EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLACG00000004456 (Gene tree)
Gene ID: -
Gene Symbol: SRFBP1
Alias: BUD22|FLJ25286|Rlb1|STRAP|p49
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 41192 bases
Position: chrJH128037.1:123836-165027
Accession: 26333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005014	BUD22	PF09073.10	2.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005058	SRFBP1-201	1206	-	ENSLACP00000005014	353 (aa)	-	H3A5U3

Gene Model

Click here to download ENSLACG00000004456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004456's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004456	SRFBP1	100	39.669	ENSG00000151304	SRFBP1	79	39.118	Homo_sapiens
ENSLACG00000004456	SRFBP1	100	35.714	ENSAMEG00000018050	SRFBP1	79	35.185	Ailuropoda_melanoleuca
ENSLACG00000004456	SRFBP1	100	32.861	ENSACIG00000019127	-	77	34.930	Amphilophus_citrinellus
ENSLACG00000004456	SRFBP1	100	36.658	ENSACAG00000003779	SRFBP1	79	36.164	Anolis_carolinensis
ENSLACG00000004456	SRFBP1	100	38.753	ENSANAG00000022485	SRFBP1	79	37.634	Aotus_nancymaae
ENSLACG00000004456	SRFBP1	100	36.034	ENSBTAG00000014320	SRFBP1	81	35.475	Bos_taurus
ENSLACG00000004456	SRFBP1	100	38.504	ENSCJAG00000017177	SRFBP1	82	38.187	Callithrix_jacchus
ENSLACG00000004456	SRFBP1	100	35.657	ENSCAFG00000000512	SRFBP1	80	35.121	Canis_familiaris
ENSLACG00000004456	SRFBP1	100	34.853	ENSCAFG00020009389	SRFBP1	79	35.121	Canis_lupus_dingo
ENSLACG00000004456	SRFBP1	100	37.047	ENSTSYG00000008630	-	80	37.360	Carlito_syrichta
ENSLACG00000004456	SRFBP1	99	34.078	ENSTSYG00000006869	-	89	33.799	Carlito_syrichta
ENSLACG00000004456	SRFBP1	100	35.674	ENSCPOG00000004695	SRFBP1	79	35.112	Cavia_porcellus
ENSLACG00000004456	SRFBP1	100	39.227	ENSCCAG00000032237	-	79	38.356	Cebus_capucinus
ENSLACG00000004456	SRFBP1	100	40.220	ENSCATG00000040904	SRFBP1	79	39.669	Cercocebus_atys
ENSLACG00000004456	SRFBP1	100	36.264	ENSCLAG00000003630	SRFBP1	79	35.989	Chinchilla_lanigera
ENSLACG00000004456	SRFBP1	100	39.227	ENSCSAG00000014636	SRFBP1	79	39.227	Chlorocebus_sabaeus
ENSLACG00000004456	SRFBP1	100	40.220	ENSCANG00000041298	SRFBP1	79	39.669	Colobus_angolensis_palliatus
ENSLACG00000004456	SRFBP1	50	42.135	ENSCGRG00001000718	Srfbp1	77	35.475	Cricetulus_griseus_chok1gshd
ENSLACG00000004456	SRFBP1	100	35.000	ENSCGRG00000010837	Srfbp1	82	35.475	Cricetulus_griseus_crigri
ENSLACG00000004456	SRFBP1	64	59.459	ENSCSEG00000011789	-	59	58.974	Cynoglossus_semilaevis
ENSLACG00000004456	SRFBP1	59	36.232	ENSCVAG00000013010	-	52	36.245	Cyprinodon_variegatus
ENSLACG00000004456	SRFBP1	100	36.612	ENSDNOG00000017733	SRFBP1	99	36.066	Dasypus_novemcinctus
ENSLACG00000004456	SRFBP1	100	36.212	ENSETEG00000012408	SRFBP1	100	34.865	Echinops_telfairi
ENSLACG00000004456	SRFBP1	100	37.363	ENSEASG00005012421	SRFBP1	87	36.813	Equus_asinus_asinus
ENSLACG00000004456	SRFBP1	100	36.667	ENSECAG00000015330	SRFBP1	79	36.111	Equus_caballus
ENSLACG00000004456	SRFBP1	100	34.349	ENSEEUG00000011514	SRFBP1	79	34.795	Erinaceus_europaeus
