EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004055 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 2318 bases
Position: chrJH128356.1:107058-109375
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004557	RVT_1	PF00078.27	2.8e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004596	-	2106	-	ENSLACP00000004557	701 (aa)	-	H3A4I6

Gene Model

Click here to download ENSLACG00000004055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004055's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004055	-	57	38.756	ENSLACG00000014320	-	63	38.756
ENSLACG00000004055	-	98	30.112	ENSLACG00000003785	-	99	30.112
ENSLACG00000004055	-	51	31.217	ENSLACG00000014709	-	93	31.217
ENSLACG00000004055	-	57	34.135	ENSLACG00000003646	-	59	34.135
ENSLACG00000004055	-	72	33.652	ENSLACG00000013588	-	71	32.824
ENSLACG00000004055	-	99	32.109	ENSLACG00000014846	-	76	32.381
ENSLACG00000004055	-	99	31.310	ENSLACG00000006186	-	83	31.215
ENSLACG00000004055	-	98	42.676	ENSLACG00000006252	-	98	42.676

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004055	-	52	32.620	ENSACLG00000004686	-	87	32.540	Astatotilapia_calliptera
ENSLACG00000004055	-	60	30.926	ENSAMXG00000029153	-	88	30.926	Astyanax_mexicanus
ENSLACG00000004055	-	55	30.077	ENSAMXG00000035618	-	83	30.077	Astyanax_mexicanus
ENSLACG00000004055	-	53	31.915	ENSAMXG00000034279	-	66	31.915	Astyanax_mexicanus
ENSLACG00000004055	-	99	33.745	ENSAMXG00000041658	-	86	33.608	Astyanax_mexicanus
ENSLACG00000004055	-	86	36.725	ENSCSAVG00000005792	-	72	37.143	Ciona_savignyi
ENSLACG00000004055	-	99	36.376	ENSIPUG00000019854	-	73	36.376	Ictalurus_punctatus
ENSLACG00000004055	-	96	32.511	ENSLOCG00000016057	-	78	32.511	Lepisosteus_oculatus
ENSLACG00000004055	-	76	31.341	ENSLOCG00000010271	-	70	31.636	Lepisosteus_oculatus
ENSLACG00000004055	-	74	31.648	ENSORLG00015007384	-	93	31.461	Oryzias_latipes_hsok