EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004528 (Gene tree)
Gene ID: 102360260
Gene Symbol: HBS1L
Alias: DKFZp434g247|EF-1a|ERFS|HBS1|HSPC276|KIAA1038|eRF3c
Full Name: HBS1-like protein
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 64135 bases
Position: chrJH128535.1:126541-190675
Accession: 102360260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005092	GTP_EFTU	PF00009.27	3.3e-48	1	1
ENSLACP00000005092	MMR_HSR1	PF01926.23	3.4e-07	1	1
ENSLACP00000005092	GTP_EFTU_D2	PF03144.25	6.5e-08	1	1
ENSLACP00000005092	GTP_EFTU_D3	PF03143.17	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005138	HBS1L-201	1473	XM_006009198	ENSLACP00000005092	490 (aa)	-	H3A621

Gene Model

Click here to download ENSLACG00000004528's gene model file

Pathways

Pathway ID	Pathway Name	Source
lcm03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004528	HBS1L	76	41.753	ENSLACG00000015342	eef1a1l1	82	41.753
ENSLACG00000004528	HBS1L	76	41.645	ENSLACG00000002952	-	84	41.645
ENSLACG00000004528	HBS1L	79	32.581	ENSLACG00000004296	EEF1A2	85	32.581
ENSLACG00000004528	HBS1L	68	30.678	ENSLACG00000008242	TUFM	68	30.678
ENSLACG00000004528	HBS1L	77	31.510	ENSLACG00000001700	GSPT1	72	31.510
ENSLACG00000004528	HBS1L	68	39.942	ENSLACG00000015392	-	83	39.942
ENSLACG00000004528	HBS1L	77	40.052	ENSLACG00000003948	si:dkey-37o8.1	84	40.052

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004528	HBS1L	100	79.150	ENSG00000112339	HBS1L	100	79.098	Homo_sapiens
ENSLACG00000004528	HBS1L	76	86.327	ENSAPOG00000013169	hbs1l	63	86.327	Acanthochromis_polyacanthus
ENSLACG00000004528	HBS1L	99	79.435	ENSAMEG00000009749	HBS1L	72	79.435	Ailuropoda_melanoleuca
ENSLACG00000004528	HBS1L	99	78.049	ENSACIG00000017087	hbs1l	82	78.049	Amphilophus_citrinellus
ENSLACG00000004528	HBS1L	99	78.571	ENSAPEG00000008320	hbs1l	70	78.571	Amphiprion_percula
ENSLACG00000004528	HBS1L	99	79.184	ENSATEG00000004459	hbs1l	69	79.184	Anabas_testudineus
ENSLACG00000004528	HBS1L	99	80.816	ENSAPLG00000007791	HBS1L	72	80.816	Anas_platyrhynchos
ENSLACG00000004528	HBS1L	99	80.244	ENSACAG00000010120	HBS1L	71	80.244	Anolis_carolinensis
ENSLACG00000004528	HBS1L	100	79.394	ENSANAG00000038076	HBS1L	79	79.394	Aotus_nancymaae
ENSLACG00000004528	HBS1L	99	78.367	ENSACLG00000010469	hbs1l	69	78.367	Astatotilapia_calliptera
ENSLACG00000004528	HBS1L	100	79.150	ENSAMXG00000004260	hbs1l	82	79.150	Astyanax_mexicanus
ENSLACG00000004528	HBS1L	95	80.556	ENSBTAG00000020174	HBS1L	72	79.065	Bos_taurus
ENSLACG00000004528	HBS1L	78	49.482	WBGene00010622	K07A12.4	64	49.482	Caenorhabditis_elegans
ENSLACG00000004528	HBS1L	100	79.192	ENSCJAG00000007678	HBS1L	79	79.192	Callithrix_jacchus
ENSLACG00000004528	HBS1L	98	79.261	ENSCAFG00000000226	HBS1L	72	79.310	Canis_familiaris
ENSLACG00000004528	HBS1L	98	79.261	ENSCAFG00020021904	HBS1L	72	79.310	Canis_lupus_dingo