ENSLACG00000004456	SRFBP1	100	36.927	ENSFCAG00000035118	SRFBP1	79	36.658	Felis_catus
ENSLACG00000004456	SRFBP1	100	33.787	ENSFALG00000007595	SRFBP1	82	32.425	Ficedula_albicollis
ENSLACG00000004456	SRFBP1	100	36.438	ENSFDAG00000005102	SRFBP1	79	35.083	Fukomys_damarensis
ENSLACG00000004456	SRFBP1	100	33.882	ENSFHEG00000000477	-	56	71.053	Fundulus_heteroclitus
ENSLACG00000004456	SRFBP1	100	37.173	ENSGALG00000005316	SRFBP1	84	36.126	Gallus_gallus
ENSLACG00000004456	SRFBP1	100	38.874	ENSGAGG00000024915	SRFBP1	82	39.037	Gopherus_agassizii
ENSLACG00000004456	SRFBP1	100	38.950	ENSGGOG00000007725	SRFBP1	79	38.398	Gorilla_gorilla
ENSLACG00000004456	SRFBP1	62	53.846	ENSHCOG00000020644	-	55	78.788	Hippocampus_comes
ENSLACG00000004456	SRFBP1	100	36.134	ENSSTOG00000029184	SRFBP1	77	35.376	Ictidomys_tridecemlineatus
ENSLACG00000004456	SRFBP1	100	34.174	ENSJJAG00000013229	Srfbp1	81	34.174	Jaculus_jaculus
ENSLACG00000004456	SRFBP1	62	56.410	ENSLBEG00000013924	-	54	56.410	Labrus_bergylta
ENSLACG00000004456	SRFBP1	100	39.024	ENSLOCG00000008772	SRFBP1	80	38.400	Lepisosteus_oculatus
ENSLACG00000004456	SRFBP1	100	38.187	ENSLAFG00000015303	SRFBP1	77	37.396	Loxodonta_africana
ENSLACG00000004456	SRFBP1	100	39.945	ENSMFAG00000031263	SRFBP1	79	39.394	Macaca_fascicularis
ENSLACG00000004456	SRFBP1	100	39.945	ENSMMUG00000021009	SRFBP1	80	39.394	Macaca_mulatta
ENSLACG00000004456	SRFBP1	100	40.220	ENSMNEG00000040870	SRFBP1	79	39.669	Macaca_nemestrina
ENSLACG00000004456	SRFBP1	50	42.857	ENSMAUG00000009431	Srfbp1	78	35.792	Mesocricetus_auratus
ENSLACG00000004456	SRFBP1	100	36.785	ENSMICG00000042923	SRFBP1	79	36.842	Microcebus_murinus
ENSLACG00000004456	SRFBP1	100	35.598	ENSMODG00000013487	-	79	35.598	Monodelphis_domestica
ENSLACG00000004456	SRFBP1	99	31.765	ENSMALG00000001812	-	56	70.588	Monopterus_albus
ENSLACG00000004456	SRFBP1	100	36.438	MGP_CAROLIEiJ_G0022271	Srfbp1	77	36.164	Mus_caroli
ENSLACG00000004456	SRFBP1	100	35.040	ENSMUSG00000024528	Srfbp1	77	35.310	Mus_musculus
ENSLACG00000004456	SRFBP1	100	35.967	MGP_PahariEiJ_G0019004	Srfbp1	77	36.685	Mus_pahari
ENSLACG00000004456	SRFBP1	100	34.426	MGP_SPRETEiJ_G0023184	Srfbp1	77	34.426	Mus_spretus
ENSLACG00000004456	SRFBP1	100	39.247	ENSMPUG00000013031	SRFBP1	82	38.710	Mustela_putorius_furo
ENSLACG00000004456	SRFBP1	100	36.612	ENSMLUG00000009984	SRFBP1	79	35.519	Myotis_lucifugus
ENSLACG00000004456	SRFBP1	100	37.500	ENSNGAG00000013229	Srfbp1	78	38.333	Nannospalax_galili
ENSLACG00000004456	SRFBP1	55	40.196	ENSNBRG00000001146	-	78	34.153	Neolamprologus_brichardi
ENSLACG00000004456	SRFBP1	100	38.674	ENSNLEG00000011949	SRFBP1	79	39.118	Nomascus_leucogenys
ENSLACG00000004456	SRFBP1	62	55.263	ENSOPRG00000003881	-	59	55.263	Ochotona_princeps
ENSLACG00000004456	SRFBP1	100	34.890	ENSODEG00000007258	SRFBP1	82	34.615	Octodon_degus
ENSLACG00000004456	SRFBP1	100	36.216	ENSOANG00000010042	-	91	35.422	Ornithorhynchus_anatinus
ENSLACG00000004456	SRFBP1	100	34.805	ENSOCUG00000009556	SRFBP1	79	34.026	Oryctolagus_cuniculus
