EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLACG00000004640 (Gene tree)
Gene ID
102345713
Gene Symbol
PATL1
Alias
FLJ36874|Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Latimeria_chalumnae
Status
putative
Strand
Minus strand
Length
42918 bases
Position
chrJH128768.1:131741-174658
Accession
102345713
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLACP00000005222PAT1PF09770.95e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLACT00000005269PATL1-2012169XM_006010067ENSLACP00000005222723 (aa)-H3A6F1
Gene Model
Click here to download ENSLACG00000004640's gene model file
Pathways
Pathway IDPathway NameSource
lcm03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004640's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLACG00000004640PATL19956.680ENSG00000166889PATL19856.957Homo_sapiens
ENSLACG00000004640PATL15634.634ENSG00000229474PATL28936.503Homo_sapiens
ENSLACG00000004640PATL15653.922ENSAPOG00000021290patl19748.856Acanthochromis_polyacanthus
ENSLACG00000004640PATL16531.435ENSAPOG00000022988patl27330.337Acanthochromis_polyacanthus
ENSLACG00000004640PATL19956.274ENSAMEG00000014215PATL19856.883Ailuropoda_melanoleuca
ENSLACG00000004640PATL15632.518ENSAMEG00000014997PATL27532.099Ailuropoda_melanoleuca
ENSLACG00000004640PATL19747.036ENSACIG00000005182patl19847.294Amphilophus_citrinellus
ENSLACG00000004640PATL16431.183ENSAOCG00000023738patl25730.621Amphiprion_ocellaris
ENSLACG00000004640PATL15654.657ENSAOCG00000021993patl19546.632Amphiprion_ocellaris
ENSLACG00000004640PATL16430.753ENSAPEG00000011299patl26830.193Amphiprion_percula
ENSLACG00000004640PATL16183.871ENSAPEG00000021391patl17468.750Amphiprion_percula
ENSLACG00000004640PATL18778.788ENSATEG00000002230patl18152.280Anabas_testudineus
ENSLACG00000004640PATL16330.952ENSATEG00000019567patl26630.886Anabas_testudineus
ENSLACG00000004640PATL18830.585ENSAPLG00000003980PATL29831.484Anas_platyrhynchos
ENSLACG00000004640PATL17248.080ENSAPLG00000013394PATL19949.727Anas_platyrhynchos
ENSLACG00000004640PATL19957.494ENSACAG00000006607PATL19857.328Anolis_carolinensis
ENSLACG00000004640PATL19956.680ENSANAG00000023078PATL19856.957Aotus_nancymaae
ENSLACG00000004640PATL16431.423ENSACLG00000010326patl26030.786Astatotilapia_calliptera
ENSLACG00000004640PATL16368.750ENSACLG00000005144patl17565.385Astatotilapia_calliptera
ENSLACG00000004640PATL18755.392ENSAMXG00000010731patl19748.201Astyanax_mexicanus
ENSLACG00000004640PATL16431.064ENSAMXG00000020293patl26331.356Astyanax_mexicanus
ENSLACG00000004640PATL19957.124ENSBTAG00000005913PATL19857.792Bos_taurus
ENSLACG00000004640PATL19956.516ENSCJAG00000016192PATL19857.050Callithrix_jacchus
ENSLACG00000004640PATL19956.533ENSCAFG00000007581PATL19857.143Canis_familiaris
ENSLACG00000004640PATL15633.333ENSCAFG00000013629PATL27233.333Canis_familiaris
ENSLACG00000004640PATL19956.771ENSCAFG00020001648PATL19957.386Canis_lupus_dingo
ENSLACG00000004640PATL15633.333ENSCAFG00020022169PATL27233.333Canis_lupus_dingo
ENSLACG00000004640PATL16033.941ENSCHIG00000026665PATL27433.415Capra_hircus
ENSLACG00000004640PATL19956.088ENSCHIG00000025913PATL19856.753Capra_hircus
ENSLACG00000004640PATL19956.527ENSTSYG00000012748PATL19457.068Carlito_syrichta
ENSLACG00000004640PATL19955.974ENSCAPG00000013668PATL19856.527Cavia_aperea
