EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004191 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 2166 bases
Position: chrJH127578.1:112720-114885
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	1	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	2	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	3	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	4	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	5	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	6	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	7	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	8	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	9	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	10	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	11	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	12	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	13	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	14	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	15	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	16	17
ENSLACP00000004712	zf-C2H2	PF00096.26	1.2e-104	17	17
ENSLACP00000004712	zf-met	PF12874.7	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004751	-	2166	-	ENSLACP00000004712	721 (aa)	-	H3A4Z1

Gene Model

Click here to download ENSLACG00000004191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004191's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004191	-	69	33.333	ENSLACG00000011247	OVOL2	53	37.288
ENSLACG00000004191	-	93	54.907	ENSLACG00000022211	-	99	54.907
ENSLACG00000004191	-	77	35.897	ENSLACG00000012406	ZNF423	92	35.897
ENSLACG00000004191	-	73	43.750	ENSLACG00000010143	ZNF384	53	35.500
ENSLACG00000004191	-	71	60.000	ENSLACG00000011466	ZBTB24	59	60.000
ENSLACG00000004191	-	76	41.739	ENSLACG00000005264	-	96	41.739
ENSLACG00000004191	-	77	39.815	ENSLACG00000007021	ZNF521	96	39.815
ENSLACG00000004191	-	74	47.619	ENSLACG00000010025	ZNF581	85	48.515
ENSLACG00000004191	-	78	38.359	ENSLACG00000000891	ZNF319	93	37.660
ENSLACG00000004191	-	76	43.243	ENSLACG00000010627	ZNF236	55	43.243
ENSLACG00000004191	-	83	36.165	ENSLACG00000009187	PRDM5	85	36.165
ENSLACG00000004191	-	83	43.874	ENSLACG00000017381	-	99	43.874
ENSLACG00000004191	-	77	37.093	ENSLACG00000009642	-	99	37.093
ENSLACG00000004191	-	74	40.933	ENSLACG00000017590	-	60	40.933
ENSLACG00000004191	-	71	38.400	ENSLACG00000005413	snai2	93	38.400
ENSLACG00000004191	-	78	37.671	ENSLACG00000009005	-	99	37.903
ENSLACG00000004191	-	97	50.711	ENSLACG00000014708	-	95	50.667
ENSLACG00000004191	-	72	37.600	ENSLACG00000017707	SNAI1	56	37.600
ENSLACG00000004191	-	79	37.329	ENSLACG00000007310	-	100	34.800
ENSLACG00000004191	-	70	37.313	ENSLACG00000003588	SCRT1	54	37.313
ENSLACG00000004191	-	77	43.478	ENSLACG00000012207	GFI1B	67	43.478
ENSLACG00000004191	-	71	35.570	ENSLACG00000010161	MAZ	76	31.373
ENSLACG00000004191	-	73	30.698	ENSLACG00000010551	ZFAT	51	30.698

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004191	-	79	52.878	ENSBTAG00000038088	-	99	52.878	Bos_taurus
ENSLACG00000004191	-	94	53.519	ENSCAFG00000029340	-	100	53.519	Canis_familiaris
ENSLACG00000004191	-	93	52.847	ENSCAFG00020014929	-	100	52.847	Canis_lupus_dingo
ENSLACG00000004191	-	79	53.519	ENSCAFG00020014950	-	96	53.519	Canis_lupus_dingo
ENSLACG00000004191	-	91	60.325	ENSCPBG00000017494	-	99	59.383	Chrysemys_picta_bellii
ENSLACG00000004191	-	79	53.237	ENSEASG00005020335	-	97	53.237	Equus_asinus_asinus
ENSLACG00000004191	-	79	51.977	ENSEASG00005020355	-	92	51.977	Equus_asinus_asinus
ENSLACG00000004191	-	78	52.857	ENSECAG00000002193	-	97	52.857	Equus_caballus
ENSLACG00000004191	-	92	51.404	ENSECAG00000002021	-	99	50.928	Equus_caballus
ENSLACG00000004191	-	91	51.977	ENSECAG00000013505	-	98	51.977	Equus_caballus
ENSLACG00000004191	-	91	59.072	ENSGAGG00000020594	-	99	57.742	Gopherus_agassizii
ENSLACG00000004191	-	79	51.053	ENSMPUG00000008442	-	99	51.053	Mustela_putorius_furo
ENSLACG00000004191	-	94	53.571	ENSMPUG00000006213	-	91	53.571	Mustela_putorius_furo
ENSLACG00000004191	-	93	52.878	ENSOARG00000003770	-	97	52.878	Ovis_aries
ENSLACG00000004191	-	91	48.148	ENSPPAG00000037706	-	96	48.148	Pan_paniscus
ENSLACG00000004191	-	91	48.000	ENSPSIG00000004614	-	98	48.000	Pelodiscus_sinensis
ENSLACG00000004191	-	91	54.197	ENSSBOG00000022380	-	96	52.244	Saimiri_boliviensis_boliviensis
ENSLACG00000004191	-	93	52.222	ENSSSCG00000031774	-	99	52.222	Sus_scrofa
ENSLACG00000004191	-	79	54.423	ENSUAMG00000027381	-	99	54.423	Ursus_americanus
ENSLACG00000004191	-	83	52.236	ENSUAMG00000028270	-	90	52.236	Ursus_americanus
ENSLACG00000004191	-	79	54.423	ENSUMAG00000004061	-	99	54.423	Ursus_maritimus
ENSLACG00000004191	-	91	50.320	ENSUMAG00000004054	-	95	48.964	Ursus_maritimus
ENSLACG00000004191	-	79	53.519	ENSVVUG00000001996	-	96	53.519	Vulpes_vulpes
ENSLACG00000004191	-	78	51.589	ENSVVUG00000002085	-	90	50.395	Vulpes_vulpes