ENSLACG00000004528	HBS1L	98	79.261	ENSCHIG00000010299	HBS1L	74	79.310	Capra_hircus
ENSLACG00000004528	HBS1L	99	79.065	ENSTSYG00000007089	HBS1L	79	79.065	Carlito_syrichta
ENSLACG00000004528	HBS1L	95	67.024	ENSCPOG00000007015	HBS1L	70	66.395	Cavia_porcellus
ENSLACG00000004528	HBS1L	100	78.384	ENSCCAG00000033863	HBS1L	82	78.659	Cebus_capucinus
ENSLACG00000004528	HBS1L	100	79.352	ENSCATG00000043042	HBS1L	78	79.352	Cercocebus_atys
ENSLACG00000004528	HBS1L	95	80.983	ENSCLAG00000004937	HBS1L	72	79.472	Chinchilla_lanigera
ENSLACG00000004528	HBS1L	99	79.430	ENSCSAG00000016791	HBS1L	72	79.430	Chlorocebus_sabaeus
ENSLACG00000004528	HBS1L	92	66.228	ENSCHOG00000001852	HBS1L	69	66.228	Choloepus_hoffmanni
ENSLACG00000004528	HBS1L	99	80.894	ENSCPBG00000017635	HBS1L	71	80.894	Chrysemys_picta_bellii
ENSLACG00000004528	HBS1L	85	60.233	ENSCING00000005592	-	60	60.233	Ciona_intestinalis
ENSLACG00000004528	HBS1L	82	59.057	ENSCSAVG00000002297	-	65	59.057	Ciona_savignyi
ENSLACG00000004528	HBS1L	100	78.947	ENSCANG00000031208	HBS1L	78	78.947	Colobus_angolensis_palliatus
ENSLACG00000004528	HBS1L	98	79.877	ENSCGRG00001024531	Hbs1l	72	79.919	Cricetulus_griseus_chok1gshd
ENSLACG00000004528	HBS1L	98	79.877	ENSCGRG00000017361	Hbs1l	72	79.919	Cricetulus_griseus_crigri
ENSLACG00000004528	HBS1L	99	78.367	ENSCSEG00000002794	hbs1l	71	79.253	Cynoglossus_semilaevis
ENSLACG00000004528	HBS1L	99	77.551	ENSCVAG00000001462	hbs1l	69	77.551	Cyprinodon_variegatus
ENSLACG00000004528	HBS1L	99	78.776	ENSDARG00000036778	hbs1l	72	78.776	Danio_rerio
ENSLACG00000004528	HBS1L	99	79.472	ENSDORG00000005958	Hbs1l	72	79.472	Dipodomys_ordii
ENSLACG00000004528	HBS1L	78	58.115	FBgn0042712	HBS1	57	58.115	Drosophila_melanogaster
ENSLACG00000004528	HBS1L	98	73.045	ENSETEG00000000913	HBS1L	72	73.171	Echinops_telfairi
ENSLACG00000004528	HBS1L	96	69.620	ENSEBUG00000010759	hbs1l	80	69.620	Eptatretus_burgeri
ENSLACG00000004528	HBS1L	98	79.261	ENSEASG00005011148	HBS1L	74	79.310	Equus_asinus_asinus
ENSLACG00000004528	HBS1L	98	79.184	ENSECAG00000004470	HBS1L	76	79.234	Equus_caballus
ENSLACG00000004528	HBS1L	96	80.585	ENSEEUG00000013582	HBS1L	71	80.619	Erinaceus_europaeus
ENSLACG00000004528	HBS1L	97	71.279	ENSELUG00000006444	hbs1l	80	71.279	Esox_lucius
ENSLACG00000004528	HBS1L	98	79.630	ENSFCAG00000001810	HBS1L	90	81.316	Felis_catus
ENSLACG00000004528	HBS1L	99	81.633	ENSFALG00000011898	HBS1L	82	81.633	Ficedula_albicollis
ENSLACG00000004528	HBS1L	95	81.838	ENSFDAG00000011841	HBS1L	72	80.285	Fukomys_damarensis
ENSLACG00000004528	HBS1L	99	76.844	ENSFHEG00000006942	hbs1l	75	76.844	Fundulus_heteroclitus
ENSLACG00000004528	HBS1L	98	77.433	ENSGMOG00000011843	hbs1l	71	77.433	Gadus_morhua
ENSLACG00000004528	HBS1L	99	80.816	ENSGALG00000013962	HBS1L	76	80.816	Gallus_gallus
ENSLACG00000004528	HBS1L	99	77.551	ENSGAFG00000004157	hbs1l	69	77.551	Gambusia_affinis
ENSLACG00000004528	HBS1L	99	78.615	ENSGACG00000011035	hbs1l	74	78.615	Gasterosteus_aculeatus