ENSLACG00000004640PATL19954.974ENSCPOG00000006827PATL19855.357Cavia_porcellus
ENSLACG00000004640PATL19956.809ENSCCAG00000023759PATL19857.087Cebus_capucinus
ENSLACG00000004640PATL19956.550ENSCATG00000009629PATL19856.827Cercocebus_atys
ENSLACG00000004640PATL19955.020ENSCLAG00000003427PATL19955.556Chinchilla_lanigera
ENSLACG00000004640PATL19155.870ENSCSAG00000006095PATL19956.454Chlorocebus_sabaeus
ENSLACG00000004640PATL16866.216ENSCHOG00000001611PATL18163.953Choloepus_hoffmanni
ENSLACG00000004640PATL19956.680ENSCANG00000039197PATL19856.957Colobus_angolensis_palliatus
ENSLACG00000004640PATL15634.634ENSCANG00000013856PATL27234.236Colobus_angolensis_palliatus
ENSLACG00000004640PATL19956.161ENSCGRG00001024927Patl19856.697Cricetulus_griseus_chok1gshd
ENSLACG00000004640PATL19956.161ENSCGRG00000000461Patl19956.697Cricetulus_griseus_crigri
ENSLACG00000004640PATL19451.515ENSCSEG00000008261patl18352.313Cynoglossus_semilaevis
ENSLACG00000004640PATL15651.589ENSCVAG00000006664patl19845.801Cyprinodon_variegatus
ENSLACG00000004640PATL19746.506ENSDARG00000017423patl19846.271Danio_rerio
ENSLACG00000004640PATL17233.078ENSDARG00000089567patl26733.270Danio_rerio
ENSLACG00000004640PATL19953.101ENSDNOG00000038865PATL19956.498Dasypus_novemcinctus
ENSLACG00000004640PATL15333.766ENSDORG00000026649Patl27232.552Dipodomys_ordii
ENSLACG00000004640PATL19956.420ENSDORG00000000237Patl19856.697Dipodomys_ordii
ENSLACG00000004640PATL19956.016ENSEASG00005007963PATL19856.680Equus_asinus_asinus
ENSLACG00000004640PATL19956.193ENSECAG00000011411PATL19856.680Equus_caballus
ENSLACG00000004640PATL19448.947ENSELUG00000024249patl19745.018Esox_lucius
ENSLACG00000004640PATL16431.183ENSELUG00000023244patl26031.263Esox_lucius
ENSLACG00000004640PATL19956.477ENSFCAG00000015573PATL19857.087Felis_catus
ENSLACG00000004640PATL15633.580ENSFCAG00000027170PATL27233.580Felis_catus
ENSLACG00000004640PATL19957.867ENSFALG00000012150PATL19857.867Ficedula_albicollis
ENSLACG00000004640PATL15531.358ENSFDAG00000012242PATL27532.346Fukomys_damarensis
ENSLACG00000004640PATL19955.829ENSFDAG00000016128PATL19956.104Fukomys_damarensis
ENSLACG00000004640PATL16370.833ENSFHEG00000017790patl17870.833Fundulus_heteroclitus
ENSLACG00000004640PATL19956.675ENSGALG00000042641PATL19956.675Gallus_gallus
ENSLACG00000004640PATL16732.245ENSGALG00000002167PATL26032.115Gallus_gallus
ENSLACG00000004640PATL16466.071ENSGAFG00000006508patl17866.071Gambusia_affinis
ENSLACG00000004640PATL16432.258ENSGAFG00000019344patl26232.688Gambusia_affinis
ENSLACG00000004640PATL19946.015ENSGACG00000016448patl19848.182Gasterosteus_aculeatus
ENSLACG00000004640PATL19957.935ENSGAGG00000004461PATL19956.821Gopherus_agassizii
ENSLACG00000004640PATL15634.390ENSGGOG00000025923PATL27134.390Gorilla_gorilla
ENSLACG00000004640PATL19956.680ENSGGOG00000004335PATL19856.957Gorilla_gorilla
ENSLACG00000004640PATL16430.638ENSHBUG00000005929patl26830.638Haplochromis_burtoni
ENSLACG00000004640PATL16368.750ENSHBUG00000005365patl17565.385Haplochromis_burtoni
ENSLACG00000004640PATL19955.829ENSHGLG00000018173PATL19856.234Heterocephalus_glaber_female
ENSLACG00000004640PATL15532.282ENSHGLG00000017415-7633.090Heterocephalus_glaber_female
ENSLACG00000004640PATL19955.195ENSHGLG00100003453PATL19955.729Heterocephalus_glaber_male