ENSLACG00000004456	SRFBP1	99	31.106	ENSORLG00020020129	-	53	31.392	Oryzias_latipes_hni
ENSLACG00000004456	SRFBP1	99	31.768	ENSORLG00015000238	-	76	32.203	Oryzias_latipes_hsok
ENSLACG00000004456	SRFBP1	100	37.396	ENSOGAG00000032423	SRFBP1	79	36.842	Otolemur_garnettii
ENSLACG00000004456	SRFBP1	100	38.781	ENSPPAG00000035848	SRFBP1	79	38.227	Pan_paniscus
ENSLACG00000004456	SRFBP1	100	37.466	ENSPPRG00000001695	SRFBP1	79	36.927	Panthera_pardus
ENSLACG00000004456	SRFBP1	100	37.197	ENSPTIG00000012305	SRFBP1	79	36.658	Panthera_tigris_altaica
ENSLACG00000004456	SRFBP1	100	37.535	ENSPTRG00000017172	SRFBP1	79	36.915	Pan_troglodytes
ENSLACG00000004456	SRFBP1	100	39.669	ENSPANG00000003799	SRFBP1	79	39.118	Papio_anubis
ENSLACG00000004456	SRFBP1	86	75.000	ENSPKIG00000024291	-	62	75.000	Paramormyrops_kingsleyae
ENSLACG00000004456	SRFBP1	100	36.986	ENSPSIG00000010650	SRFBP1	80	36.740	Pelodiscus_sinensis
ENSLACG00000004456	SRFBP1	100	35.616	ENSPFOG00000005272	-	69	34.521	Poecilia_formosa
ENSLACG00000004456	SRFBP1	99	34.831	ENSPREG00000017248	-	77	34.078	Poecilia_reticulata
ENSLACG00000004456	SRFBP1	100	38.172	ENSPPYG00000015714	SRFBP1	79	38.441	Pongo_abelii
ENSLACG00000004456	SRFBP1	100	37.535	ENSPCOG00000027331	SRFBP1	79	36.975	Propithecus_coquereli
ENSLACG00000004456	SRFBP1	53	40.201	ENSPNYG00000010355	-	77	31.662	Pundamilia_nyererei
ENSLACG00000004456	SRFBP1	100	37.432	ENSRNOG00000014808	Srfbp1	77	36.885	Rattus_norvegicus
ENSLACG00000004456	SRFBP1	100	39.178	ENSRBIG00000031064	SRFBP1	80	39.178	Rhinopithecus_bieti
ENSLACG00000004456	SRFBP1	100	40.110	ENSRROG00000026932	SRFBP1	79	40.110	Rhinopithecus_roxellana
ENSLACG00000004456	SRFBP1	100	40.162	ENSSBOG00000015464	-	79	39.037	Saimiri_boliviensis_boliviensis
ENSLACG00000004456	SRFBP1	100	35.659	ENSSHAG00000016003	SRFBP1	79	35.219	Sarcophilus_harrisii
ENSLACG00000004456	SRFBP1	88	71.053	ENSSDUG00000001828	-	54	76.471	Seriola_dumerili
ENSLACG00000004456	SRFBP1	100	36.785	ENSSARG00000010669	SRFBP1	79	36.119	Sorex_araneus
ENSLACG00000004456	SRFBP1	100	38.268	ENSSPUG00000009204	SRFBP1	80	37.709	Sphenodon_punctatus
ENSLACG00000004456	SRFBP1	76	31.596	ENSSPAG00000010728	-	53	78.788	Stegastes_partitus
ENSLACG00000004456	SRFBP1	100	37.255	ENSSSCG00000022656	SRFBP1	87	36.695	Sus_scrofa
ENSLACG00000004456	SRFBP1	51	42.703	ENSTGUG00000001151	-	75	41.848	Taeniopygia_guttata
ENSLACG00000004456	SRFBP1	100	33.962	ENSTNIG00000009267	-	77	35.475	Tetraodon_nigroviridis
ENSLACG00000004456	SRFBP1	100	36.483	ENSUAMG00000016707	SRFBP1	82	35.958	Ursus_americanus
ENSLACG00000004456	SRFBP1	100	35.054	ENSUMAG00000018340	SRFBP1	79	34.254	Ursus_maritimus
ENSLACG00000004456	SRFBP1	100	36.158	ENSVPAG00000005714	SRFBP1	79	35.933	Vicugna_pacos
ENSLACG00000004456	SRFBP1	100	36.490	ENSVVUG00000019178	SRFBP1	82	35.933	Vulpes_vulpes
ENSLACG00000004456	SRFBP1	100	35.967	ENSXETG00000004681	srfbp1	78	35.734	Xenopus_tropicalis
ENSLACG00000004456	SRFBP1	86	69.444	ENSXMAG00000026251	-	55	71.053	Xiphophorus_maculatus