EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLACG00000004324 (Gene tree)
Gene ID
102348798
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Plus strand
Length
136112 bases
Position
chrJH129020.1:118407-254518
Accession
102348798
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000004865RRM_1PF00076.221.8e-3312
ENSLACP00000004865RRM_1PF00076.221.8e-3322
ENSLACP00000004866RRM_1PF00076.222.9e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000004907RBMS1-2014007XM_006010781ENSLACP00000004865408 (aa)XP_006010843H3A5E4
ENSLACT00000004908RBMS1-202876-ENSLACP00000004866291 (aa)-H3A5E5
Gene Model
Click here to download ENSLACG00000004324's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004324's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLACG00000004324RBMS15235.747ENSLACG00000008316ELAVL46338.506
ENSLACG00000004324RBMS110064.078ENSLACG00000010581RBMS39570.516
ENSLACG00000004324RBMS19960.069ENSLACG00000018651RBMS29864.198
ENSLACG00000004324RBMS15036.967ENSLACG00000010888ELAVL26338.251
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000004324RBMS110075.945ENSG00000153250RBMS110089.844Homo_sapiens
ENSLACG00000004324RBMS19862.563ENSAPOG00000013761rbms1a9962.814Acanthochromis_polyacanthus
ENSLACG00000004324RBMS19977.419ENSAPOG00000024437-10077.419Acanthochromis_polyacanthus
ENSLACG00000004324RBMS19579.284ENSAMEG00000012661RBMS19980.051Ailuropoda_melanoleuca
ENSLACG00000004324RBMS19973.945ENSACIG00000021498RBMS19774.690Amphilophus_citrinellus
ENSLACG00000004324RBMS19856.784ENSACIG00000000113rbms1a9956.784Amphilophus_citrinellus
ENSLACG00000004324RBMS19976.427ENSAOCG00000014482-10077.171Amphiprion_ocellaris
ENSLACG00000004324RBMS19862.563ENSAOCG00000010066rbms1a9962.814Amphiprion_ocellaris
ENSLACG00000004324RBMS19976.179ENSAPEG00000018371-10076.923Amphiprion_percula
ENSLACG00000004324RBMS19862.563ENSAPEG00000023563rbms1a9962.814Amphiprion_percula
ENSLACG00000004324RBMS19976.179ENSATEG00000018573RBMS110076.427Anabas_testudineus
ENSLACG00000004324RBMS19862.814ENSATEG00000015450rbms1a9963.065Anabas_testudineus
ENSLACG00000004324RBMS110079.038ENSAPLG00000007282RBMS19684.456Anas_platyrhynchos
ENSLACG00000004324RBMS19684.518ENSACAG00000011984RBMS18581.490Anolis_carolinensis
ENSLACG00000004324RBMS110076.289ENSANAG00000024424RBMS110083.077Aotus_nancymaae
ENSLACG00000004324RBMS19862.060ENSACLG00000021512rbms1a9962.060Astatotilapia_calliptera
ENSLACG00000004324RBMS19973.697ENSACLG00000013048RBMS110074.442Astatotilapia_calliptera
ENSLACG00000004324RBMS19976.923ENSAMXG00000009969RBMS110077.984Astyanax_mexicanus
ENSLACG00000004324RBMS19974.442ENSAMXG00000002146rbms1a9974.442Astyanax_mexicanus
ENSLACG00000004324RBMS19680.916ENSBTAG00000005180RBMS110080.196Bos_taurus