ENSLACG00000004640PATL18973.469ENSHCOG00000001898patl17569.811Hippocampus_comes
ENSLACG00000004640PATL17030.664ENSHCOG00000016754patl26531.128Hippocampus_comes
ENSLACG00000004640PATL16132.071ENSIPUG00000020692patl25832.151Ictalurus_punctatus
ENSLACG00000004640PATL19956.883ENSSTOG00000013764PATL19957.422Ictidomys_tridecemlineatus
ENSLACG00000004640PATL15632.688ENSSTOG00000033848PATL27132.767Ictidomys_tridecemlineatus
ENSLACG00000004640PATL19956.161ENSJJAG00000010135Patl19956.697Jaculus_jaculus
ENSLACG00000004640PATL16430.753ENSKMAG00000021275patl25930.753Kryptolebias_marmoratus
ENSLACG00000004640PATL16083.333ENSKMAG00000020848patl17668.750Kryptolebias_marmoratus
ENSLACG00000004640PATL16331.398ENSLBEG00000022344patl25831.398Labrus_bergylta
ENSLACG00000004640PATL19255.882ENSLBEG00000023617patl17755.882Labrus_bergylta
ENSLACG00000004640PATL19746.976ENSLOCG00000000717patl19748.092Lepisosteus_oculatus
ENSLACG00000004640PATL15531.852ENSLAFG00000031124PATL27431.931Loxodonta_africana
ENSLACG00000004640PATL19956.550ENSLAFG00000015161PATL19856.957Loxodonta_africana
ENSLACG00000004640PATL19956.550ENSMFAG00000040851PATL19856.827Macaca_fascicularis
ENSLACG00000004640PATL19956.550ENSMMUG00000017287PATL19856.827Macaca_mulatta
ENSLACG00000004640PATL19956.550ENSMNEG00000038692PATL19856.827Macaca_nemestrina
ENSLACG00000004640PATL19956.550ENSMLEG00000030044PATL19856.827Mandrillus_leucophaeus
ENSLACG00000004640PATL16330.197ENSMAMG00000013327patl26630.197Mastacembelus_armatus
ENSLACG00000004640PATL18780.645ENSMAMG00000003950patl19846.947Mastacembelus_armatus
ENSLACG00000004640PATL16368.750ENSMZEG00005013404patl17565.385Maylandia_zebra
ENSLACG00000004640PATL16431.423ENSMZEG00005014292patl26030.786Maylandia_zebra
ENSLACG00000004640PATL19255.042ENSMGAG00000003406PATL19855.462Meleagris_gallopavo
ENSLACG00000004640PATL18830.594ENSMGAG00000001309PATL29831.507Meleagris_gallopavo
ENSLACG00000004640PATL18866.458ENSMAUG00000012059Patl19766.458Mesocricetus_auratus
ENSLACG00000004640PATL19953.846ENSMICG00000004172PATL19657.962Microcebus_murinus
ENSLACG00000004640PATL19956.550ENSMOCG00000010087Patl19857.087Microtus_ochrogaster
ENSLACG00000004640PATL19946.269ENSMMOG00000013711patl19846.206Mola_mola
ENSLACG00000004640PATL19958.518ENSMODG00000020201PATL19858.355Monodelphis_domestica
ENSLACG00000004640PATL16033.110ENSMODG00000017690PATL27132.692Monodelphis_domestica
ENSLACG00000004640PATL18155.851ENSMALG00000018706patl19161.300Monopterus_albus
ENSLACG00000004640PATL19956.291MGP_CAROLIEiJ_G0022739Patl19856.827Mus_caroli
ENSLACG00000004640PATL19956.291ENSMUSG00000046139Patl19856.827Mus_musculus
ENSLACG00000004640PATL19956.420MGP_PahariEiJ_G0014233Patl19856.957Mus_pahari
ENSLACG00000004640PATL19956.291MGP_SPRETEiJ_G0023652Patl19856.827Mus_spretus
ENSLACG00000004640PATL19956.662ENSMPUG00000014607PATL19857.013Mustela_putorius_furo
ENSLACG00000004640PATL19954.734ENSMLUG00000011169PATL19855.686Myotis_lucifugus
ENSLACG00000004640PATL19955.584ENSNGAG00000003682Patl19856.510Nannospalax_galili
ENSLACG00000004640PATL16430.638ENSNBRG00000011745patl26430.361Neolamprologus_brichardi
ENSLACG00000004640PATL19956.069ENSNLEG00000013081PATL19955.805Nomascus_leucogenys
ENSLACG00000004640PATL15633.661ENSNLEG00000005673PATL27233.990Nomascus_leucogenys
