EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLACG00000004746 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Latimeria_chalumnae
Status: putative
Strand: Minus strand
Length: 64569 bases
Position: chrJH129668.1:136796-201364
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLACP00000005337	PARP	PF00644.20	1.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLACT00000005384	-	4053	-	ENSLACP00000005337	1350 (aa)	-	H3A6R6

Gene Model

Click here to download ENSLACG00000004746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLACG00000004746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLACG00000004746	-	54	31.250	ENSLACG00000012572	PARP9	71	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLACG00000004746	-	57	43.496	ENSACLG00000005418	-	99	43.496	Astatotilapia_calliptera
ENSLACG00000004746	-	82	43.350	ENSBTAG00000016656	PARP14	73	43.350	Bos_taurus
ENSLACG00000004746	-	74	30.000	ENSCPOG00000020020	PARP14	59	30.000	Cavia_porcellus
ENSLACG00000004746	-	74	33.143	ENSCHOG00000010569	PARP14	55	33.143	Choloepus_hoffmanni
ENSLACG00000004746	-	90	31.343	ENSETEG00000002790	PARP14	74	31.343	Echinops_telfairi
ENSLACG00000004746	-	59	44.949	ENSEBUG00000002611	-	94	44.949	Eptatretus_burgeri
ENSLACG00000004746	-	92	33.504	ENSELUG00000009798	si:ch211-219a4.3	71	33.504	Esox_lucius
ENSLACG00000004746	-	54	41.429	ENSGMOG00000011231	-	94	41.429	Gadus_morhua
ENSLACG00000004746	-	60	31.049	ENSGAFG00000009879	si:ch211-219a4.3	99	31.274	Gambusia_affinis
ENSLACG00000004746	-	59	47.030	ENSGACG00000002353	si:ch211-219a4.3	99	47.030	Gasterosteus_aculeatus
ENSLACG00000004746	-	73	34.891	ENSKMAG00000016827	-	73	40.291	Kryptolebias_marmoratus
ENSLACG00000004746	-	86	31.828	ENSMAMG00000012417	si:ch211-219a4.3	75	32.444	Mastacembelus_armatus
ENSLACG00000004746	-	60	30.274	ENSMZEG00005025678	si:ch211-219a4.3	99	30.674	Maylandia_zebra
ENSLACG00000004746	-	74	31.397	ENSMOCG00000021121	Parp14	59	31.397	Microtus_ochrogaster
ENSLACG00000004746	-	70	30.413	ENSMMOG00000005282	-	98	30.413	Mola_mola
ENSLACG00000004746	-	60	32.133	ENSOPRG00000013872	PARP14	52	32.133	Ochotona_princeps
ENSLACG00000004746	-	59	47.805	ENSONIG00000004517	-	98	47.805	Oreochromis_niloticus
ENSLACG00000004746	-	60	30.725	ENSORLG00000008781	-	100	30.725	Oryzias_latipes
ENSLACG00000004746	-	98	32.658	ENSORLG00015021971	si:ch211-219a4.3	89	47.761	Oryzias_latipes_hsok
ENSLACG00000004746	-	60	31.250	ENSOMEG00000019715	si:ch211-219a4.3	91	45.588	Oryzias_melastigma
ENSLACG00000004746	-	55	30.500	ENSPKIG00000004027	-	91	30.435	Paramormyrops_kingsleyae
ENSLACG00000004746	-	53	30.914	ENSPMAG00000009649	-	99	30.914	Petromyzon_marinus
ENSLACG00000004746	-	59	40.291	ENSPMAG00000008296	-	96	40.291	Petromyzon_marinus
ENSLACG00000004746	-	61	40.550	ENSPMAG00000001173	-	50	40.550	Petromyzon_marinus
ENSLACG00000004746	-	60	33.129	ENSPREG00000019242	-	98	45.000	Poecilia_reticulata
ENSLACG00000004746	-	74	30.106	ENSPVAG00000012722	PARP14	62	30.154	Pteropus_vampyrus
ENSLACG00000004746	-	53	54.545	ENSPNYG00000001714	-	87	50.000	Pundamilia_nyererei
ENSLACG00000004746	-	60	30.842	ENSPNYG00000013937	-	99	32.438	Pundamilia_nyererei
ENSLACG00000004746	-	93	42.079	ENSSFOG00015001605	-	92	53.595	Scleropages_formosus
ENSLACG00000004746	-	93	31.902	ENSSARG00000011299	PARP14	76	31.902	Sorex_araneus
ENSLACG00000004746	-	60	30.220	ENSTRUG00000004579	-	89	47.030	Takifugu_rubripes
ENSLACG00000004746	-	73	46.040	ENSVPAG00000002158	PARP14	59	46.040	Vicugna_pacos
ENSLACG00000004746	-	91	35.369	ENSVVUG00000022533	PARP14	71	35.369	Vulpes_vulpes
ENSLACG00000004746	-	68	44.693	ENSXETG00000023400	-	96	44.693	Xenopus_tropicalis
ENSLACG00000004746	-	59	53.247	ENSXCOG00000014707	-	87	53.247	Xiphophorus_couchianus
ENSLACG00000004746	-	71	33.813	ENSXMAG00000016244	-	60	32.808	Xiphophorus_maculatus