSF7	50	77.686	ENSFHEG00000007159	srsf7a	59	78.378	Fundulus_heteroclitus
ENSLACG00000004052	SRSF7	50	90.083	ENSFHEG00000023046	srsf7b	52	89.916	Fundulus_heteroclitus
ENSLACG00000004052	SRSF7	50	94.118	ENSGALG00000033120	SRSF7	87	94.118	Gallus_gallus
ENSLACG00000004052	SRSF7	50	95.798	ENSGAGG00000003553	SRSF7	87	95.798	Gopherus_agassizii
ENSLACG00000004052	SRSF7	50	92.437	ENSGAGG00000016294	-	87	92.437	Gopherus_agassizii
ENSLACG00000004052	SRSF7	68	87.273	ENSGGOG00000014620	SRSF7	87	99.160	Gorilla_gorilla
ENSLACG00000004052	SRSF7	69	48.795	ENSHBUG00000022402	-	51	74.419	Haplochromis_burtoni
ENSLACG00000004052	SRSF7	50	75.000	ENSHGLG00000005295	-	87	75.000	Heterocephalus_glaber_female
ENSLACG00000004052	SRSF7	50	99.160	ENSHGLG00000013954	-	99	82.008	Heterocephalus_glaber_female
ENSLACG00000004052	SRSF7	50	99.160	ENSHGLG00100006124	-	87	99.160	Heterocephalus_glaber_male
ENSLACG00000004052	SRSF7	50	75.000	ENSHGLG00100014570	-	87	75.000	Heterocephalus_glaber_male
ENSLACG00000004052	SRSF7	50	94.118	ENSIPUG00000011708	srsf7	68	94.118	Ictalurus_punctatus
ENSLACG00000004052	SRSF7	50	99.160	ENSSTOG00000004389	SRSF7	87	99.160	Ictidomys_tridecemlineatus
ENSLACG00000004052	SRSF7	62	64.667	ENSJJAG00000020230	-	73	70.492	Jaculus_jaculus
ENSLACG00000004052	SRSF7	50	99.160	ENSJJAG00000023079	Srsf7	99	82.008	Jaculus_jaculus
ENSLACG00000004052	SRSF7	53	99.219	ENSLAFG00000005666	SRSF7	80	99.219	Loxodonta_africana
ENSLACG00000004052	SRSF7	68	87.273	ENSMFAG00000001980	SRSF7	87	99.160	Macaca_fascicularis
ENSLACG00000004052	SRSF7	65	85.987	ENSMMUG00000011025	SRSF7	71	97.222	Macaca_mulatta
ENSLACG00000004052	SRSF7	68	87.273	ENSMNEG00000036669	SRSF7	99	82.427	Macaca_nemestrina
ENSLACG00000004052	SRSF7	68	87.273	ENSMLEG00000038852	SRSF7	87	99.160	Mandrillus_leucophaeus
ENSLACG00000004052	SRSF7	71	77.907	ENSMAMG00000017138	srsf7b	52	93.277	Mastacembelus_armatus
ENSLACG00000004052	SRSF7	67	47.561	ENSMAUG00000011430	-	62	55.789	Mesocricetus_auratus
ENSLACG00000004052	SRSF7	50	99.160	ENSMAUG00000017430	Srsf7	99	82.008	Mesocricetus_auratus
ENSLACG00000004052	SRSF7	50	99.160	ENSMICG00000005046	SRSF7	100	82.008	Microcebus_murinus
ENSLACG00000004052	SRSF7	50	67.227	ENSMOCG00000012617	-	99	66.109	Microtus_ochrogaster
ENSLACG00000004052	SRSF7	53	92.063	ENSMOCG00000022763	-	51	94.958	Microtus_ochrogaster
ENSLACG00000004052	SRSF7	50	98.319	ENSMODG00000008669	-	99	83.613	Monodelphis_domestica
ENSLACG00000004052	SRSF7	50	99.160	MGP_CAROLIEiJ_G0021902	Srsf7	50	99.160	Mus_caroli
ENSLACG00000004052	SRSF7	50	99.160	ENSMUSG00000024097	Srsf7	87	99.160	Mus_musculus
ENSLACG00000004052	SRSF7	50	98.319	MGP_PahariEiJ_G0020891	Srsf7	50	98.319	Mus_pahari
ENSLACG00000004052	SRSF7	50	99.160	MGP_SPRETEiJ_G0022817	Srsf7	50	99.160	Mus_spretus