ENSLACG00000004324RBMS19678.571ENSCJAG00000012871-9980.000Callithrix_jacchus
ENSLACG00000004324RBMS110069.759ENSCJAG00000022465-10076.738Callithrix_jacchus
ENSLACG00000004324RBMS110076.289ENSCJAG00000014861-9781.654Callithrix_jacchus
ENSLACG00000004324RBMS19978.729ENSCAFG00000009922RBMS110080.196Canis_familiaris
ENSLACG00000004324RBMS110075.258ENSCAFG00020006120RBMS110076.832Canis_lupus_dingo
ENSLACG00000004324RBMS110075.258ENSCHIG00000023380RBMS19580.206Capra_hircus
ENSLACG00000004324RBMS110075.945ENSTSYG00000005584RBMS110081.963Carlito_syrichta
ENSLACG00000004324RBMS19779.597ENSCPOG00000012310RBMS110078.250Cavia_porcellus
ENSLACG00000004324RBMS19581.654ENSCCAG00000033841RBMS19982.429Cebus_capucinus
ENSLACG00000004324RBMS19680.818ENSCATG00000043032RBMS110081.963Cercocebus_atys
ENSLACG00000004324RBMS19580.620ENSCLAG00000003031RBMS110078.517Chinchilla_lanigera
ENSLACG00000004324RBMS110075.945ENSCSAG00000015687RBMS19581.491Chlorocebus_sabaeus
ENSLACG00000004324RBMS19983.292ENSCPBG00000026455RBMS110084.029Chrysemys_picta_bellii
ENSLACG00000004324RBMS19680.818ENSCANG00000042152RBMS110081.963Colobus_angolensis_palliatus
ENSLACG00000004324RBMS110075.945ENSCGRG00001022833Rbms110076.832Cricetulus_griseus_chok1gshd
ENSLACG00000004324RBMS110075.945ENSCGRG00000008824Rbms110078.500Cricetulus_griseus_crigri
ENSLACG00000004324RBMS19974.505ENSCSEG00000010652RBMS110075.397Cynoglossus_semilaevis
ENSLACG00000004324RBMS19861.055ENSCSEG00000000889rbms1a9961.307Cynoglossus_semilaevis
ENSLACG00000004324RBMS19862.060ENSCVAG00000014698rbms1a9962.563Cyprinodon_variegatus
ENSLACG00000004324RBMS19974.690ENSCVAG00000002027RBMS110075.597Cyprinodon_variegatus
ENSLACG00000004324RBMS19973.020ENSDARG00000074023rbms1a9973.020Danio_rerio
ENSLACG00000004324RBMS110076.632ENSDNOG00000040691RBMS110079.540Dasypus_novemcinctus
ENSLACG00000004324RBMS19680.153ENSDORG00000007103Rbms110078.772Dipodomys_ordii
ENSLACG00000004324RBMS19571.503ENSETEG00000012135RBMS110072.280Echinops_telfairi
ENSLACG00000004324RBMS19681.425ENSEASG00005023132RBMS110080.685Equus_asinus_asinus
ENSLACG00000004324RBMS110076.632ENSECAG00000019894RBMS110077.305Equus_caballus
ENSLACG00000004324RBMS17479.012ENSEEUG00000005628RBMS17480.723Erinaceus_europaeus
ENSLACG00000004324RBMS19966.667ENSELUG00000018923rbms1a10068.865Esox_lucius
ENSLACG00000004324RBMS19974.828ENSELUG00000019328RBMS19371.466Esox_lucius
ENSLACG00000004324RBMS19579.692ENSFCAG00000012524RBMS110080.902Felis_catus
ENSLACG00000004324RBMS110079.038ENSFALG00000004440RBMS110084.881Ficedula_albicollis
ENSLACG00000004324RBMS19978.660ENSFDAG00000015692RBMS110078.250Fukomys_damarensis
ENSLACG00000004324RBMS19862.312ENSFHEG00000005662rbms1a9772.683Fundulus_heteroclitus
ENSLACG00000004324RBMS19973.449ENSFHEG00000000720RBMS110074.938Fundulus_heteroclitus
