EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000004058 (Gene tree)
Gene ID: 102361589
Gene Symbol: RRS1
Alias: KIAA0112
Full Name: ribosome biogenesis regulator homolog
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 987 bases
Position: chrJH130278.1:107147-108133
Accession: 102361589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004560	RRS1	PF04939.12	8e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004599	RRS1-201	987	XM_006012990	ENSLACP00000004560	329 (aa)	XP_006013052	H3A4I9

Gene Model

Click here to download ENSLACG00000004058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004058's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004058	RRS1	95	66.984	ENSG00000179041	RRS1	85	67.097	Homo_sapiens
ENSLACG00000004058	RRS1	96	72.152	ENSATEG00000011743	rrs1	88	72.492	Anabas_testudineus
ENSLACG00000004058	RRS1	99	66.869	ENSANAG00000018116	RRS1	85	68.065	Aotus_nancymaae
ENSLACG00000004058	RRS1	95	70.288	ENSAMXG00000037893	rrs1	80	70.874	Astyanax_mexicanus
ENSLACG00000004058	RRS1	99	65.350	ENSBTAG00000016716	RRS1	85	66.774	Bos_taurus
ENSLACG00000004058	RRS1	90	43.131	WBGene00007617	rrbs-1	89	43.564	Caenorhabditis_elegans
ENSLACG00000004058	RRS1	99	65.957	ENSCJAG00000022034	RRS1	85	67.419	Callithrix_jacchus
ENSLACG00000004058	RRS1	95	66.454	ENSCAFG00000007313	RRS1	85	66.452	Canis_familiaris
ENSLACG00000004058	RRS1	95	66.454	ENSCAFG00020016049	-	85	66.452	Canis_lupus_dingo
ENSLACG00000004058	RRS1	95	66.454	ENSCAFG00020020365	-	85	66.452	Canis_lupus_dingo
ENSLACG00000004058	RRS1	95	66.667	ENSCHIG00000009141	RRS1	85	66.774	Capra_hircus
ENSLACG00000004058	RRS1	98	66.049	ENSCPOG00000000647	RRS1	85	67.213	Cavia_porcellus
ENSLACG00000004058	RRS1	99	66.565	ENSCCAG00000032186	RRS1	85	68.065	Cebus_capucinus
ENSLACG00000004058	RRS1	95	67.619	ENSCATG00000016944	RRS1	85	67.742	Cercocebus_atys
ENSLACG00000004058	RRS1	95	67.302	ENSCSAG00000018552	RRS1	85	67.419	Chlorocebus_sabaeus
ENSLACG00000004058	RRS1	95	67.302	ENSCHOG00000002455	RRS1	85	67.419	Choloepus_hoffmanni
ENSLACG00000004058	RRS1	95	57.585	ENSCPBG00000021374	RRS1	90	57.595	Chrysemys_picta_bellii
ENSLACG00000004058	RRS1	94	53.846	ENSCING00000002177	-	94	54.276	Ciona_intestinalis
ENSLACG00000004058	RRS1	96	53.605	ENSCSAVG00000011819	-	93	54.485	Ciona_savignyi
ENSLACG00000004058	RRS1	99	66.261	ENSCANG00000012718	RRS1	85	67.742	Colobus_angolensis_palliatus
ENSLACG00000004058	RRS1	99	65.350	ENSCGRG00001002391	-	85	66.452	Cricetulus_griseus_chok1gshd
ENSLACG00000004058	RRS1	99	64.742	ENSCGRG00001015575	-	89	66.129	Cricetulus_griseus_chok1gshd
ENSLACG00000004058	RRS1	92	60.265	ENSCSEG00000014750	rrs1	85	59.871	Cynoglossus_semilaevis
ENSLACG00000004058	RRS1	92	63.487	ENSCVAG00000017878	rrs1	86	63.607	Cyprinodon_variegatus
ENSLACG00000004058	RRS1	91	76.589	ENSDARG00000003941	rrs1	88	75.658	Danio_rerio
ENSLACG00000004058	RRS1	95	66.349	ENSDNOG00000017900	RRS1	84	66.452	Dasypus_novemcinctus
ENSLACG00000004058	RRS1	66	67.580	ENSDORG00000026331	Rrs1	81	68.224	Dipodomys_ordii
