EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000004304 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: si:ch211-113e8.11
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 573 bases
Position: chrJH130574.1:117372-117944
Accession: ZDB-GENE-090313-12
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004840	zf-CCCH	PF00642.24	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004882	-	573	-	ENSLACP00000004840	190 (aa)	-	H3A5B9

Gene Model

Click here to download ENSLACG00000004304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004304's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004304	si:ch211-113e8.11	77	42.405	ENSAPOG00000010990	si:ch211-113e8.11	68	40.884	Acanthochromis_polyacanthus
ENSLACG00000004304	si:ch211-113e8.11	69	43.357	ENSACIG00000011566	si:ch211-113e8.11	81	42.012	Amphilophus_citrinellus
ENSLACG00000004304	si:ch211-113e8.11	77	42.405	ENSAOCG00000022156	si:ch211-113e8.11	61	41.772	Amphiprion_ocellaris
ENSLACG00000004304	si:ch211-113e8.11	77	42.405	ENSAPEG00000018284	si:ch211-113e8.11	61	41.772	Amphiprion_percula
ENSLACG00000004304	si:ch211-113e8.11	86	39.205	ENSATEG00000018391	si:ch211-113e8.11	71	41.379	Anabas_testudineus
ENSLACG00000004304	si:ch211-113e8.11	77	43.226	ENSACLG00000017011	si:ch211-113e8.11	73	42.373	Astatotilapia_calliptera
ENSLACG00000004304	si:ch211-113e8.11	73	43.312	ENSAMXG00000000733	si:ch211-113e8.11	60	43.312	Astyanax_mexicanus
ENSLACG00000004304	si:ch211-113e8.11	73	43.791	ENSCSEG00000004538	si:ch211-113e8.11	59	42.000	Cynoglossus_semilaevis
ENSLACG00000004304	si:ch211-113e8.11	85	41.477	ENSCVAG00000020156	si:ch211-113e8.11	72	37.895	Cyprinodon_variegatus
ENSLACG00000004304	si:ch211-113e8.11	62	45.161	ENSDARG00000076585	si:ch211-113e8.11	61	44.366	Danio_rerio
ENSLACG00000004304	si:ch211-113e8.11	89	33.908	FBgn0259728	CG42382	63	39.837	Drosophila_melanogaster
ENSLACG00000004304	si:ch211-113e8.11	93	38.000	ENSELUG00000001130	si:ch211-113e8.11	70	38.378	Esox_lucius
ENSLACG00000004304	si:ch211-113e8.11	83	43.529	ENSFHEG00000007870	si:ch211-113e8.11	71	45.181	Fundulus_heteroclitus
ENSLACG00000004304	si:ch211-113e8.11	77	45.513	ENSGAFG00000020570	si:ch211-113e8.11	63	45.513	Gambusia_affinis
ENSLACG00000004304	si:ch211-113e8.11	77	43.226	ENSHBUG00000003552	si:ch211-113e8.11	73	41.808	Haplochromis_burtoni
ENSLACG00000004304	si:ch211-113e8.11	74	43.919	ENSHCOG00000002041	si:ch211-113e8.11	61	46.622	Hippocampus_comes
ENSLACG00000004304	si:ch211-113e8.11	71	45.139	ENSIPUG00000002260	si:ch211-113e8.11	59	43.662	Ictalurus_punctatus
ENSLACG00000004304	si:ch211-113e8.11	75	41.830	ENSKMAG00000000086	si:ch211-113e8.11	62	43.137	Kryptolebias_marmoratus
ENSLACG00000004304	si:ch211-113e8.11	77	42.857	ENSLBEG00000008353	si:ch211-113e8.11	60	40.123	Labrus_bergylta