ENSLACG00000004324RBMS19356.458ENSGMOG00000000525rbms1a10062.363Gadus_morhua
ENSLACG00000004324RBMS19981.818ENSGALG00000011132RBMS110085.676Gallus_gallus
ENSLACG00000004324RBMS19855.944ENSGAFG00000011633rbms1a9963.978Gambusia_affinis
ENSLACG00000004324RBMS19972.953ENSGAFG00000007708RBMS110074.690Gambusia_affinis
ENSLACG00000004324RBMS19973.945ENSGACG00000005671RBMS110074.194Gasterosteus_aculeatus
ENSLACG00000004324RBMS19856.643ENSGACG00000015174rbms1a9564.857Gasterosteus_aculeatus
ENSLACG00000004324RBMS19984.029ENSGAGG00000007866RBMS110084.029Gopherus_agassizii
ENSLACG00000004324RBMS19680.769ENSGGOG00000001264RBMS110081.963Gorilla_gorilla
ENSLACG00000004324RBMS19679.082ENSGGOG00000043756-10078.240Gorilla_gorilla
ENSLACG00000004324RBMS19862.060ENSHBUG00000004802rbms1a9962.060Haplochromis_burtoni
ENSLACG00000004324RBMS19474.545ENSHBUG00000004516RBMS110076.045Haplochromis_burtoni
ENSLACG00000004324RBMS19978.164ENSHGLG00000010387RBMS110078.908Heterocephalus_glaber_female
ENSLACG00000004324RBMS19978.218ENSHGLG00100014105RBMS19978.960Heterocephalus_glaber_male
ENSLACG00000004324RBMS19861.307ENSHCOG00000020097rbms1a9961.558Hippocampus_comes
ENSLACG00000004324RBMS19970.471ENSHCOG00000016668RBMS110070.968Hippocampus_comes
ENSLACG00000004324RBMS19978.164ENSIPUG00000014677RBMS110078.164Ictalurus_punctatus
ENSLACG00000004324RBMS19973.697ENSIPUG00000010131RBMS19973.697Ictalurus_punctatus
ENSLACG00000004324RBMS19580.829ENSSTOG00000012501RBMS110078.000Ictidomys_tridecemlineatus
ENSLACG00000004324RBMS110075.258ENSJJAG00000016543Rbms110078.261Jaculus_jaculus
ENSLACG00000004324RBMS19861.055ENSKMAG00000011839-9961.307Kryptolebias_marmoratus
ENSLACG00000004324RBMS19977.419ENSKMAG00000013911RBMS110077.419Kryptolebias_marmoratus
ENSLACG00000004324RBMS19975.682ENSLBEG00000005787RBMS110076.427Labrus_bergylta
ENSLACG00000004324RBMS19861.809ENSLBEG00000025962rbms1a9962.060Labrus_bergylta
ENSLACG00000004324RBMS19981.638ENSLOCG00000008622rbms1a10082.630Lepisosteus_oculatus
ENSLACG00000004324RBMS19579.845ENSLAFG00000017217RBMS110080.620Loxodonta_africana
ENSLACG00000004324RBMS19581.395ENSMFAG00000000274RBMS110081.963Macaca_fascicularis
ENSLACG00000004324RBMS19581.347ENSMMUG00000016825RBMS19981.912Macaca_mulatta
ENSLACG00000004324RBMS19581.347ENSMNEG00000039425RBMS110081.963Macaca_nemestrina
ENSLACG00000004324RBMS19680.563ENSMLEG00000031517RBMS110081.698Mandrillus_leucophaeus
ENSLACG00000004324RBMS19976.179ENSMAMG00000003159-10075.434Mastacembelus_armatus
ENSLACG00000004324RBMS19860.050ENSMAMG00000005018rbms1a9960.302Mastacembelus_armatus
ENSLACG00000004324RBMS19862.060ENSMZEG00005005661rbms1a9962.060Maylandia_zebra
ENSLACG00000004324RBMS19467.766ENSMZEG00005007313RBMS19975.487Maylandia_zebra