ENSLACG00000004052	SRSF7	50	90.756	ENSMLUG00000015692	-	53	90.756	Myotis_lucifugus
ENSLACG00000004052	SRSF7	50	98.319	ENSMLUG00000009536	SRSF7	99	81.590	Myotis_lucifugus
ENSLACG00000004052	SRSF7	50	99.160	ENSNGAG00000014431	Srsf7	99	82.008	Nannospalax_galili
ENSLACG00000004052	SRSF7	68	87.273	ENSNLEG00000016349	SRSF7	87	99.160	Nomascus_leucogenys
ENSLACG00000004052	SRSF7	95	72.294	ENSMEUG00000000773	-	57	94.545	Notamacropus_eugenii
ENSLACG00000004052	SRSF7	50	98.319	ENSMEUG00000016459	-	50	98.319	Notamacropus_eugenii
ENSLACG00000004052	SRSF7	50	99.160	ENSOPRG00000010234	SRSF7	52	99.160	Ochotona_princeps
ENSLACG00000004052	SRSF7	50	99.160	ENSODEG00000010029	-	99	82.008	Octodon_degus
ENSLACG00000004052	SRSF7	80	63.590	ENSODEG00000008570	-	60	80.000	Octodon_degus
ENSLACG00000004052	SRSF7	50	99.160	ENSOCUG00000004087	SRSF7	99	82.008	Oryctolagus_cuniculus
ENSLACG00000004052	SRSF7	72	50.575	ENSORLG00015004309	srsf3b	58	67.010	Oryzias_latipes_hsok
ENSLACG00000004052	SRSF7	72	50.575	ENSOMEG00000014893	srsf3b	64	67.010	Oryzias_melastigma
ENSLACG00000004052	SRSF7	68	87.273	ENSPPAG00000017907	SRSF7	99	82.427	Pan_paniscus
ENSLACG00000004052	SRSF7	50	99.160	ENSPPRG00000003682	SRSF7	55	99.160	Panthera_pardus
ENSLACG00000004052	SRSF7	50	99.160	ENSPTIG00000006350	SRSF7	55	99.160	Panthera_tigris_altaica
ENSLACG00000004052	SRSF7	68	87.273	ENSPTRG00000011851	SRSF7	99	82.427	Pan_troglodytes
ENSLACG00000004052	SRSF7	68	87.273	ENSPANG00000018079	SRSF7	99	82.427	Papio_anubis
ENSLACG00000004052	SRSF7	53	96.094	ENSPKIG00000017425	srsf7b	85	85.235	Paramormyrops_kingsleyae
ENSLACG00000004052	SRSF7	50	94.958	ENSPKIG00000022669	SRSF7	80	94.958	Paramormyrops_kingsleyae
ENSLACG00000004052	SRSF7	56	68.382	ENSPMGG00000021890	srsf7a	80	76.577	Periophthalmus_magnuspinnatus
ENSLACG00000004052	SRSF7	50	99.160	ENSPEMG00000015449	Srsf7	99	82.008	Peromyscus_maniculatus_bairdii
ENSLACG00000004052	SRSF7	76	63.243	ENSPMAG00000004472	srsf7a	54	77.358	Petromyzon_marinus
ENSLACG00000004052	SRSF7	50	94.118	ENSPCIG00000020726	-	88	94.118	Phascolarctos_cinereus
ENSLACG00000004052	SRSF7	50	98.319	ENSPCIG00000020694	-	87	98.319	Phascolarctos_cinereus
ENSLACG00000004052	SRSF7	50	90.083	ENSPFOG00000008820	srsf7b	52	89.916	Poecilia_formosa
ENSLACG00000004052	SRSF7	50	90.083	ENSPLAG00000023806	srsf7b	52	89.916	Poecilia_latipinna
ENSLACG00000004052	SRSF7	51	77.049	ENSPREG00000020685	srsf7a	86	78.378	Poecilia_reticulata
ENSLACG00000004052	SRSF7	50	90.083	ENSPREG00000006149	srsf7b	54	89.916	Poecilia_reticulata
ENSLACG00000004052	SRSF7	58	53.901	ENSPREG00000002610	-	62	71.579	Poecilia_reticulata
ENSLACG00000004052	SRSF7	50	99.160	ENSPCAG00000011348	SRSF7	52	99.160	Procavia_capensis