ENSLACG00000004528	HBS1L	99	80.894	ENSGAGG00000002033	HBS1L	71	80.894	Gopherus_agassizii
ENSLACG00000004528	HBS1L	99	74.542	ENSGGOG00000034956	-	88	74.542	Gorilla_gorilla
ENSLACG00000004528	HBS1L	99	78.776	ENSHBUG00000013424	hbs1l	69	78.776	Haplochromis_burtoni
ENSLACG00000004528	HBS1L	98	78.969	ENSHGLG00000000516	HBS1L	72	79.022	Heterocephalus_glaber_female
ENSLACG00000004528	HBS1L	98	78.969	ENSHGLG00100003550	HBS1L	72	79.022	Heterocephalus_glaber_male
ENSLACG00000004528	HBS1L	99	76.829	ENSHCOG00000007581	hbs1l	66	76.829	Hippocampus_comes
ENSLACG00000004528	HBS1L	99	80.041	ENSIPUG00000010748	hbs1l	72	80.041	Ictalurus_punctatus
ENSLACG00000004528	HBS1L	99	78.279	ENSSTOG00000007551	HBS1L	77	78.340	Ictidomys_tridecemlineatus
ENSLACG00000004528	HBS1L	99	78.689	ENSJJAG00000017024	-	72	78.745	Jaculus_jaculus
ENSLACG00000004528	HBS1L	95	64.482	ENSJJAG00000012660	-	70	63.692	Jaculus_jaculus
ENSLACG00000004528	HBS1L	99	78.279	ENSKMAG00000012130	hbs1l	78	76.970	Kryptolebias_marmoratus
ENSLACG00000004528	HBS1L	99	79.346	ENSLBEG00000002784	hbs1l	79	79.346	Labrus_bergylta
ENSLACG00000004528	HBS1L	99	82.041	ENSLOCG00000016221	hbs1l	69	81.874	Lepisosteus_oculatus
ENSLACG00000004528	HBS1L	99	77.439	ENSLAFG00000007835	HBS1L	72	77.439	Loxodonta_africana
ENSLACG00000004528	HBS1L	100	79.352	ENSMFAG00000003766	HBS1L	80	79.352	Macaca_fascicularis
ENSLACG00000004528	HBS1L	100	79.150	ENSMMUG00000004802	HBS1L	88	79.430	Macaca_mulatta
ENSLACG00000004528	HBS1L	100	79.352	ENSMNEG00000043942	HBS1L	80	79.352	Macaca_nemestrina
ENSLACG00000004528	HBS1L	100	79.150	ENSMLEG00000043218	HBS1L	78	79.150	Mandrillus_leucophaeus
ENSLACG00000004528	HBS1L	99	79.261	ENSMAMG00000016498	hbs1l	77	79.261	Mastacembelus_armatus
ENSLACG00000004528	HBS1L	99	78.163	ENSMZEG00005024018	-	82	77.890	Maylandia_zebra
ENSLACG00000004528	HBS1L	99	78.367	ENSMZEG00005015575	hbs1l	69	78.367	Maylandia_zebra
ENSLACG00000004528	HBS1L	99	80.408	ENSMGAG00000013065	HBS1L	71	80.408	Meleagris_gallopavo
ENSLACG00000004528	HBS1L	98	80.453	ENSMAUG00000001077	Hbs1l	72	80.488	Mesocricetus_auratus
ENSLACG00000004528	HBS1L	98	77.778	ENSMICG00000001533	-	82	77.846	Microcebus_murinus
ENSLACG00000004528	HBS1L	98	68.313	ENSMICG00000030043	-	70	81.481	Microcebus_murinus
ENSLACG00000004528	HBS1L	98	80.287	ENSMOCG00000023038	Hbs1l	72	80.325	Microtus_ochrogaster
ENSLACG00000004528	HBS1L	99	78.905	ENSMMOG00000015507	hbs1l	74	78.323	Mola_mola
ENSLACG00000004528	HBS1L	99	79.472	ENSMODG00000017499	HBS1L	72	79.472	Monodelphis_domestica
ENSLACG00000004528	HBS1L	99	78.571	ENSMALG00000010768	hbs1l	79	78.571	Monopterus_albus
ENSLACG00000004528	HBS1L	98	78.439	MGP_CAROLIEiJ_G0015162	Hbs1l	72	78.499	Mus_caroli
ENSLACG00000004528	HBS1L	98	78.439	ENSMUSG00000019977	Hbs1l	85	84.058	Mus_musculus
ENSLACG00000004528	HBS1L	98	77.823	MGP_PahariEiJ_G0023782	Hbs1l	72	77.890	Mus_pahari
