EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004602 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Plus strand
Length: 36829 bases
Position: chrJH129205.1:129842-166670
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005181	RRM_1	PF00076.22	8.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005227	-	2640	-	ENSLACP00000005181	558 (aa)	-	H3A6B0

Gene Model

Click here to download ENSLACG00000004602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004602	-	72	36.700	ENSLACG00000009001	zgc:123010	64	38.602

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004602	-	72	35.280	ENSAPOG00000019633	zgc:123010	92	32.090	Acanthochromis_polyacanthus
ENSLACG00000004602	-	63	37.221	ENSAPOG00000022403	-	75	35.248	Acanthochromis_polyacanthus
ENSLACG00000004602	-	92	31.250	ENSAPOG00000005058	si:dkey-33c12.4	88	30.470	Acanthochromis_polyacanthus
ENSLACG00000004602	-	62	31.624	ENSAPOG00000001034	-	55	35.036	Acanthochromis_polyacanthus
ENSLACG00000004602	-	72	35.644	ENSACIG00000021684	zgc:123010	73	37.576	Amphilophus_citrinellus
ENSLACG00000004602	-	92	30.836	ENSAOCG00000020066	si:dkey-33c12.4	85	30.313	Amphiprion_ocellaris
ENSLACG00000004602	-	72	35.523	ENSAOCG00000005910	zgc:123010	92	31.530	Amphiprion_ocellaris
ENSLACG00000004602	-	63	36.049	ENSAOCG00000000431	-	75	35.812	Amphiprion_ocellaris
ENSLACG00000004602	-	72	35.280	ENSAPEG00000014305	zgc:123010	97	30.524	Amphiprion_percula
ENSLACG00000004602	-	53	47.660	ENSAPEG00000023603	-	61	42.241	Amphiprion_percula
ENSLACG00000004602	-	73	32.766	ENSATEG00000018885	si:dkey-33c12.4	88	31.453	Anabas_testudineus
ENSLACG00000004602	-	53	50.698	ENSATEG00000018302	-	80	35.593	Anabas_testudineus
ENSLACG00000004602	-	72	36.077	ENSATEG00000001220	zgc:123010	92	31.343	Anabas_testudineus
ENSLACG00000004602	-	57	45.789	ENSACLG00000014192	si:dkey-33c12.4	92	30.757	Astatotilapia_calliptera
ENSLACG00000004602	-	74	34.679	ENSACLG00000010188	zgc:123010	92	30.871	Astatotilapia_calliptera
ENSLACG00000004602	-	72	33.412	ENSACLG00000012346	-	91	30.000	Astatotilapia_calliptera
ENSLACG00000004602	-	51	53.704	ENSACLG00000003019	-	75	39.066	Astatotilapia_calliptera
ENSLACG00000004602	-	72	36.049	ENSAMXG00000041967	zgc:123010	55	38.369	Astyanax_mexicanus
ENSLACG00000004602	-	94	39.818	ENSAMXG00000010871	si:dkey-33c12.4	89	37.997	Astyanax_mexicanus
ENSLACG00000004602	-	92	40.761	ENSCPBG00000024454	-	87	39.520	Chrysemys_picta_bellii
ENSLACG00000004602	-	70	42.560	ENSCSEG00000002755	-	86	34.933	Cynoglossus_semilaevis
ENSLACG00000004602	-	56	35.806	ENSCSEG00000006468	zgc:123010	59	30.769	Cynoglossus_semilaevis
ENSLACG00000004602	-	64	38.404	ENSCVAG00000004187	-	81	35.897	Cyprinodon_variegatus
ENSLACG00000004602	-	72	34.307	ENSCVAG00000013288	zgc:123010	90	31.478	Cyprinodon_variegatus
ENSLACG00000004602	-	60	35.227	ENSCVAG00000006564	-	87	30.221	Cyprinodon_variegatus
