EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004233 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 7465 bases
Position: chrJH130133.1:114210-121674
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004762	RVT_1	PF00078.27	2.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004804	-	981	-	ENSLACP00000004763	327 (aa)	-	H3A542
ENSLACT00000004805	-	1368	-	ENSLACP00000004764	456 (aa)	-	H3A543
ENSLACT00000004803	-	1908	-	ENSLACP00000004762	636 (aa)	-	H3A541

Gene Model

Click here to download ENSLACG00000004233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004233	-	74	32.797	ENSLACG00000013633	-	94	32.797
ENSLACG00000004233	-	79	52.830	ENSLACG00000004832	-	92	52.830
ENSLACG00000004233	-	77	65.619	ENSLACG00000001271	-	97	67.213
ENSLACG00000004233	-	73	32.535	ENSLACG00000001539	-	98	32.535
ENSLACG00000004233	-	99	56.012	ENSLACG00000012911	-	98	56.012
ENSLACG00000004233	-	94	32.905	ENSLACG00000006107	-	99	32.905
ENSLACG00000004233	-	99	49.771	ENSLACG00000013644	-	78	49.771
ENSLACG00000004233	-	84	32.042	ENSLACG00000016962	-	98	31.979
ENSLACG00000004233	-	75	43.326	ENSLACG00000005758	-	95	42.300
ENSLACG00000004233	-	89	31.063	ENSLACG00000012377	-	63	31.063

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004233	-	99	39.486	ENSACLG00000005419	-	83	39.486	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.450	ENSACLG00000002775	-	64	39.450	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.183	ENSACLG00000009148	-	69	39.334	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.183	ENSACLG00000013139	-	73	39.183	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.486	ENSACLG00000019948	-	59	39.486	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.486	ENSACLG00000021834	-	63	39.486	Astatotilapia_calliptera
ENSLACG00000004233	-	94	39.711	ENSACLG00000021830	-	71	39.711	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000017721	-	83	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	98	39.753	ENSACLG00000025178	-	68	39.753	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000017606	-	63	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000016079	-	63	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000011507	-	59	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	40.212	ENSACLG00000006057	-	84	40.212	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000017392	-	60	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.788	ENSACLG00000004963	-	84	39.788	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.486	ENSACLG00000014121	-	59	39.486	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000022388	-	59	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000013632	-	58	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.486	ENSACLG00000013988	-	63	39.486	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.183	ENSACLG00000009407	-	59	39.183	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000013574	-	68	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000007447	-	59	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000003607	-	64	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000018006	-	69	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.032	ENSACLG00000013967	-	64	39.032	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000007511	-	59	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.032	ENSACLG00000002396	-	59	39.032	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.637	ENSACLG00000003757	-	59	39.637	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.454	ENSACLG00000019821	-	58	39.454	Astatotilapia_calliptera
ENSLACG00000004233	-	100	39.275	ENSACLG00000021406	-	74	39.275	Astatotilapia_calliptera
ENSLACG00000004233	-	99	39.542	ENSMZEG00005028496	-	64	39.542	Maylandia_zebra
ENSLACG00000004233	-	99	39.909	ENSORLG00000028038	-	59	39.909	Oryzias_latipes
ENSLACG00000004233	-	99	39.051	ENSORLG00000028428	-	56	39.051	Oryzias_latipes
ENSLACG00000004233	-	99	40.000	ENSORLG00000025660	-	77	40.000	Oryzias_latipes
ENSLACG00000004233	-	99	39.605	ENSORLG00000026631	-	59	39.605	Oryzias_latipes
ENSLACG00000004233	-	94	40.484	ENSORLG00000023528	-	76	40.484	Oryzias_latipes
ENSLACG00000004233	-	99	39.909	ENSORLG00000027125	-	73	39.909	Oryzias_latipes
ENSLACG00000004233	-	99	39.909	ENSORLG00000028072	-	73	39.909	Oryzias_latipes
ENSLACG00000004233	-	99	39.909	ENSORLG00000023099	-	69	39.909	Oryzias_latipes
ENSLACG00000004233	-	99	39.757	ENSORLG00000022216	-	78	39.757	Oryzias_latipes
ENSLACG00000004233	-	99	39.454	ENSORLG00000025841	-	60	39.454	Oryzias_latipes
ENSLACG00000004233	-	99	39.909	ENSORLG00020020703	-	73	39.909	Oryzias_latipes_hni
ENSLACG00000004233	-	99	39.909	ENSORLG00020010783	-	59	39.909	Oryzias_latipes_hni
ENSLACG00000004233	-	99	39.757	ENSORLG00020006197	-	77	39.757	Oryzias_latipes_hni
ENSLACG00000004233	-	99	39.757	ENSORLG00020020895	-	73	39.757	Oryzias_latipes_hni
ENSLACG00000004233	-	94	39.840	ENSORLG00020004983	-	58	39.840	Oryzias_latipes_hni
ENSLACG00000004233	-	99	40.181	ENSPREG00000022240	-	59	40.181	Poecilia_reticulata
ENSLACG00000004233	-	99	40.000	ENSXMAG00000021428	-	77	40.000	Xiphophorus_maculatus