EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004343 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 2838 bases
Position: chrJH129700.1:119128-121965
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000004884	RVT_1	PF00078.27	1.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000004927	-	2241	-	ENSLACP00000004884	747 (aa)	-	H3A5G3

Gene Model

Click here to download ENSLACG00000004343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004343's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004343	-	83	32.834	ENSLACG00000011272	-	89	32.834
ENSLACG00000004343	-	68	32.000	ENSLACG00000018782	-	67	32.000
ENSLACG00000004343	-	83	63.050	ENSLACG00000018380	-	100	63.206
ENSLACG00000004343	-	76	38.339	ENSLACG00000016980	-	61	38.978
ENSLACG00000004343	-	57	31.343	ENSLACG00000011297	-	54	31.343
ENSLACG00000004343	-	64	42.086	ENSLACG00000002665	-	58	42.049
ENSLACG00000004343	-	51	34.800	ENSLACG00000009347	-	61	34.800
ENSLACG00000004343	-	75	36.159	ENSLACG00000002512	-	100	36.159
ENSLACG00000004343	-	81	62.980	ENSLACG00000008366	-	100	62.980
ENSLACG00000004343	-	90	35.549	ENSLACG00000009011	-	99	35.549
ENSLACG00000004343	-	55	31.878	ENSLACG00000010367	-	56	31.878
ENSLACG00000004343	-	92	36.667	ENSLACG00000005007	-	99	38.321
ENSLACG00000004343	-	64	38.318	ENSLACG00000015558	-	69	38.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004343	-	98	31.385	ENSATEG00000018698	-	65	31.385	Anabas_testudineus
ENSLACG00000004343	-	88	30.645	ENSATEG00000019692	-	57	30.645	Anabas_testudineus
ENSLACG00000004343	-	82	30.357	ENSATEG00000016298	-	60	30.357	Anabas_testudineus
ENSLACG00000004343	-	73	33.866	ENSACLG00000013947	-	51	33.866	Astatotilapia_calliptera
ENSLACG00000004343	-	92	30.028	ENSACLG00000001267	-	62	30.028	Astatotilapia_calliptera
ENSLACG00000004343	-	89	30.688	ENSAMXG00000033912	-	55	30.688	Astyanax_mexicanus
ENSLACG00000004343	-	77	33.136	ENSAMXG00000034382	-	51	33.136	Astyanax_mexicanus
ENSLACG00000004343	-	79	31.849	ENSAMXG00000041114	-	65	31.849	Astyanax_mexicanus
ENSLACG00000004343	-	92	30.312	ENSAMXG00000040885	-	54	30.312	Astyanax_mexicanus
ENSLACG00000004343	-	80	31.507	ENSAMXG00000033197	-	85	31.507	Astyanax_mexicanus
ENSLACG00000004343	-	86	30.688	ENSAMXG00000036113	-	58	30.688	Astyanax_mexicanus
ENSLACG00000004343	-	71	33.442	ENSAMXG00000035923	-	67	33.442	Astyanax_mexicanus
ENSLACG00000004343	-	68	33.559	ENSAMXG00000041896	-	73	33.559	Astyanax_mexicanus
ENSLACG00000004343	-	80	38.224	ENSCVAG00000020907	-	81	38.224	Cyprinodon_variegatus
ENSLACG00000004343	-	52	32.450	ENSGALG00000044734	-	64	32.450	Gallus_gallus
ENSLACG00000004343	-	71	32.317	ENSGAGG00000002613	-	72	32.317	Gopherus_agassizii
ENSLACG00000004343	-	57	31.835	ENSGAGG00000007552	-	64	31.835	Gopherus_agassizii
ENSLACG00000004343	-	79	35.606	ENSLOCG00000009957	-	70	35.606	Lepisosteus_oculatus
