EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004689 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1187 bases
Position: chrJH129874.1:134574-135760
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005277	zf-CCHC	PF00098.23	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005324	-	1071	-	ENSLACP00000005277	357 (aa)	-	H3A6K6

Gene Model

Click here to download ENSLACG00000004689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004689's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004689	-	90	54.848	ENSLACG00000004000	-	99	54.848
ENSLACG00000004689	-	90	50.909	ENSLACG00000004531	-	98	50.909
ENSLACG00000004689	-	94	52.023	ENSLACG00000002057	-	99	52.586
ENSLACG00000004689	-	68	61.789	ENSLACG00000012373	-	82	61.789
ENSLACG00000004689	-	85	55.663	ENSLACG00000005078	-	100	55.663
ENSLACG00000004689	-	92	54.518	ENSLACG00000017942	-	99	54.518
ENSLACG00000004689	-	82	51.645	ENSLACG00000012908	-	100	51.645
ENSLACG00000004689	-	100	50.416	ENSLACG00000002363	-	85	50.416
ENSLACG00000004689	-	93	48.387	ENSLACG00000002836	-	99	48.387
ENSLACG00000004689	-	92	54.819	ENSLACG00000006128	-	99	54.819
ENSLACG00000004689	-	82	50.847	ENSLACG00000010543	-	100	50.847
ENSLACG00000004689	-	94	53.216	ENSLACG00000008039	-	100	53.216
ENSLACG00000004689	-	100	56.233	ENSLACG00000002768	-	93	56.233
ENSLACG00000004689	-	94	54.734	ENSLACG00000000325	-	99	54.734

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004689	-	66	46.415	ENSCPBG00000028243	-	85	46.415	Chrysemys_picta_bellii
ENSLACG00000004689	-	52	43.216	ENSGAGG00000002892	-	93	43.216	Gopherus_agassizii
ENSLACG00000004689	-	100	42.547	ENSXETG00000026538	-	88	42.547	Xenopus_tropicalis
ENSLACG00000004689	-	99	45.355	ENSXETG00000019379	-	89	45.380	Xenopus_tropicalis
ENSLACG00000004689	-	99	44.414	ENSXETG00000006819	-	82	44.444	Xenopus_tropicalis
ENSLACG00000004689	-	99	44.077	ENSXETG00000005082	ankrd31	89	44.444	Xenopus_tropicalis