ENSLACG00000004602	-	94	40.357	ENSDARG00000057890	si:dkey-33c12.4	88	40.174	Danio_rerio
ENSLACG00000004602	-	71	35.162	ENSDARG00000039082	zgc:123010	60	36.858	Danio_rerio
ENSLACG00000004602	-	61	37.861	ENSEBUG00000001368	-	96	31.687	Eptatretus_burgeri
ENSLACG00000004602	-	92	36.655	ENSELUG00000002009	si:dkey-33c12.4	88	40.483	Esox_lucius
ENSLACG00000004602	-	91	36.528	ENSELUG00000001633	-	91	33.882	Esox_lucius
ENSLACG00000004602	-	72	33.816	ENSELUG00000022008	zgc:123010	92	31.157	Esox_lucius
ENSLACG00000004602	-	66	35.714	ENSFHEG00000005521	si:dkey-33c12.4	90	30.263	Fundulus_heteroclitus
ENSLACG00000004602	-	65	40.099	ENSFHEG00000009983	-	77	34.232	Fundulus_heteroclitus
ENSLACG00000004602	-	72	34.063	ENSGMOG00000018473	zgc:123010	79	35.608	Gadus_morhua
ENSLACG00000004602	-	82	35.084	ENSGALG00000036747	TTC31	83	34.454	Gallus_gallus
ENSLACG00000004602	-	60	50.673	ENSGAFG00000016594	-	67	43.692	Gambusia_affinis
ENSLACG00000004602	-	59	36.313	ENSGAFG00000017596	si:dkey-33c12.4	52	35.674	Gambusia_affinis
ENSLACG00000004602	-	72	35.036	ENSGAFG00000009373	zgc:123010	91	31.450	Gambusia_affinis
ENSLACG00000004602	-	72	32.446	ENSGACG00000007620	zgc:123010	79	35.103	Gasterosteus_aculeatus
ENSLACG00000004602	-	59	36.585	ENSGACG00000004936	-	88	36.585	Gasterosteus_aculeatus
ENSLACG00000004602	-	72	33.412	ENSHBUG00000016720	-	91	30.189	Haplochromis_burtoni
ENSLACG00000004602	-	82	31.055	ENSHBUG00000010735	si:dkey-33c12.4	88	31.220	Haplochromis_burtoni
ENSLACG00000004602	-	92	38.433	ENSIPUG00000005998	si:dkey-33c12.4	89	36.649	Ictalurus_punctatus
ENSLACG00000004602	-	57	50.199	ENSKMAG00000006468	-	63	41.317	Kryptolebias_marmoratus
ENSLACG00000004602	-	72	36.253	ENSKMAG00000021350	zgc:123010	89	31.407	Kryptolebias_marmoratus
ENSLACG00000004602	-	60	35.977	ENSKMAG00000016610	si:dkey-33c12.4	53	36.311	Kryptolebias_marmoratus
ENSLACG00000004602	-	72	33.898	ENSLBEG00000013518	-	91	31.179	Labrus_bergylta
ENSLACG00000004602	-	91	34.229	ENSLBEG00000028046	-	83	32.799	Labrus_bergylta
ENSLACG00000004602	-	58	35.838	ENSLBEG00000021088	-	53	35.920	Labrus_bergylta
ENSLACG00000004602	-	72	36.983	ENSLBEG00000023984	zgc:123010	91	32.075	Labrus_bergylta
ENSLACG00000004602	-	72	34.856	ENSLOCG00000008967	zgc:123010	94	31.103	Lepisosteus_oculatus
ENSLACG00000004602	-	95	40.768	ENSLOCG00000001861	-	87	41.493	Lepisosteus_oculatus
ENSLACG00000004602	-	80	32.932	ENSMAMG00000000111	si:dkey-33c12.4	84	31.341	Mastacembelus_armatus
ENSLACG00000004602	-	59	37.758	ENSMAMG00000002377	-	69	37.758	Mastacembelus_armatus
ENSLACG00000004602	-	72	33.415	ENSMAMG00000002460	-	73	38.053	Mastacembelus_armatus
ENSLACG00000004602	-	72	34.307	ENSMAMG00000001145	zgc:123010	84	34.230	Mastacembelus_armatus
ENSLACG00000004602	-	63	40.355	ENSMAMG00000004311	-	77	35.742	Mastacembelus_armatus
ENSLACG00000004602	-	61	38.235	ENSMAMG00000003394	-	79	38.253	Mastacembelus_armatus