ENSLACG00000004058	RRS1	90	48.026	FBgn0052409	CG32409	86	47.869	Drosophila_melanogaster
ENSLACG00000004058	RRS1	61	63.184	ENSETEG00000000935	-	55	63.184	Echinops_telfairi
ENSLACG00000004058	RRS1	94	55.844	ENSEBUG00000013506	rrs1	96	55.789	Eptatretus_burgeri
ENSLACG00000004058	RRS1	95	67.302	ENSEASG00005001691	RRS1	85	67.419	Equus_asinus_asinus
ENSLACG00000004058	RRS1	99	65.854	ENSECAG00000004492	RRS1	92	67.419	Equus_caballus
ENSLACG00000004058	RRS1	95	66.032	ENSEEUG00000013719	RRS1	85	66.129	Erinaceus_europaeus
ENSLACG00000004058	RRS1	95	66.773	ENSFCAG00000014332	RRS1	85	66.774	Felis_catus
ENSLACG00000004058	RRS1	95	55.901	ENSGALG00000030890	RRS1	89	55.660	Gallus_gallus
ENSLACG00000004058	RRS1	96	69.206	ENSGACG00000002969	rrs1	87	69.579	Gasterosteus_aculeatus
ENSLACG00000004058	RRS1	95	56.875	ENSGAGG00000023718	RRS1	87	57.278	Gopherus_agassizii
ENSLACG00000004058	RRS1	95	67.619	ENSGGOG00000026663	RRS1	85	67.742	Gorilla_gorilla
ENSLACG00000004058	RRS1	98	67.802	ENSHGLG00000021423	RRS1	85	67.742	Heterocephalus_glaber_female
ENSLACG00000004058	RRS1	98	67.802	ENSHGLG00100020640	RRS1	85	67.742	Heterocephalus_glaber_male
ENSLACG00000004058	RRS1	99	68.788	ENSHCOG00000015358	rrs1	86	70.130	Hippocampus_comes
ENSLACG00000004058	RRS1	91	75.920	ENSIPUG00000014412	rrs1	89	74.110	Ictalurus_punctatus
ENSLACG00000004058	RRS1	95	67.937	ENSSTOG00000026310	RRS1	85	68.065	Ictidomys_tridecemlineatus
ENSLACG00000004058	RRS1	92	67.541	ENSJJAG00000011507	-	84	67.742	Jaculus_jaculus
ENSLACG00000004058	RRS1	84	61.290	ENSJJAG00000020395	-	81	61.290	Jaculus_jaculus
ENSLACG00000004058	RRS1	98	68.827	ENSKMAG00000008238	rrs1	91	70.227	Kryptolebias_marmoratus
ENSLACG00000004058	RRS1	95	78.135	ENSLOCG00000017812	rrs1	89	78.947	Lepisosteus_oculatus
ENSLACG00000004058	RRS1	95	66.984	ENSLAFG00000015405	RRS1	84	67.097	Loxodonta_africana
ENSLACG00000004058	RRS1	95	67.619	ENSMFAG00000042747	RRS1	85	67.742	Macaca_fascicularis
ENSLACG00000004058	RRS1	95	67.619	ENSMMUG00000000886	RRS1	85	67.742	Macaca_mulatta
ENSLACG00000004058	RRS1	95	67.619	ENSMNEG00000011696	RRS1	85	67.742	Macaca_nemestrina
ENSLACG00000004058	RRS1	95	67.619	ENSMLEG00000004794	RRS1	85	67.742	Mandrillus_leucophaeus
ENSLACG00000004058	RRS1	90	73.401	ENSMZEG00005004349	RRS1	87	72.168	Maylandia_zebra
ENSLACG00000004058	RRS1	99	65.957	ENSMAUG00000005392	Rrs1	84	67.541	Mesocricetus_auratus
ENSLACG00000004058	RRS1	99	65.350	ENSMOCG00000015862	Rrs1	80	66.452	Microtus_ochrogaster
ENSLACG00000004058	RRS1	98	64.087	ENSMODG00000024952	RRS1	84	66.340	Monodelphis_domestica
ENSLACG00000004058	RRS1	99	65.653	MGP_CAROLIEiJ_G0013936	Rrs1	85	67.097	Mus_caroli
ENSLACG00000004058	RRS1	99	65.653	ENSMUSG00000061024	Rrs1	85	67.097	Mus_musculus
ENSLACG00000004058	RRS1	99	65.046	MGP_PahariEiJ_G0023883	Rrs1	85	66.452	Mus_pahari
ENSLACG00000004058	RRS1	99	65.653	MGP_SPRETEiJ_G0014739	Rrs1	85	67.097	Mus_spretus
ENSLACG00000004058	RRS1	99	66.261	ENSMPUG00000018626	RRS1	83	67.419	Mustela_putorius_furo
ENSLACG00000004058	RRS1	99	65.957	ENSNGAG00000012904	Rrs1	85	68.065	Nannospalax_galili