ENSLACG00000004528	HBS1L	98	78.439	MGP_SPRETEiJ_G0015970	Hbs1l	72	78.499	Mus_spretus
ENSLACG00000004528	HBS1L	98	79.218	ENSMPUG00000014810	HBS1L	72	79.268	Mustela_putorius_furo
ENSLACG00000004528	HBS1L	98	78.601	ENSMLUG00000010618	HBS1L	72	78.659	Myotis_lucifugus
ENSLACG00000004528	HBS1L	98	79.466	ENSNGAG00000015184	Hbs1l	72	79.513	Nannospalax_galili
ENSLACG00000004528	HBS1L	99	78.732	ENSNBRG00000020095	hbs1l	78	78.732	Neolamprologus_brichardi
ENSLACG00000004528	HBS1L	100	78.947	ENSNLEG00000014721	HBS1L	79	78.947	Nomascus_leucogenys
ENSLACG00000004528	HBS1L	84	82.741	ENSMEUG00000003907	HBS1L	61	82.741	Notamacropus_eugenii
ENSLACG00000004528	HBS1L	80	80.000	ENSOPRG00000013595	HBS1L	56	80.000	Ochotona_princeps
ENSLACG00000004528	HBS1L	95	81.624	ENSODEG00000008959	HBS1L	73	80.081	Octodon_degus
ENSLACG00000004528	HBS1L	99	78.367	ENSONIG00000000460	hbs1l	68	78.208	Oreochromis_niloticus
ENSLACG00000004528	HBS1L	98	79.296	ENSOANG00000002684	-	71	79.346	Ornithorhynchus_anatinus
ENSLACG00000004528	HBS1L	99	74.180	ENSOCUG00000011619	HBS1L	76	77.729	Oryctolagus_cuniculus
ENSLACG00000004528	HBS1L	99	75.714	ENSORLG00000016559	hbs1l	69	75.714	Oryzias_latipes
ENSLACG00000004528	HBS1L	99	75.714	ENSORLG00020003827	hbs1l	69	75.714	Oryzias_latipes_hni
ENSLACG00000004528	HBS1L	99	75.510	ENSORLG00015023105	hbs1l	69	75.510	Oryzias_latipes_hsok
ENSLACG00000004528	HBS1L	99	77.597	ENSOMEG00000016715	hbs1l	69	77.597	Oryzias_melastigma
ENSLACG00000004528	HBS1L	98	80.619	ENSOGAG00000012604	HBS1L	72	80.652	Otolemur_garnettii
ENSLACG00000004528	HBS1L	95	80.128	ENSOARG00000014798	-	72	78.659	Ovis_aries
ENSLACG00000004528	HBS1L	95	79.915	ENSOARG00000005671	-	72	78.455	Ovis_aries
ENSLACG00000004528	HBS1L	100	79.555	ENSPPAG00000029900	HBS1L	78	79.555	Pan_paniscus
ENSLACG00000004528	HBS1L	98	79.835	ENSPPRG00000005285	HBS1L	79	79.878	Panthera_pardus
ENSLACG00000004528	HBS1L	98	79.835	ENSPTIG00000015803	HBS1L	79	79.878	Panthera_tigris_altaica
ENSLACG00000004528	HBS1L	100	79.555	ENSPTRG00000018630	HBS1L	78	79.555	Pan_troglodytes
ENSLACG00000004528	HBS1L	100	79.352	ENSPANG00000007075	HBS1L	78	79.352	Papio_anubis
ENSLACG00000004528	HBS1L	99	79.388	ENSPKIG00000023171	hbs1l	75	79.710	Paramormyrops_kingsleyae
ENSLACG00000004528	HBS1L	93	79.826	ENSPSIG00000016467	HBS1L	75	79.826	Pelodiscus_sinensis
ENSLACG00000004528	HBS1L	99	76.735	ENSPMGG00000018051	hbs1l	71	85.612	Periophthalmus_magnuspinnatus
ENSLACG00000004528	HBS1L	98	78.850	ENSPEMG00000014369	Hbs1l	72	78.905	Peromyscus_maniculatus_bairdii
ENSLACG00000004528	HBS1L	98	70.722	ENSPMAG00000002516	hbs1l	70	70.722	Petromyzon_marinus
ENSLACG00000004528	HBS1L	99	77.347	ENSPFOG00000021764	hbs1l	69	77.347	Poecilia_formosa
ENSLACG00000004528	HBS1L	99	77.143	ENSPLAG00000006193	hbs1l	69	77.143	Poecilia_latipinna
ENSLACG00000004528	HBS1L	99	77.551	ENSPMEG00000000925	hbs1l	68	79.111	Poecilia_mexicana