ENSLACG00000004602	-	59	37.879	ENSMAMG00000003439	-	80	37.879	Mastacembelus_armatus
ENSLACG00000004602	-	72	33.412	ENSMZEG00005014740	-	74	35.777	Maylandia_zebra
ENSLACG00000004602	-	57	45.263	ENSMZEG00005014276	si:dkey-33c12.4	88	31.169	Maylandia_zebra
ENSLACG00000004602	-	51	54.751	ENSMZEG00005000585	-	75	39.312	Maylandia_zebra
ENSLACG00000004602	-	74	34.679	ENSMZEG00005027733	zgc:123010	92	30.871	Maylandia_zebra
ENSLACG00000004602	-	72	33.333	ENSMMOG00000010544	zgc:123010	64	36.202	Mola_mola
ENSLACG00000004602	-	72	32.598	ENSMMOG00000017955	-	70	34.688	Mola_mola
ENSLACG00000004602	-	63	37.975	ENSMALG00000003167	-	87	32.877	Monopterus_albus
ENSLACG00000004602	-	72	36.010	ENSMALG00000017698	zgc:123010	92	31.215	Monopterus_albus
ENSLACG00000004602	-	60	36.620	ENSMALG00000002265	si:dkey-33c12.4	54	36.676	Monopterus_albus
ENSLACG00000004602	-	51	50.450	ENSONIG00000007538	-	88	41.912	Oreochromis_niloticus
ENSLACG00000004602	-	74	33.492	ENSONIG00000018353	zgc:123010	97	30.019	Oreochromis_niloticus
ENSLACG00000004602	-	60	37.500	ENSONIG00000012263	-	91	37.538	Oreochromis_niloticus
ENSLACG00000004602	-	58	35.000	ENSONIG00000000297	-	99	35.000	Oreochromis_niloticus
ENSLACG00000004602	-	58	37.209	ENSORLG00000029651	si:dkey-33c12.4	53	37.209	Oryzias_latipes
ENSLACG00000004602	-	65	51.452	ENSORLG00000030385	-	79	38.046	Oryzias_latipes
ENSLACG00000004602	-	66	34.973	ENSORLG00000007675	zgc:123010	87	30.720	Oryzias_latipes
ENSLACG00000004602	-	66	34.153	ENSORLG00020003457	zgc:123010	87	30.720	Oryzias_latipes_hni
ENSLACG00000004602	-	58	36.676	ENSORLG00020008750	si:dkey-33c12.4	50	37.209	Oryzias_latipes_hni
ENSLACG00000004602	-	61	47.170	ENSORLG00015008400	-	72	39.474	Oryzias_latipes_hsok
ENSLACG00000004602	-	75	34.112	ENSORLG00015008373	zgc:123010	91	30.930	Oryzias_latipes_hsok
ENSLACG00000004602	-	72	34.634	ENSOMEG00000003408	zgc:123010	58	36.607	Oryzias_melastigma
ENSLACG00000004602	-	89	36.890	ENSOMEG00000009428	-	86	35.791	Oryzias_melastigma
ENSLACG00000004602	-	71	35.381	ENSPKIG00000015521	zgc:123010	63	38.769	Paramormyrops_kingsleyae
ENSLACG00000004602	-	92	42.125	ENSPKIG00000011819	-	79	40.602	Paramormyrops_kingsleyae
ENSLACG00000004602	-	58	36.923	ENSPMAG00000004544	zgc:123010	99	36.308	Petromyzon_marinus
ENSLACG00000004602	-	72	35.766	ENSPFOG00000001073	zgc:123010	91	32.075	Poecilia_formosa
ENSLACG00000004602	-	66	40.625	ENSPFOG00000017092	-	94	37.607	Poecilia_formosa
ENSLACG00000004602	-	67	34.314	ENSPFOG00000009143	si:dkey-33c12.4	52	35.876	Poecilia_formosa
ENSLACG00000004602	-	72	35.766	ENSPLAG00000007711	zgc:123010	91	32.075	Poecilia_latipinna
ENSLACG00000004602	-	67	34.314	ENSPLAG00000022537	si:dkey-33c12.4	53	35.876	Poecilia_latipinna
ENSLACG00000004602	-	72	35.766	ENSPMEG00000005092	zgc:123010	91	31.887	Poecilia_mexicana
ENSLACG00000004602	-	52	50.901	ENSPMEG00000009905	-	65	41.040	Poecilia_mexicana
ENSLACG00000004602	-	67	34.314	ENSPMEG00000015590	si:dkey-33c12.4	52	35.876	Poecilia_mexicana