ENSLACG00000004058	RRS1	73	69.583	ENSNLEG00000027730	RRS1	78	69.038	Nomascus_leucogenys
ENSLACG00000004058	RRS1	90	73.401	ENSONIG00000014187	rrs1	90	72.168	Oreochromis_niloticus
ENSLACG00000004058	RRS1	95	59.873	ENSOANG00000012348	RRS1	84	59.807	Ornithorhynchus_anatinus
ENSLACG00000004058	RRS1	95	68.371	ENSOCUG00000013490	RRS1	84	68.387	Oryctolagus_cuniculus
ENSLACG00000004058	RRS1	95	62.420	ENSOMEG00000008525	rrs1	87	62.745	Oryzias_melastigma
ENSLACG00000004058	RRS1	99	64.742	ENSOGAG00000001085	RRS1	85	66.129	Otolemur_garnettii
ENSLACG00000004058	RRS1	95	62.222	ENSOARG00000017417	RRS1	82	62.258	Ovis_aries
ENSLACG00000004058	RRS1	95	67.302	ENSPPAG00000024378	RRS1	85	67.419	Pan_paniscus
ENSLACG00000004058	RRS1	95	66.773	ENSPPRG00000021408	RRS1	85	66.774	Panthera_pardus
ENSLACG00000004058	RRS1	95	66.984	ENSPTRG00000030988	RRS1	85	67.097	Pan_troglodytes
ENSLACG00000004058	RRS1	95	49.045	ENSPANG00000035974	RRS1	81	49.515	Papio_anubis
ENSLACG00000004058	RRS1	91	72.148	ENSPKIG00000007953	rrs1	90	70.358	Paramormyrops_kingsleyae
ENSLACG00000004058	RRS1	99	65.046	ENSPEMG00000014427	Rrs1	85	66.774	Peromyscus_maniculatus_bairdii
ENSLACG00000004058	RRS1	90	64.646	ENSPMAG00000006513	rrs1	81	63.192	Petromyzon_marinus
ENSLACG00000004058	RRS1	92	65.359	ENSPCIG00000026695	RRS1	85	65.359	Phascolarctos_cinereus
ENSLACG00000004058	RRS1	90	77.104	ENSPFOG00000020722	rrs1	94	76.393	Poecilia_formosa
ENSLACG00000004058	RRS1	92	64.901	ENSPREG00000019960	rrs1	85	64.918	Poecilia_reticulata
ENSLACG00000004058	RRS1	90	67.905	ENSPPYG00000018637	RRS1	99	67.905	Pongo_abelii
ENSLACG00000004058	RRS1	99	65.957	ENSPCAG00000009115	RRS1	85	67.097	Procavia_capensis
ENSLACG00000004058	RRS1	88	76.289	ENSPNAG00000021707	rrs1	84	76.094	Pygocentrus_nattereri
ENSLACG00000004058	RRS1	93	67.857	ENSRNOG00000007240	Rrs1	85	68.065	Rattus_norvegicus
ENSLACG00000004058	RRS1	95	67.302	ENSRBIG00000009132	RRS1	85	67.419	Rhinopithecus_bieti
ENSLACG00000004058	RRS1	95	67.302	ENSRROG00000013472	RRS1	85	67.419	Rhinopithecus_roxellana
ENSLACG00000004058	RRS1	94	67.314	ENSSBOG00000011006	-	87	67.419	Saimiri_boliviensis_boliviensis
ENSLACG00000004058	RRS1	92	66.776	ENSSBOG00000012639	-	86	66.340	Saimiri_boliviensis_boliviensis
ENSLACG00000004058	RRS1	89	56.507	ENSSFOG00015015772	rrs1	84	55.482	Scleropages_formosus
ENSLACG00000004058	RRS1	90	72.881	ENSSMAG00000015226	rrs1	83	71.854	Scophthalmus_maximus
ENSLACG00000004058	RRS1	75	63.281	ENSSARG00000006976	RRS1	66	63.415	Sorex_araneus
ENSLACG00000004058	RRS1	95	66.984	ENSSSCG00000006214	RRS1	85	67.097	Sus_scrofa
ENSLACG00000004058	RRS1	94	70.645	ENSTRUG00000008796	rrs1	88	73.103	Takifugu_rubripes
ENSLACG00000004058	RRS1	90	74.747	ENSTNIG00000004026	rrs1	91	73.786	Tetraodon_nigroviridis
ENSLACG00000004058	RRS1	95	66.984	ENSTBEG00000014752	RRS1	85	67.097	Tupaia_belangeri
ENSLACG00000004058	RRS1	99	66.261	ENSUAMG00000008502	RRS1	85	67.097	Ursus_americanus
ENSLACG00000004058	RRS1	95	66.454	ENSVVUG00000018452	RRS1	85	66.452	Vulpes_vulpes
ENSLACG00000004058	RRS1	90	77.778	ENSXCOG00000009809	rrs1	86	77.049	Xiphophorus_couchianus