ENSLACG00000004324RBMS110080.069ENSMGAG00000011054RBMS110085.843Meleagris_gallopavo
ENSLACG00000004324RBMS110076.289ENSMAUG00000008550Rbms110077.541Mesocricetus_auratus
ENSLACG00000004324RBMS19581.137ENSMICG00000008325RBMS110081.912Microcebus_murinus
ENSLACG00000004324RBMS110075.601ENSMOCG00000022617Rbms110078.517Microtus_ochrogaster
ENSLACG00000004324RBMS19975.186ENSMMOG00000003707RBMS110076.179Mola_mola
ENSLACG00000004324RBMS18663.610ENSMMOG00000018249rbms1a9163.897Mola_mola
ENSLACG00000004324RBMS110078.351ENSMODG00000005250RBMS19979.512Monodelphis_domestica
ENSLACG00000004324RBMS19475.000ENSMALG00000015715-10074.442Monopterus_albus
ENSLACG00000004324RBMS19861.307ENSMALG00000014235rbms1a9961.558Monopterus_albus
ENSLACG00000004324RBMS110074.227MGP_CAROLIEiJ_G0023586Rbms19978.036Mus_caroli
ENSLACG00000004324RBMS110074.570ENSMUSG00000026970Rbms19978.553Mus_musculus
ENSLACG00000004324RBMS19977.017MGP_PahariEiJ_G0025037Rbms19977.451Mus_pahari
ENSLACG00000004324RBMS110074.570MGP_SPRETEiJ_G0024508Rbms19978.295Mus_spretus
ENSLACG00000004324RBMS110075.258ENSMPUG00000000539RBMS19477.805Mustela_putorius_furo
ENSLACG00000004324RBMS110073.379ENSMLUG00000008762RBMS19576.427Myotis_lucifugus
ENSLACG00000004324RBMS110075.945ENSNGAG00000013636Rbms19580.720Nannospalax_galili
ENSLACG00000004324RBMS18663.068ENSNBRG00000020217rbms1a9563.068Neolamprologus_brichardi
ENSLACG00000004324RBMS110062.887ENSNBRG00000015151RBMS110071.088Neolamprologus_brichardi
ENSLACG00000004324RBMS19680.153ENSNLEG00000001667RBMS110081.963Nomascus_leucogenys
ENSLACG00000004324RBMS110065.979ENSMEUG00000000746RBMS110073.846Notamacropus_eugenii
ENSLACG00000004324RBMS19574.293ENSOPRG00000012431RBMS19575.064Ochotona_princeps
ENSLACG00000004324RBMS110075.601ENSODEG00000013934RBMS110078.517Octodon_degus
ENSLACG00000004324RBMS19862.563ENSONIG00000003329rbms1a9962.563Oreochromis_niloticus
ENSLACG00000004324RBMS19975.186ENSONIG00000008934RBMS110075.931Oreochromis_niloticus
ENSLACG00000004324RBMS110079.725ENSOANG00000006166RBMS19684.715Ornithorhynchus_anatinus
ENSLACG00000004324RBMS15357.613ENSOANG00000004477-9957.613Ornithorhynchus_anatinus
ENSLACG00000004324RBMS19580.103ENSOCUG00000017365RBMS18980.879Oryctolagus_cuniculus
ENSLACG00000004324RBMS19860.553ENSORLG00000003917rbms1a9960.804Oryzias_latipes
ENSLACG00000004324RBMS110069.927ENSORLG00000016818RBMS110070.660Oryzias_latipes
ENSLACG00000004324RBMS19860.902ENSORLG00020018663rbms1a9961.153Oryzias_latipes_hni
ENSLACG00000004324RBMS110069.682ENSORLG00020022335RBMS110070.416Oryzias_latipes_hni
ENSLACG00000004324RBMS110070.416ENSORLG00015018208RBMS110071.149Oryzias_latipes_hsok
ENSLACG00000004324RBMS19860.902ENSORLG00015016556rbms1a9961.153Oryzias_latipes_hsok