ENSLACG00000004052	SRSF7	50	75.630	ENSPCOG00000025051	-	99	70.293	Propithecus_coquereli
ENSLACG00000004052	SRSF7	50	96.667	ENSPCOG00000019422	-	54	99.145	Propithecus_coquereli
ENSLACG00000004052	SRSF7	55	88.636	ENSPCOG00000023721	-	80	88.189	Propithecus_coquereli
ENSLACG00000004052	SRSF7	50	99.160	ENSPVAG00000012076	SRSF7	52	99.160	Pteropus_vampyrus
ENSLACG00000004052	SRSF7	50	94.118	ENSPNAG00000012546	srsf7b	50	94.118	Pygocentrus_nattereri
ENSLACG00000004052	SRSF7	50	99.160	ENSRNOG00000027360	Srsf7	50	99.160	Rattus_norvegicus
ENSLACG00000004052	SRSF7	50	85.950	ENSRNOG00000008398	AABR07055789.1	72	86.555	Rattus_norvegicus
ENSLACG00000004052	SRSF7	64	86.538	ENSRBIG00000024695	SRSF7	90	83.190	Rhinopithecus_bieti
ENSLACG00000004052	SRSF7	50	99.160	ENSRROG00000005080	SRSF7	87	99.160	Rhinopithecus_roxellana
ENSLACG00000004052	SRSF7	68	87.273	ENSSBOG00000025074	SRSF7	87	99.160	Saimiri_boliviensis_boliviensis
ENSLACG00000004052	SRSF7	50	94.118	ENSSFOG00015007348	SRSF7	50	94.118	Scleropages_formosus
ENSLACG00000004052	SRSF7	50	94.958	ENSSFOG00015021911	srsf7b	99	74.104	Scleropages_formosus
ENSLACG00000004052	SRSF7	72	79.191	ENSSDUG00000021338	srsf7b	83	90.756	Seriola_dumerili
ENSLACG00000004052	SRSF7	72	73.563	ENSSLDG00000021463	srsf7b	67	92.437	Seriola_lalandi_dorsalis
ENSLACG00000004052	SRSF7	50	76.860	ENSSPAG00000022192	srsf7a	87	77.477	Stegastes_partitus
ENSLACG00000004052	SRSF7	50	92.562	ENSSPAG00000017204	srsf7b	84	92.437	Stegastes_partitus
ENSLACG00000004052	SRSF7	50	99.160	ENSSSCG00000008484	SRSF7	87	99.160	Sus_scrofa
ENSLACG00000004052	SRSF7	50	94.958	ENSTGUG00000002080	-	50	94.958	Taeniopygia_guttata
ENSLACG00000004052	SRSF7	50	95.798	ENSTGUG00000002095	SRSF7	99	80.478	Taeniopygia_guttata
ENSLACG00000004052	SRSF7	63	46.053	ENSTRUG00000024882	srsf3b	61	63.918	Takifugu_rubripes
ENSLACG00000004052	SRSF7	50	99.160	ENSUAMG00000025051	-	87	99.160	Ursus_americanus
ENSLACG00000004052	SRSF7	55	70.992	ENSUMAG00000023107	-	61	81.356	Ursus_maritimus
ENSLACG00000004052	SRSF7	50	99.160	ENSUMAG00000013534	SRSF7	99	82.008	Ursus_maritimus
ENSLACG00000004052	SRSF7	50	99.160	ENSVVUG00000018767	-	87	99.160	Vulpes_vulpes
ENSLACG00000004052	SRSF7	59	65.035	ENSVVUG00000006092	-	69	73.611	Vulpes_vulpes
ENSLACG00000004052	SRSF7	50	94.118	ENSXETG00000025300	srsf7	51	94.118	Xenopus_tropicalis
ENSLACG00000004052	SRSF7	52	89.516	ENSXCOG00000010843	srsf7b	81	89.916	Xiphophorus_couchianus
ENSLACG00000004052	SRSF7	59	53.147	ENSXCOG00000008757	-	58	71.579	Xiphophorus_couchianus
ENSLACG00000004052	SRSF7	51	77.049	ENSXCOG00000009381	srsf7a	86	77.477	Xiphophorus_couchianus
ENSLACG00000004052	SRSF7	58	53.901	ENSXMAG00000015454	-	58	71.579	Xiphophorus_maculatus