ENSLACG00000004304	si:ch211-113e8.11	87	40.541	ENSMAMG00000019098	si:ch211-113e8.11	64	39.752	Mastacembelus_armatus
ENSLACG00000004304	si:ch211-113e8.11	77	43.226	ENSMZEG00005023658	si:ch211-113e8.11	76	42.373	Maylandia_zebra
ENSLACG00000004304	si:ch211-113e8.11	82	42.424	ENSMMOG00000007254	si:ch211-113e8.11	75	41.317	Mola_mola
ENSLACG00000004304	si:ch211-113e8.11	83	43.750	ENSMALG00000005110	si:ch211-113e8.11	71	40.341	Monopterus_albus
ENSLACG00000004304	si:ch211-113e8.11	77	43.226	ENSNBRG00000015060	si:ch211-113e8.11	73	42.373	Neolamprologus_brichardi
ENSLACG00000004304	si:ch211-113e8.11	87	39.362	ENSORLG00000023699	si:ch211-113e8.11	74	40.437	Oryzias_latipes
ENSLACG00000004304	si:ch211-113e8.11	87	39.247	ENSORLG00020022094	si:ch211-113e8.11	74	39.130	Oryzias_latipes_hni
ENSLACG00000004304	si:ch211-113e8.11	87	40.957	ENSORLG00015002588	si:ch211-113e8.11	74	41.530	Oryzias_latipes_hsok
ENSLACG00000004304	si:ch211-113e8.11	74	41.611	ENSOMEG00000010624	si:ch211-113e8.11	74	38.919	Oryzias_melastigma
ENSLACG00000004304	si:ch211-113e8.11	66	47.482	ENSPKIG00000023576	si:ch211-113e8.11	56	47.482	Paramormyrops_kingsleyae
ENSLACG00000004304	si:ch211-113e8.11	78	41.250	ENSPMGG00000018547	si:ch211-113e8.11	66	38.854	Periophthalmus_magnuspinnatus
ENSLACG00000004304	si:ch211-113e8.11	75	44.371	ENSPFOG00000007950	si:ch211-113e8.11	62	44.371	Poecilia_formosa
ENSLACG00000004304	si:ch211-113e8.11	77	44.231	ENSPLAG00000002081	si:ch211-113e8.11	63	44.231	Poecilia_latipinna
ENSLACG00000004304	si:ch211-113e8.11	77	44.737	ENSPMEG00000017505	si:ch211-113e8.11	63	44.079	Poecilia_mexicana
ENSLACG00000004304	si:ch211-113e8.11	77	44.872	ENSPREG00000008530	si:ch211-113e8.11	64	43.871	Poecilia_reticulata
ENSLACG00000004304	si:ch211-113e8.11	77	42.581	ENSPNYG00000022856	si:ch211-113e8.11	73	41.808	Pundamilia_nyererei
ENSLACG00000004304	si:ch211-113e8.11	66	43.478	ENSPNAG00000013782	si:ch211-113e8.11	68	40.476	Pygocentrus_nattereri
ENSLACG00000004304	si:ch211-113e8.11	86	43.258	ENSSFOG00015000959	si:ch211-113e8.11	68	42.442	Scleropages_formosus
ENSLACG00000004304	si:ch211-113e8.11	73	39.759	ENSSMAG00000009732	si:ch211-113e8.11	68	40.116	Scophthalmus_maximus
ENSLACG00000004304	si:ch211-113e8.11	73	43.976	ENSSDUG00000000112	si:ch211-113e8.11	75	39.175	Seriola_dumerili
ENSLACG00000004304	si:ch211-113e8.11	83	42.162	ENSSLDG00000003287	si:ch211-113e8.11	75	38.660	Seriola_lalandi_dorsalis
ENSLACG00000004304	si:ch211-113e8.11	84	46.429	ENSSPAG00000001375	si:ch211-113e8.11	63	44.643	Stegastes_partitus
ENSLACG00000004304	si:ch211-113e8.11	92	37.766	ENSTRUG00000023898	si:ch211-113e8.11	61	39.474	Takifugu_rubripes
ENSLACG00000004304	si:ch211-113e8.11	77	46.711	ENSXMAG00000024104	si:ch211-113e8.11	63	46.711	Xiphophorus_maculatus