ENSLACG00000004602	-	63	38.356	ENSPREG00000019587	zgc:123010	66	46.207	Poecilia_reticulata
ENSLACG00000004602	-	52	52.252	ENSPREG00000016861	-	66	40.525	Poecilia_reticulata
ENSLACG00000004602	-	72	33.813	ENSPNYG00000023304	-	74	36.443	Pundamilia_nyererei
ENSLACG00000004602	-	74	34.917	ENSPNYG00000007893	zgc:123010	92	31.250	Pundamilia_nyererei
ENSLACG00000004602	-	57	45.263	ENSPNYG00000018262	si:dkey-33c12.4	88	31.169	Pundamilia_nyererei
ENSLACG00000004602	-	51	54.299	ENSPNYG00000001047	-	75	38.971	Pundamilia_nyererei
ENSLACG00000004602	-	99	36.627	ENSPNAG00000018386	si:dkey-33c12.4	88	36.752	Pygocentrus_nattereri
ENSLACG00000004602	-	75	35.392	ENSPNAG00000007579	zgc:123010	90	31.679	Pygocentrus_nattereri
ENSLACG00000004602	-	75	35.874	ENSSFOG00015009199	-	81	34.909	Scleropages_formosus
ENSLACG00000004602	-	78	32.563	ENSSFOG00015021394	zgc:123010	97	32.331	Scleropages_formosus
ENSLACG00000004602	-	71	43.216	ENSSFOG00015005186	-	90	38.021	Scleropages_formosus
ENSLACG00000004602	-	75	35.116	ENSSMAG00000002904	zgc:123010	97	30.427	Scophthalmus_maximus
ENSLACG00000004602	-	57	47.200	ENSSMAG00000010960	-	67	42.210	Scophthalmus_maximus
ENSLACG00000004602	-	72	33.907	ENSSMAG00000021096	-	88	30.469	Scophthalmus_maximus
ENSLACG00000004602	-	71	35.463	ENSSDUG00000010976	-	81	33.270	Seriola_dumerili
ENSLACG00000004602	-	72	35.280	ENSSDUG00000008651	zgc:123010	90	31.429	Seriola_dumerili
ENSLACG00000004602	-	92	32.790	ENSSDUG00000003213	si:dkey-33c12.4	94	31.879	Seriola_dumerili
ENSLACG00000004602	-	71	36.446	ENSSLDG00000012846	-	84	35.029	Seriola_lalandi_dorsalis
ENSLACG00000004602	-	91	32.370	ENSSLDG00000019386	zgc:123010	90	31.569	Seriola_lalandi_dorsalis
ENSLACG00000004602	-	72	34.475	ENSSLDG00000009448	si:dkey-33c12.4	88	32.264	Seriola_lalandi_dorsalis
ENSLACG00000004602	-	63	39.589	ENSSPAG00000004843	-	75	35.458	Stegastes_partitus
ENSLACG00000004602	-	60	37.255	ENSSPAG00000022577	-	86	31.509	Stegastes_partitus
ENSLACG00000004602	-	72	36.010	ENSSPAG00000013621	zgc:123010	92	31.343	Stegastes_partitus
ENSLACG00000004602	-	59	32.378	ENSTRUG00000022374	si:dkey-33c12.4	50	32.665	Takifugu_rubripes
ENSLACG00000004602	-	67	37.500	ENSTRUG00000000057	-	75	33.700	Takifugu_rubripes
ENSLACG00000004602	-	72	34.383	ENSTRUG00000024824	zgc:123010	89	31.298	Takifugu_rubripes
ENSLACG00000004602	-	59	36.202	ENSTNIG00000001303	zgc:123010	90	36.202	Tetraodon_nigroviridis
ENSLACG00000004602	-	59	36.086	ENSTNIG00000010542	-	88	36.086	Tetraodon_nigroviridis
ENSLACG00000004602	-	59	38.298	ENSXETG00000033896	-	99	38.298	Xenopus_tropicalis
ENSLACG00000004602	-	76	34.023	ENSXCOG00000012281	zgc:123010	71	36.765	Xiphophorus_couchianus
ENSLACG00000004602	-	72	35.036	ENSXMAG00000002598	zgc:123010	91	32.015	Xiphophorus_maculatus
ENSLACG00000004602	-	67	33.744	ENSXMAG00000018535	si:dkey-33c12.4	52	35.775	Xiphophorus_maculatus