ENSLACG00000004324RBMS110071.324ENSOMEG00000002394RBMS110073.039Oryzias_melastigma
ENSLACG00000004324RBMS110075.085ENSOGAG00000002900RBMS110082.058Otolemur_garnettii
ENSLACG00000004324RBMS110074.744ENSOARG00000006870RBMS110078.117Ovis_aries
ENSLACG00000004324RBMS110072.165ENSPPAG00000036520-9979.474Pan_paniscus
ENSLACG00000004324RBMS19680.769ENSPPAG00000040083RBMS110082.171Pan_paniscus
ENSLACG00000004324RBMS19579.692ENSPPRG00000005040RBMS110080.902Panthera_pardus
ENSLACG00000004324RBMS19580.311ENSPTIG00000021240RBMS110080.902Panthera_tigris_altaica
ENSLACG00000004324RBMS19680.769ENSPTRG00000052304RBMS110082.171Pan_troglodytes
ENSLACG00000004324RBMS19578.811ENSPTRG00000039358-9979.587Pan_troglodytes
ENSLACG00000004324RBMS19581.395ENSPANG00000001383RBMS19981.912Papio_anubis
ENSLACG00000004324RBMS19977.970ENSPKIG00000001498rbms1a10077.970Paramormyrops_kingsleyae
ENSLACG00000004324RBMS19975.434ENSPKIG00000012818rbms1a10076.179Paramormyrops_kingsleyae
ENSLACG00000004324RBMS110078.351ENSPSIG00000010240RBMS19384.737Pelodiscus_sinensis
ENSLACG00000004324RBMS19858.543ENSPMGG00000004341rbms1a9959.045Periophthalmus_magnuspinnatus
ENSLACG00000004324RBMS110060.825ENSPMGG00000006310RBMS110068.435Periophthalmus_magnuspinnatus
ENSLACG00000004324RBMS19581.088ENSPEMG00000009449Rbms19781.865Peromyscus_maniculatus_bairdii
ENSLACG00000004324RBMS19981.174ENSPCIG00000018405RBMS110081.907Phascolarctos_cinereus
ENSLACG00000004324RBMS19862.563ENSPFOG00000016116rbms1a9962.814Poecilia_formosa
ENSLACG00000004324RBMS19974.938ENSPFOG00000017483RBMS110074.938Poecilia_formosa
ENSLACG00000004324RBMS19862.563ENSPLAG00000013864rbms1a9962.814Poecilia_latipinna
ENSLACG00000004324RBMS19973.201ENSPLAG00000000920RBMS110074.938Poecilia_latipinna
ENSLACG00000004324RBMS19862.563ENSPMEG00000016185rbms1a9962.814Poecilia_mexicana
ENSLACG00000004324RBMS19974.938ENSPMEG00000015838RBMS110074.938Poecilia_mexicana
ENSLACG00000004324RBMS19862.563ENSPREG00000020161rbms1a9962.814Poecilia_reticulata
ENSLACG00000004324RBMS19975.682ENSPREG00000008146RBMS110075.682Poecilia_reticulata
ENSLACG00000004324RBMS110076.976ENSPPYG00000012879-9478.803Pongo_abelii
ENSLACG00000004324RBMS19575.711ENSPCAG00000009673RBMS19576.093Procavia_capensis
ENSLACG00000004324RBMS110075.601ENSPCOG00000027294RBMS110081.698Propithecus_coquereli
ENSLACG00000004324RBMS19568.638ENSPVAG00000010429RBMS19569.409Pteropus_vampyrus
ENSLACG00000004324RBMS19974.194ENSPNYG00000002643RBMS110074.938Pundamilia_nyererei
ENSLACG00000004324RBMS19475.718ENSPNAG00000010225rbms1a9575.718Pygocentrus_nattereri
ENSLACG00000004324RBMS19978.164ENSPNAG00000023479RBMS110078.164Pygocentrus_nattereri
ENSLACG00000004324RBMS110074.570ENSRNOG00000008482Rbms19778.086Rattus_norvegicus
ENSLACG00000004324RBMS110076.976ENSRBIG00000044262RBMS110081.378Rhinopithecus_bieti