ENSLACG00000004640PATL16467.761ENSMEUG00000009391PATL17789.286Notamacropus_eugenii
ENSLACG00000004640PATL15964.897ENSOPRG00000007963PATL16665.361Ochotona_princeps
ENSLACG00000004640PATL17058.400ENSODEG00000001792PATL19658.800Octodon_degus
ENSLACG00000004640PATL16431.210ENSONIG00000011519patl26031.290Oreochromis_niloticus
ENSLACG00000004640PATL16368.750ENSONIG00000004170patl19847.867Oreochromis_niloticus
ENSLACG00000004640PATL15332.997ENSOANG00000001538-8433.586Ornithorhynchus_anatinus
ENSLACG00000004640PATL19956.975ENSOCUG00000002156PATL19857.516Oryctolagus_cuniculus
ENSLACG00000004640PATL16630.972ENSORLG00000005780patl26430.909Oryzias_latipes
ENSLACG00000004640PATL16631.174ENSORLG00020016506patl26231.111Oryzias_latipes_hni
ENSLACG00000004640PATL16631.174ENSORLG00015014500patl26431.111Oryzias_latipes_hsok
ENSLACG00000004640PATL16365.385ENSORLG00015022240patl18065.385Oryzias_latipes_hsok
ENSLACG00000004640PATL16630.894ENSOMEG00000021628patl26630.426Oryzias_melastigma
ENSLACG00000004640PATL19956.939ENSOGAG00000004351PATL19857.217Otolemur_garnettii
ENSLACG00000004640PATL15932.715ENSOARG00000003762PATL27232.506Ovis_aries
ENSLACG00000004640PATL19955.829ENSOARG00000012005PATL19556.494Ovis_aries
ENSLACG00000004640PATL19956.680ENSPPAG00000034275PATL19856.957Pan_paniscus
ENSLACG00000004640PATL15634.550ENSPPAG00000007221PATL27134.793Pan_paniscus
ENSLACG00000004640PATL19956.477ENSPPRG00000020639PATL19957.087Panthera_pardus
ENSLACG00000004640PATL15633.333ENSPPRG00000004279PATL27233.333Panthera_pardus
ENSLACG00000004640PATL19956.477ENSPTIG00000019298PATL19857.087Panthera_tigris_altaica
ENSLACG00000004640PATL15633.086ENSPTIG00000018964PATL27233.086Panthera_tigris_altaica
ENSLACG00000004640PATL15634.634ENSPTRG00000041536PATL27134.634Pan_troglodytes
ENSLACG00000004640PATL19954.594ENSPTRG00000003697PATL19854.873Pan_troglodytes
ENSLACG00000004640PATL19956.550ENSPANG00000035620PATL19856.827Papio_anubis
ENSLACG00000004640PATL19745.677ENSPKIG00000016224patl19746.616Paramormyrops_kingsleyae
ENSLACG00000004640PATL15430.827ENSPSIG00000017690PATL25135.915Pelodiscus_sinensis
ENSLACG00000004640PATL19958.085ENSPSIG00000016206PATL19457.439Pelodiscus_sinensis
ENSLACG00000004640PATL16370.833ENSPMGG00000002644patl18070.833Periophthalmus_magnuspinnatus
ENSLACG00000004640PATL16330.501ENSPMGG00000014550patl26730.283Periophthalmus_magnuspinnatus
ENSLACG00000004640PATL19956.291ENSPEMG00000014215Patl19956.957Peromyscus_maniculatus_bairdii
ENSLACG00000004640PATL15433.000ENSPCIG00000018256PATL27632.494Phascolarctos_cinereus
ENSLACG00000004640PATL19958.323ENSPCIG00000010852PATL19857.902Phascolarctos_cinereus
ENSLACG00000004640PATL16432.328ENSPFOG00000007305patl26032.258Poecilia_formosa
ENSLACG00000004640PATL18170.833ENSPFOG00000007768patl17767.273Poecilia_formosa
ENSLACG00000004640PATL16370.833ENSPLAG00000018465patl17867.273Poecilia_latipinna
ENSLACG00000004640PATL16432.328ENSPLAG00000020713patl26032.258Poecilia_latipinna
ENSLACG00000004640PATL19067.273ENSPMEG00000006555patl17867.273Poecilia_mexicana
ENSLACG00000004640PATL16432.328ENSPMEG00000018942patl26032.258Poecilia_mexicana
ENSLACG00000004640PATL15131.267ENSPREG00000023066patl25631.183Poecilia_reticulata
ENSLACG00000004640PATL17868.750ENSPREG00000003874patl17368.750Poecilia_reticulata
ENSLACG00000004640PATL19956.939ENSPPYG00000003230PATL19857.217Pongo_abelii
