EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004732 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 1062 bases
Position: chrJH127224.1:136171-137232
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005323	RVT_1	PF00078.27	7.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005370	-	1005	-	ENSLACP00000005323	335 (aa)	-	H3A6Q2

Gene Model

Click here to download ENSLACG00000004732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004732	-	61	60.811	ENSLACG00000000029	-	62	60.811
ENSLACG00000004732	-	63	30.698	ENSLACG00000011328	-	91	30.698
ENSLACG00000004732	-	92	31.329	ENSLACG00000009347	-	50	31.329
ENSLACG00000004732	-	60	50.249	ENSLACG00000000981	-	91	50.249
ENSLACG00000004732	-	56	42.105	ENSLACG00000000714	-	87	42.353
ENSLACG00000004732	-	67	31.858	ENSLACG00000010373	-	90	31.858
ENSLACG00000004732	-	64	32.895	ENSLACG00000005904	-	78	32.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004732	-	65	31.818	ENSACLG00000021935	-	73	31.818	Astatotilapia_calliptera
ENSLACG00000004732	-	58	31.336	ENSACLG00000006798	-	69	32.258	Astatotilapia_calliptera
ENSLACG00000004732	-	90	33.333	ENSACLG00000020385	-	52	33.333	Astatotilapia_calliptera
ENSLACG00000004732	-	53	30.682	ENSACLG00000010403	-	56	30.682	Astatotilapia_calliptera
ENSLACG00000004732	-	64	30.252	ENSACLG00000006549	-	65	30.252	Astatotilapia_calliptera
ENSLACG00000004732	-	92	32.484	ENSCPBG00000001369	-	56	32.484	Chrysemys_picta_bellii
ENSLACG00000004732	-	56	31.925	ENSCPBG00000001687	-	71	31.925	Chrysemys_picta_bellii
ENSLACG00000004732	-	58	32.273	ENSGAFG00000008149	-	76	32.273	Gambusia_affinis
ENSLACG00000004732	-	93	32.588	ENSGAGG00000013650	-	56	32.588	Gopherus_agassizii
ENSLACG00000004732	-	92	30.330	ENSMZEG00005017878	-	51	30.330	Maylandia_zebra
ENSLACG00000004732	-	59	31.658	ENSMALG00000005075	-	62	31.658	Monopterus_albus
ENSLACG00000004732	-	59	33.163	ENSNBRG00000002791	-	63	33.163	Neolamprologus_brichardi
ENSLACG00000004732	-	61	30.732	ENSORLG00000026658	-	83	30.732	Oryzias_latipes
ENSLACG00000004732	-	56	35.829	ENSORLG00020002705	-	59	35.829	Oryzias_latipes_hni
ENSLACG00000004732	-	56	34.928	ENSOMEG00000007764	-	71	34.928	Oryzias_melastigma
ENSLACG00000004732	-	94	31.845	ENSOMEG00000013479	-	55	31.845	Oryzias_melastigma
ENSLACG00000004732	-	94	31.765	ENSPSIG00000000193	-	67	31.765	Pelodiscus_sinensis
ENSLACG00000004732	-	99	30.618	ENSPSIG00000001800	-	78	30.618	Pelodiscus_sinensis
ENSLACG00000004732	-	82	41.017	ENSPSIG00000001136	-	60	41.017	Pelodiscus_sinensis
ENSLACG00000004732	-	96	31.395	ENSPSIG00000001205	-	74	31.395	Pelodiscus_sinensis
ENSLACG00000004732	-	53	33.520	ENSPSIG00000001531	-	93	33.520	Pelodiscus_sinensis
ENSLACG00000004732	-	96	30.836	ENSPSIG00000001197	-	84	30.836	Pelodiscus_sinensis
ENSLACG00000004732	-	99	30.618	ENSPSIG00000000367	-	80	30.618	Pelodiscus_sinensis
ENSLACG00000004732	-	96	31.498	ENSPSIG00000000226	-	62	31.498	Pelodiscus_sinensis
ENSLACG00000004732	-	70	31.489	ENSPSIG00000014032	-	69	31.489	Pelodiscus_sinensis
ENSLACG00000004732	-	58	31.980	ENSPSIG00000001816	-	73	31.980	Pelodiscus_sinensis
ENSLACG00000004732	-	79	30.566	ENSPNYG00000004598	-	88	30.566	Pundamilia_nyererei
ENSLACG00000004732	-	65	31.381	ENSSFOG00015015399	-	69	31.381	Scleropages_formosus
ENSLACG00000004732	-	64	34.529	ENSTGUG00000018474	-	96	34.529	Taeniopygia_guttata
ENSLACG00000004732	-	65	33.778	ENSTGUG00000018141	-	91	33.778	Taeniopygia_guttata
ENSLACG00000004732	-	65	33.778	ENSTGUG00000018469	-	98	33.778	Taeniopygia_guttata
ENSLACG00000004732	-	65	33.778	ENSTGUG00000018372	-	98	33.778	Taeniopygia_guttata
ENSLACG00000004732	-	64	31.780	ENSTRUG00000024970	-	76	31.780	Takifugu_rubripes
ENSLACG00000004732	-	69	31.765	ENSXMAG00000027711	-	75	31.765	Xiphophorus_maculatus