ENSLACG00000004528	HBS1L	99	76.687	ENSPREG00000011270	hbs1l	69	76.531	Poecilia_reticulata
ENSLACG00000004528	HBS1L	99	79.226	ENSPPYG00000017027	HBS1L	72	79.226	Pongo_abelii
ENSLACG00000004528	HBS1L	98	78.763	ENSPCAG00000007002	HBS1L	71	78.819	Procavia_capensis
ENSLACG00000004528	HBS1L	96	78.013	ENSPVAG00000015229	HBS1L	73	76.735	Pteropus_vampyrus
ENSLACG00000004528	HBS1L	99	78.367	ENSPNYG00000013360	hbs1l	69	78.367	Pundamilia_nyererei
ENSLACG00000004528	HBS1L	99	79.184	ENSPNAG00000026721	hbs1l	73	80.417	Pygocentrus_nattereri
ENSLACG00000004528	HBS1L	96	80.252	ENSRNOG00000014531	Hbs1l	71	80.290	Rattus_norvegicus
ENSLACG00000004528	HBS1L	99	79.633	ENSRBIG00000004484	HBS1L	77	76.398	Rhinopithecus_bieti
ENSLACG00000004528	HBS1L	100	79.352	ENSRROG00000026176	HBS1L	78	79.352	Rhinopithecus_roxellana
ENSLACG00000004528	HBS1L	76	37.887	YKR084C	-	64	37.887	Saccharomyces_cerevisiae
ENSLACG00000004528	HBS1L	99	70.935	ENSSBOG00000016930	-	73	81.022	Saimiri_boliviensis_boliviensis
ENSLACG00000004528	HBS1L	100	79.394	ENSSBOG00000019696	-	79	79.394	Saimiri_boliviensis_boliviensis
ENSLACG00000004528	HBS1L	98	79.877	ENSSHAG00000013509	HBS1L	72	79.919	Sarcophilus_harrisii
ENSLACG00000004528	HBS1L	99	78.367	ENSSFOG00015017544	hbs1l	68	77.959	Scleropages_formosus
ENSLACG00000004528	HBS1L	99	77.755	ENSSMAG00000010621	hbs1l	69	77.755	Scophthalmus_maximus
ENSLACG00000004528	HBS1L	99	78.571	ENSSDUG00000012974	hbs1l	69	78.571	Seriola_dumerili
ENSLACG00000004528	HBS1L	99	78.776	ENSSLDG00000004960	hbs1l	78	78.776	Seriola_lalandi_dorsalis
ENSLACG00000004528	HBS1L	97	80.294	ENSSARG00000006747	HBS1L	72	80.331	Sorex_araneus
ENSLACG00000004528	HBS1L	98	81.031	ENSSPUG00000012389	HBS1L	71	81.059	Sphenodon_punctatus
ENSLACG00000004528	HBS1L	99	80.285	ENSSSCG00000004169	HBS1L	77	80.285	Sus_scrofa
ENSLACG00000004528	HBS1L	99	81.224	ENSTGUG00000011507	HBS1L	71	81.224	Taeniopygia_guttata
ENSLACG00000004528	HBS1L	98	78.261	ENSTRUG00000016128	hbs1l	82	77.333	Takifugu_rubripes
ENSLACG00000004528	HBS1L	98	78.261	ENSTNIG00000016320	hbs1l	70	78.261	Tetraodon_nigroviridis
ENSLACG00000004528	HBS1L	98	75.620	ENSTBEG00000009950	HBS1L	72	75.714	Tupaia_belangeri
ENSLACG00000004528	HBS1L	98	78.807	ENSTTRG00000003715	HBS1L	72	78.862	Tursiops_truncatus
ENSLACG00000004528	HBS1L	99	79.435	ENSUAMG00000001064	HBS1L	72	79.435	Ursus_americanus
ENSLACG00000004528	HBS1L	99	79.234	ENSUMAG00000024395	HBS1L	85	79.234	Ursus_maritimus
ENSLACG00000004528	HBS1L	98	79.794	ENSVPAG00000006280	HBS1L	71	79.837	Vicugna_pacos
ENSLACG00000004528	HBS1L	98	79.261	ENSVVUG00000000295	HBS1L	72	79.310	Vulpes_vulpes
ENSLACG00000004528	HBS1L	99	78.367	ENSXETG00000003726	hbs1l	71	78.367	Xenopus_tropicalis
ENSLACG00000004528	HBS1L	99	77.189	ENSXCOG00000005323	hbs1l	72	77.189	Xiphophorus_couchianus
ENSLACG00000004528	HBS1L	99	77.551	ENSXMAG00000004359	hbs1l	69	77.551	Xiphophorus_maculatus