ENSLACG00000004640PATL15634.719ENSPCOG00000000295PATL28937.195Propithecus_coquereli
ENSLACG00000004640PATL19957.069ENSPCOG00000020770PATL19857.347Propithecus_coquereli
ENSLACG00000004640PATL18557.296ENSPVAG00000015239PATL19857.253Pteropus_vampyrus
ENSLACG00000004640PATL16868.750ENSPNYG00000018936patl19460.991Pundamilia_nyererei
ENSLACG00000004640PATL16430.638ENSPNYG00000017381patl26830.426Pundamilia_nyererei
ENSLACG00000004640PATL19746.523ENSPNAG00000017907patl19747.302Pygocentrus_nattereri
ENSLACG00000004640PATL16431.906ENSPNAG00000002315patl26331.635Pygocentrus_nattereri
ENSLACG00000004640PATL19956.057ENSRNOG00000021052Patl19856.460Rattus_norvegicus
ENSLACG00000004640PATL19953.680ENSRBIG00000032263PATL19853.817Rhinopithecus_bieti
ENSLACG00000004640PATL19956.291ENSRROG00000032861PATL19856.827Rhinopithecus_roxellana
ENSLACG00000004640PATL19956.827ENSSBOG00000025195PATL19856.957Saimiri_boliviensis_boliviensis
ENSLACG00000004640PATL19957.692ENSSHAG00000004309PATL19857.272Sarcophilus_harrisii
ENSLACG00000004640PATL18983.871ENSSFOG00015009614patl18276.923Scleropages_formosus
ENSLACG00000004640PATL18968.085ENSSMAG00000009482patl17754.930Scophthalmus_maximus
ENSLACG00000004640PATL16430.490ENSSMAG00000017262patl26930.652Scophthalmus_maximus
ENSLACG00000004640PATL16431.557ENSSDUG00000022927patl26031.277Seriola_dumerili
ENSLACG00000004640PATL18970.833ENSSDUG00000005362patl17370.833Seriola_dumerili
ENSLACG00000004640PATL16331.522ENSSLDG00000017922patl26431.739Seriola_lalandi_dorsalis
ENSLACG00000004640PATL18968.750ENSSLDG00000019146patl17368.750Seriola_lalandi_dorsalis
ENSLACG00000004640PATL15533.911ENSSARG00000009047PATL27932.921Sorex_araneus
ENSLACG00000004640PATL18159.551ENSSARG00000009600PATL17859.551Sorex_araneus
ENSLACG00000004640PATL19958.540ENSSPUG00000009453PATL19858.094Sphenodon_punctatus
ENSLACG00000004640PATL17131.335ENSSPAG00000004784patl27331.141Stegastes_partitus
ENSLACG00000004640PATL15654.657ENSSPAG00000003187patl19846.977Stegastes_partitus
ENSLACG00000004640PATL19956.347ENSSSCG00000013124PATL19857.143Sus_scrofa
ENSLACG00000004640PATL19957.772ENSTGUG00000006222PATL19957.772Taeniopygia_guttata
ENSLACG00000004640PATL19068.750ENSTRUG00000000709patl17568.750Takifugu_rubripes
ENSLACG00000004640PATL18352.987ENSTBEG00000000796PATL17667.480Tupaia_belangeri
ENSLACG00000004640PATL16564.602ENSTTRG00000009389PATL17364.759Tursiops_truncatus
ENSLACG00000004640PATL15633.007ENSUAMG00000018533PATL27132.593Ursus_americanus
ENSLACG00000004640PATL19956.250ENSUMAG00000018634PATL19957.124Ursus_maritimus
ENSLACG00000004640PATL15632.593ENSUMAG00000007738PATL27132.593Ursus_maritimus
ENSLACG00000004640PATL15868.293ENSVPAG00000009224PATL16468.293Vicugna_pacos
ENSLACG00000004640PATL19956.792ENSVVUG00000016668PATL19956.799Vulpes_vulpes
ENSLACG00000004640PATL15634.152ENSVVUG00000011576PATL27234.152Vulpes_vulpes
ENSLACG00000004640PATL15633.495ENSXETG00000014167patl28731.570Xenopus_tropicalis
ENSLACG00000004640PATL16366.667ENSXCOG00000010808patl19766.667Xiphophorus_couchianus
ENSLACG00000004640PATL16368.750ENSXMAG00000013834patl17865.455Xiphophorus_maculatus
ENSLACG00000004640PATL16332.251ENSXMAG00000018464patl26032.181Xiphophorus_maculatus

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