ENSLACG00000004343	-	78	30.868	ENSMAMG00000021634	-	85	30.868	Mastacembelus_armatus
ENSLACG00000004343	-	91	30.368	ENSMZEG00005012274	-	50	30.368	Maylandia_zebra
ENSLACG00000004343	-	82	30.159	ENSORLG00000029184	-	77	30.159	Oryzias_latipes
ENSLACG00000004343	-	69	32.039	ENSORLG00000024878	-	55	32.039	Oryzias_latipes
ENSLACG00000004343	-	75	31.469	ENSORLG00000025268	-	70	31.469	Oryzias_latipes
ENSLACG00000004343	-	81	31.317	ENSORLG00020015203	-	57	31.317	Oryzias_latipes_hni
ENSLACG00000004343	-	78	30.943	ENSORLG00020017608	-	55	30.943	Oryzias_latipes_hni
ENSLACG00000004343	-	87	32.335	ENSORLG00020007648	-	55	32.335	Oryzias_latipes_hni
ENSLACG00000004343	-	64	33.594	ENSORLG00020018561	-	51	33.594	Oryzias_latipes_hni
ENSLACG00000004343	-	75	33.231	ENSORLG00020016695	-	74	33.231	Oryzias_latipes_hni
ENSLACG00000004343	-	81	31.317	ENSORLG00015017494	-	50	31.317	Oryzias_latipes_hsok
ENSLACG00000004343	-	68	32.443	ENSORLG00015010510	-	77	32.443	Oryzias_latipes_hsok
ENSLACG00000004343	-	75	32.549	ENSORLG00015000379	-	75	32.549	Oryzias_latipes_hsok
ENSLACG00000004343	-	87	32.335	ENSORLG00015012565	-	60	32.335	Oryzias_latipes_hsok
ENSLACG00000004343	-	88	33.846	ENSORLG00015000130	-	58	33.846	Oryzias_latipes_hsok
ENSLACG00000004343	-	84	32.390	ENSOMEG00000012600	-	75	32.390	Oryzias_melastigma
ENSLACG00000004343	-	58	30.671	ENSPKIG00000012990	-	66	31.310	Paramormyrops_kingsleyae
ENSLACG00000004343	-	88	32.154	ENSPKIG00000013293	-	59	32.154	Paramormyrops_kingsleyae
ENSLACG00000004343	-	84	32.616	ENSPKIG00000006120	-	70	32.616	Paramormyrops_kingsleyae
ENSLACG00000004343	-	84	32.024	ENSPKIG00000007924	-	66	32.024	Paramormyrops_kingsleyae
ENSLACG00000004343	-	73	33.333	ENSPKIG00000020388	-	50	30.573	Paramormyrops_kingsleyae
ENSLACG00000004343	-	82	31.003	ENSPKIG00000020363	-	52	30.693	Paramormyrops_kingsleyae
ENSLACG00000004343	-	66	34.507	ENSPSIG00000001614	-	70	34.507	Pelodiscus_sinensis
ENSLACG00000004343	-	81	31.366	ENSPMEG00000023031	-	56	31.366	Poecilia_mexicana
ENSLACG00000004343	-	82	30.128	ENSPMEG00000008618	-	52	30.128	Poecilia_mexicana
ENSLACG00000004343	-	50	32.157	ENSPREG00000006650	-	68	32.157	Poecilia_reticulata
ENSLACG00000004343	-	76	32.245	ENSPREG00000006122	-	73	32.245	Poecilia_reticulata
ENSLACG00000004343	-	76	30.315	ENSPREG00000006496	-	78	30.315	Poecilia_reticulata
ENSLACG00000004343	-	93	32.209	ENSPREG00000005134	-	55	32.209	Poecilia_reticulata
ENSLACG00000004343	-	79	30.978	ENSPNAG00000021509	-	59	30.978	Pygocentrus_nattereri
ENSLACG00000004343	-	92	32.424	ENSSDUG00000010009	-	68	32.424	Seriola_dumerili
ENSLACG00000004343	-	78	30.682	ENSSDUG00000010222	-	57	30.682	Seriola_dumerili
ENSLACG00000004343	-	83	32.168	ENSXMAG00000021440	-	52	32.168	Xiphophorus_maculatus
ENSLACG00000004343	-	72	30.736	ENSXMAG00000029360	-	56	30.736	Xiphophorus_maculatus
ENSLACG00000004343	-	95	31.933	ENSXMAG00000021174	-	55	31.933	Xiphophorus_maculatus