ENSLACG00000004324RBMS110076.976ENSRROG00000043108RBMS110081.586Rhinopithecus_roxellana
ENSLACG00000004324RBMS110077.320ENSSBOG00000034705RBMS110083.024Saimiri_boliviensis_boliviensis
ENSLACG00000004324RBMS110079.038ENSSHAG00000012271RBMS110080.058Sarcophilus_harrisii
ENSLACG00000004324RBMS19979.404ENSSFOG00015022929rbms110080.149Scleropages_formosus
ENSLACG00000004324RBMS110069.416ENSSFOG00015014493rbms1a10076.393Scleropages_formosus
ENSLACG00000004324RBMS19973.697ENSSMAG00000012152RBMS19476.751Scophthalmus_maximus
ENSLACG00000004324RBMS19854.895ENSSMAG00000012722rbms1a9963.172Scophthalmus_maximus
ENSLACG00000004324RBMS19862.814ENSSDUG00000020602rbms1a9964.247Seriola_dumerili
ENSLACG00000004324RBMS19976.427ENSSDUG00000018803RBMS110077.171Seriola_dumerili
ENSLACG00000004324RBMS19976.675ENSSLDG00000016556RBMS110077.419Seriola_lalandi_dorsalis
ENSLACG00000004324RBMS19862.814ENSSLDG00000009495rbms1a9963.065Seriola_lalandi_dorsalis
ENSLACG00000004324RBMS19556.589ENSSARG00000011085RBMS19457.364Sorex_araneus
ENSLACG00000004324RBMS110079.381ENSSPUG00000017163RBMS110085.942Sphenodon_punctatus
ENSLACG00000004324RBMS19977.171ENSSPAG00000000059RBMS110077.916Stegastes_partitus
ENSLACG00000004324RBMS19862.312ENSSPAG00000005371rbms1a9962.563Stegastes_partitus
ENSLACG00000004324RBMS110075.601ENSSSCG00000015888RBMS110079.462Sus_scrofa
ENSLACG00000004324RBMS110079.038ENSTGUG00000006606RBMS19980.244Taeniopygia_guttata
ENSLACG00000004324RBMS19973.267ENSTRUG00000005466-10073.267Takifugu_rubripes
ENSLACG00000004324RBMS19859.850ENSTRUG00000017155rbms1a9960.100Takifugu_rubripes
ENSLACG00000004324RBMS18762.429ENSTNIG00000009477rbms1a10061.890Tetraodon_nigroviridis
ENSLACG00000004324RBMS110068.729ENSTNIG00000016496RBMS19974.474Tetraodon_nigroviridis
ENSLACG00000004324RBMS19573.057ENSTBEG00000016156RBMS110073.834Tupaia_belangeri
ENSLACG00000004324RBMS19580.570ENSTTRG00000011058RBMS110081.347Tursiops_truncatus
ENSLACG00000004324RBMS19976.790ENSUAMG00000022331RBMS19977.531Ursus_americanus
ENSLACG00000004324RBMS19679.487ENSUMAG00000008605RBMS19980.256Ursus_maritimus
ENSLACG00000004324RBMS19379.058ENSVPAG00000002716RBMS19583.196Vicugna_pacos
ENSLACG00000004324RBMS110075.258ENSVVUG00000018682RBMS110081.432Vulpes_vulpes
ENSLACG00000004324RBMS110078.351ENSXETG00000016204rbms110077.778Xenopus_tropicalis
ENSLACG00000004324RBMS110067.698ENSXCOG00000000211RBMS110075.332Xiphophorus_couchianus
ENSLACG00000004324RBMS19859.799ENSXCOG00000001659rbms1a9960.050Xiphophorus_couchianus
ENSLACG00000004324RBMS19974.442ENSXMAG00000011405RBMS110074.442Xiphophorus_maculatus
ENSLACG00000004324RBMS19862.563ENSXMAG00000001802rbms1a9962.814Xiphophorus_maculatus

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